CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040221.1-P	Field mustard	nucleus	99.52	99.52
AT3G06400.3	Thale cress	nucleus	95.23	94.51
CDY24695	Canola	nucleus	94.85	94.49
CDY47176	Canola	cytosol	42.23	93.46
CDY05261	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	94.95	87.91
CDY13907	Canola	nucleus	87.51	86.69
KRH21031	Soybean	nucleus	87.99	86.5
KRH11241	Soybean	nucleus	88.27	86.38
CDX92595	Canola	nucleus	73.4	86.13
KRH50913	Soybean	nucleus	86.56	85.82
VIT_05s0020g01780.t01	Wine grape	nucleus	88.08	85.56
KRH02212	Soybean	nucleus	85.99	85.17
PGSC0003DMT400058376	Potato	nucleus	85.51	84.3
Solyc01g067390.2.1	Tomato	nucleus	85.51	84.23
PGSC0003DMT400079102	Potato	nucleus	84.56	83.84
Solyc06g054560.2.1	Tomato	nucleus	84.46	83.51
CDY02609	Canola	nucleus	82.08	81.61
GSMUA_Achr8P09960_001	Banana	nucleus	84.08	81.59
GSMUA_Achr3P23910_001	Banana	nucleus	81.6	80.07
KXG32501	Sorghum	nucleus	83.32	78.95
Os01t0367900-01	Rice	nucleus	83.13	78.77
TraesCS1D01G099600.1	Wheat	nucleus	82.55	78.23
TraesCS1B01G118900.2	Wheat	nucleus	82.46	78.21
TraesCS1A01G091100.1	Wheat	nucleus	82.17	77.94
Zm00001d040831_P021	Maize	nucleus	83.03	77.77
Zm00001d009312_P028	Maize	nucleus	83.6	77.61
Os05t0150300-01	Rice	nucleus	82.84	75.04
TraesCS3D01G068900.1	Wheat	nucleus	78.36	73.33
HORVU1Hr1G021540.17	Barley	plasma membrane	82.36	73.16
TraesCS3B01G083400.1	Wheat	nucleus	78.93	73.02
TraesCS3A01G069900.2	Wheat	nucleus	78.36	72.74
HORVU3Hr1G012850.1	Barley	nucleus	77.79	72.02
CDY30755	Canola	cytosol	26.41	35.79
CDY53848	Canola	cytosol	26.22	35.67
CDY57125	Canola	cytosol	25.64	35.12
CDX81370	Canola	cytosol	25.64	35.12
CDY18840	Canola	nucleus	27.93	27.05
CDY18960	Canola	cytosol	22.02	26.58
CDX74702	Canola	cytosol	21.83	26.32
CDY04120	Canola	cytosol	19.07	26.32
CDY48619	Canola	nucleus, plastid	19.07	26.14
CDX75208	Canola	cytosol	25.74	22.58
CDX68802	Canola	cytosol	25.93	22.41
CDY56279	Canola	cytosol	27.07	21.15
CDX76767	Canola	cytosol, nucleus, plastid	27.45	20.93
CDX81444	Canola	nucleus	32.6	20.2
CDY37209	Canola	nucleus	32.32	20.11
CDY67658	Canola	cytosol, nucleus	20.31	18.87
CDY68094	Canola	nucleus	20.59	17.32
CDY30994	Canola	nucleus	10.3	16.88
CDX72050	Canola	cytosol	22.78	16.23
CDX95673	Canola	cytosol	14.97	15.96
CDX88940	Canola	nucleus	23.83	15.11
CDY08401	Canola	nucleus	26.98	14.11
CDY52874	Canola	nucleus	27.07	14.08
CDY37083	Canola	plastid	26.22	13.04
CDY27338	Canola	nucleus, plastid	26.12	13.02
CDX83383	Canola	nucleus, plastid	26.31	12.93
CDY06115	Canola	nucleus	22.88	12.75
CDY14410	Canola	nucleus	27.36	11.47
CDY07678	Canola	nucleus	27.26	10.41
CDX95672	Canola	plastid	7.25	7.04
CDY71637	Canola	nucleus	2.19	3.11

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.1040.30	Gene3D:1.20.5.1190	MapMan:12.4.1.1.4	Gene3D:3.40.50.10810	Gene3D:3.40.50.300
GO:A0A078G1K5	UniProt:A0A078G1K5	EnsemblPlants:CDY18857	ProteinID:CDY18857	ProteinID:CDY18857.1	ncoils:Coil
InterPro:DBINO	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682
GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0006338	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016589	GO:GO:0016787	GO:GO:0016818
GO:GO:0016887	GO:GO:0031491	GO:GO:0043044	EnsemblPlantsGene:GSBRNA2T00006038001	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:Homeobox-like_sf	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR017884	InterPro:IPR020838	InterPro:IPR036306
InterPro:IPR038718	InterPro:ISWI	InterPro:ISWI_HAND-dom	InterPro:ISWI_HAND-dom_sf	InterPro:P-loop_NTPase	PFAM:PF00176
PFAM:PF00271	PFAM:PF09110	PFAM:PF09111	PFAM:PF13892	PFscan:PS51192	PFscan:PS51194
PFscan:PS51293	PANTHER:PTHR10799	PANTHER:PTHR10799:SF887	InterPro:SANT/Myb	InterPro:SANT_dom	InterPro:SLIDE
SMART:SM00487	SMART:SM00490	SMART:SM00717	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF101224
SUPFAM:SSF46689	SUPFAM:SSF52540	UniParc:UPI0004EECCEF	SEG:seg	:	:

Description

BnaAnng03220DBnaAnng03220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1K5]

Coordinates

chrLK032089:+:708225..713635

Molecular Weight (calculated)

121942.0 Da

IEP (calculated)

5.500

GRAVY (calculated)

-0.816

Length

1049 amino acids

Sequence
(BLAST)

0001: MAKFSNRDDA LSSEEEEEEN VNTNIGEEDE EEIEAVTRSS DSDEEAAPVS DEEVAPIEDD YEDEEDDEKV EISKREKARL RDMQKLKKQK IQEMLDSQNA
0101: SIDADMNNKG KGRLKYLLQQ TELFSHFAKG DSSSSQKKAK GRGRHASKVT EEEEDEEYLK EEEDGLAASG NTRLLTQPSC IQGKLRDYQL AGLNWLIRLY
0201: ENGINGILAD EMGLGKTLQT ISLLAYLHEY RGINGPHMVV APKSTLGNWM NEIRRFCPVL RAVKFLGNPE ERRHIRDDLL VAGKFDICVT SFEMAIKEKT
0301: ALRRFSWRYI IIDEAHRIKN ENSLLSKTMR IFSTNYRLLI TGTPLQNNLH ELWALLNFLL PEIFSSAETF DEWFQISGEN DQQEVVQQLH KVLRPFLLRR
0401: LKSDVEKGLP PKKETILKVG MSQMQKQYYK ALLQKDLEAV NAGGERKRLL NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LITNAGKMVL LDKLLPKLKE
0501: RDSRVLIFSQ MTRLLDILED YLMYRGYLYC RIDGNTGGDE RDASIEAYNK PGSEKFVFLL STRAGGLGIN LATADVVILY DSDWNPQVDL QAQDRAHRIG
0601: QKKEVQVFRF CTESAIEEKV IERAYKKLAL DALVIQQGRL AEQKTVNKDE LLQMVRYGAE MVFSSKDSTI TDEDIDRIIA KGEEATAELD AKMKKFTEDA
0701: IQFKMDDSAD FYDFDDDEKD ENKLDFKKIV SDNWNDPPKR ERKRNYSESE YFKQTLRQGA PAKPKEPRIP RMPQLHDFQF FNTQRLTELY EKEVRYLMQT
0801: HQKNQLKDTV DVEEPEGGDP LTAEEVEEKE SLLEEGFSTW SRRDFNSFLR ACEKYGRNDI KSIASEMEGK TEEEVERYAQ VFKERYKELN DYDRILKNIE
0901: RGEARISRKD EIMKAIGKKL DRYRNPWLEL KIQYGQNKGK LYNEECDRFM ICMVNKLGYG NWDELKAAFR TSPLFRFDWF VKSRTSQELA RRCDTLIRLI
1001: EKENQEFDER ERQARKEKKL AKSATPSKRP LGRQQSESPS SLKKRKHLR

Best Arabidopsis Sequence Match ( AT3G06400.1 )
(BLAST)

0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR

Arabidopsis Description

CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.