Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71637 | Canola | nucleus | 66.85 | 97.57 |
| CDX83383 | Canola | nucleus, plastid | 94.44 | 47.78 |
| Bra000409.1-P | Field mustard | plastid | 93.98 | 46.95 |
| CDY37083 | Canola | plastid | 82.59 | 42.29 |
| CDY27338 | Canola | nucleus, plastid | 82.04 | 42.11 |
| AT2G46020.3 | Thale cress | plastid | 84.35 | 41.54 |
| VIT_15s0046g02290.t01 | Wine grape | plastid | 64.07 | 30.58 |
| KRH06623 | Soybean | nucleus | 61.76 | 30.28 |
| KRH48113 | Soybean | nucleus | 61.11 | 29.65 |
| KRH40427 | Soybean | nucleus | 60.83 | 29.57 |
| KRH00799 | Soybean | nucleus | 60.65 | 29.48 |
| Solyc01g094800.2.1 | Tomato | nucleus | 57.87 | 27.95 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 52.41 | 25.39 |
| OQU84199 | Sorghum | nucleus | 48.7 | 24.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.26 | 24.79 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 50.83 | 24.79 |
| TraesCS6B01G048200.2 | Wheat | nucleus, plastid | 50.46 | 24.66 |
| TraesCS6D01G039800.1 | Wheat | nucleus, plastid | 50.46 | 24.63 |
| HORVU6Hr1G006050.1 | Barley | plastid | 50.19 | 24.48 |
| GSMUA_Achr1P24350_001 | Banana | nucleus | 48.06 | 24.34 |
| Zm00001d014977_P002 | Maize | nucleus | 48.61 | 24.27 |
| CDY30994 | Canola | nucleus | 7.31 | 12.34 |
| CDY18840 | Canola | nucleus | 11.3 | 11.27 |
| CDY47176 | Canola | cytosol | 4.63 | 10.55 |
| CDY30755 | Canola | cytosol | 6.11 | 8.53 |
| CDX81370 | Canola | cytosol | 6.02 | 8.49 |
| CDY57125 | Canola | cytosol | 6.02 | 8.49 |
| CDY53848 | Canola | cytosol | 6.02 | 8.43 |
| CDX92595 | Canola | nucleus | 6.94 | 8.39 |
| CDX72050 | Canola | cytosol | 10.74 | 7.88 |
| CDY04120 | Canola | cytosol | 5.19 | 7.37 |
| CDY18857 | Canola | nucleus | 7.04 | 7.25 |
| CDY24695 | Canola | nucleus | 7.04 | 7.22 |
| CDY48619 | Canola | nucleus, plastid | 5.09 | 7.19 |
| CDX88940 | Canola | nucleus | 10.74 | 7.01 |
| CDY13907 | Canola | nucleus | 6.85 | 6.99 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 7.31 | 6.97 |
| CDY02609 | Canola | nucleus | 6.3 | 6.45 |
| CDY06115 | Canola | nucleus | 10.74 | 6.16 |
| CDY14410 | Canola | nucleus | 12.78 | 5.51 |
| CDY07678 | Canola | nucleus | 13.06 | 5.13 |
| CDY37209 | Canola | nucleus | 7.78 | 4.98 |
| CDX81444 | Canola | nucleus | 7.78 | 4.96 |
| CDX75208 | Canola | cytosol | 5.19 | 4.68 |
| CDX68802 | Canola | cytosol | 5.19 | 4.61 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 5.56 | 4.36 |
| CDY56279 | Canola | cytosol | 5.37 | 4.32 |
| CDY08401 | Canola | nucleus | 7.96 | 4.29 |
| CDY52874 | Canola | nucleus | 7.96 | 4.26 |
| CDY18960 | Canola | cytosol | 3.15 | 3.91 |
| CDX74702 | Canola | cytosol | 3.15 | 3.91 |
| CDX95673 | Canola | cytosol | 1.67 | 1.83 |
| CDY67658 | Canola | cytosol, nucleus | 0.28 | 0.27 |
| CDY68094 | Canola | nucleus | 0.28 | 0.24 |
Protein Annotations
| Gene3D:3.40.50.10810 | MapMan:35.1 | GO:A0A078E3G5 | InterPro:BRM | EnsemblPlants:CDX95672 | ProteinID:CDX95672 |
| ProteinID:CDX95672.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008094 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0040029 | GO:GO:0043044 | EnsemblPlantsGene:GSBRNA2T00101558001 | InterPro:Gln-Leu-Gln_QLQ |
| InterPro:Helicase_ATP-bd | InterPro:IPR014001 | InterPro:IPR014978 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF08880 | PFscan:PS51192 | PFscan:PS51666 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF577 | SMART:SM00951 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0004EDD740 | SEG:seg | : |
Description
BnaC03g25530D
Coordinates
chrLK031890:+:579593..584074
Molecular Weight (calculated)
119665.0 Da
IEP (calculated)
10.263
GRAVY (calculated)
-0.790
Length
1080 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQSGGSGGGP ARNPGMGPGG RTNSTSSAAS PSSSSSSVQQ QQQQQLASRQ VKDSETQLIQ HQLRNSEGND GMFAYHAGGM MGGGSFGSPS GSMRQPQQPR
0101: KFFDSPQLQQ QHGEGQQSIN PMQQAYIQFA LQAQQQKAHQ QARMGIMMGS SKDQDARMGV LNMQEMMPMQ TSNQAQASSS RPSGEQLAHG ERQMGSGPQQ
0201: RNETKPHPQQ AGTGQLMPGN IIRPMQAPQA MQGVNNMGTN QLALSQQWQA MQAWARERNI DLSHPANANQ MSHILQARMA AQQKAIEGNV ASQSPAMPVS
0301: SQPVSSSAVP GENSPRANSA SDFSGQSGGP AKARHANSFA STSSPRMVNP GASPFSQGRD NPMYPRHLAQ PTNGMQSGNS LQTSANEAHV LDQKKRLGSS
0401: ENLQMQQPRQ LNAPTPNLAA PSDAGPLSNS SRQSGQGTQQ AQQRSGFTKQ QLHVLKAQIL AFRRLKKGEG SLPQELLKAI APPPLELQTQ RQVSPVRLQV
0501: QDRSTDKTVE DQARLLESGK ESQAAASSNG QIFSKEEENL RDTEVPLAKS HSQLFQNRGK EPASIDAVTK LEQQTDVFPV KSDQGAEAST QQTPRSDSNA
0601: DKGKAVASDG DQSNVPSQAN TPQQPKDTAS ARKYHGPLFD FPFFTRKHDS YGSATANANN NLTLAYDIKD LICEEGAEFF NKKRADSLKK INGLLAKNLE
0701: RKRIRPDLVL RLQIEEKKLR LRDLQSRVRD EVDRQQQEIM SMPDRPYRKF VRLCERQRLE MNRQVLASQK AVREKQLKTI FQWRKKLLEA HWAIRDARTA
0801: RNRGVAKYHE KMLREFSKRK DDGRNKRMEA LKNNDVERYR EMLLEQQTNI PGDAAERYAV LSSFLTQTED YLHKLGGKIT ATKNQQEVEE AANAAAVAAR
0901: LQGLSEEEVR AAAACAREEV VIRNRFMEMN APKDNSSVNK YYTLAHAVNE VVVRQPSMLQ AGTLRDYQLV GLQWMLSLYN NKLNGILADE MGLGKTVQVM
1001: ALIAYLMEFK GNYGPHLIIV PNAVLVNWKV CVFYNASPII FHRNHASAYN QCFFRDETPI TQLTSPIPHK SLYPFFLNNR
0101: KFFDSPQLQQ QHGEGQQSIN PMQQAYIQFA LQAQQQKAHQ QARMGIMMGS SKDQDARMGV LNMQEMMPMQ TSNQAQASSS RPSGEQLAHG ERQMGSGPQQ
0201: RNETKPHPQQ AGTGQLMPGN IIRPMQAPQA MQGVNNMGTN QLALSQQWQA MQAWARERNI DLSHPANANQ MSHILQARMA AQQKAIEGNV ASQSPAMPVS
0301: SQPVSSSAVP GENSPRANSA SDFSGQSGGP AKARHANSFA STSSPRMVNP GASPFSQGRD NPMYPRHLAQ PTNGMQSGNS LQTSANEAHV LDQKKRLGSS
0401: ENLQMQQPRQ LNAPTPNLAA PSDAGPLSNS SRQSGQGTQQ AQQRSGFTKQ QLHVLKAQIL AFRRLKKGEG SLPQELLKAI APPPLELQTQ RQVSPVRLQV
0501: QDRSTDKTVE DQARLLESGK ESQAAASSNG QIFSKEEENL RDTEVPLAKS HSQLFQNRGK EPASIDAVTK LEQQTDVFPV KSDQGAEAST QQTPRSDSNA
0601: DKGKAVASDG DQSNVPSQAN TPQQPKDTAS ARKYHGPLFD FPFFTRKHDS YGSATANANN NLTLAYDIKD LICEEGAEFF NKKRADSLKK INGLLAKNLE
0701: RKRIRPDLVL RLQIEEKKLR LRDLQSRVRD EVDRQQQEIM SMPDRPYRKF VRLCERQRLE MNRQVLASQK AVREKQLKTI FQWRKKLLEA HWAIRDARTA
0801: RNRGVAKYHE KMLREFSKRK DDGRNKRMEA LKNNDVERYR EMLLEQQTNI PGDAAERYAV LSSFLTQTED YLHKLGGKIT ATKNQQEVEE AANAAAVAAR
0901: LQGLSEEEVR AAAACAREEV VIRNRFMEMN APKDNSSVNK YYTLAHAVNE VVVRQPSMLQ AGTLRDYQLV GLQWMLSLYN NKLNGILADE MGLGKTVQVM
1001: ALIAYLMEFK GNYGPHLIIV PNAVLVNWKV CVFYNASPII FHRNHASAYN QCFFRDETPI TQLTSPIPHK SLYPFFLNNR
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.