Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81370 | Canola | cytosol | 96.48 | 96.48 |
| CDY53848 | Canola | cytosol | 88.77 | 88.2 |
| CDY30755 | Canola | cytosol | 88.9 | 87.98 |
| AT5G66750.1 | Thale cress | cytosol | 87.08 | 87.3 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 72.32 | 72.99 |
| PGSC0003DMT400040011 | Potato | cytosol | 71.41 | 72.55 |
| PGSC0003DMT400038561 | Potato | cytosol | 69.58 | 70.13 |
| Solyc02g062780.2.1 | Tomato | cytosol | 70.37 | 69.91 |
| KRH76800 | Soybean | cytosol | 69.19 | 69.55 |
| KRH28662 | Soybean | cytosol | 68.41 | 68.68 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 66.45 | 67.06 |
| Solyc02g085390.2.1 | Tomato | cytosol | 70.23 | 66.34 |
| Bra037150.1-P | Field mustard | nucleus | 98.83 | 63.14 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 61.75 | 62.98 |
| TraesCS7D01G069700.1 | Wheat | cytosol | 63.05 | 62.0 |
| EER97913 | Sorghum | cytosol | 62.79 | 61.83 |
| Zm00001d007978_P003 | Maize | cytosol | 63.05 | 61.29 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 60.57 | 59.56 |
| TraesCS4D01G053600.2 | Wheat | cytosol | 63.97 | 58.68 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 63.58 | 58.11 |
| EER93549 | Sorghum | cytosol | 63.32 | 58.01 |
| Os09t0442700-01 | Rice | cytosol | 63.84 | 57.87 |
| Os03t0722400-01 | Rice | cytosol | 63.84 | 57.6 |
| TraesCS2D01G365000.1 | Wheat | cytosol | 61.36 | 57.25 |
| TraesCS2B01G385300.1 | Wheat | cytosol | 61.1 | 57.14 |
| Zm00001d033827_P006 | Maize | cytosol | 62.53 | 56.49 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 63.71 | 55.96 |
| TraesCS4B01G053600.1 | Wheat | cytosol, plastid | 63.58 | 53.75 |
| CDY47176 | Canola | cytosol | 27.94 | 45.15 |
| CDX92595 | Canola | nucleus | 33.55 | 28.75 |
| CDY48619 | Canola | nucleus, plastid | 25.98 | 26.01 |
| CDY04120 | Canola | cytosol | 25.72 | 25.92 |
| CDY18857 | Canola | nucleus | 35.12 | 25.64 |
| CDY24695 | Canola | nucleus | 34.33 | 24.98 |
| CDY13907 | Canola | nucleus | 33.68 | 24.36 |
| CDY02609 | Canola | nucleus | 33.29 | 24.17 |
| CDY18840 | Canola | nucleus | 33.55 | 23.73 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 34.73 | 23.48 |
| CDY18960 | Canola | cytosol | 26.5 | 23.36 |
| CDX74702 | Canola | cytosol | 26.24 | 23.1 |
| CDX75208 | Canola | cytosol | 27.81 | 17.81 |
| CDX68802 | Canola | cytosol | 28.07 | 17.71 |
| CDY56279 | Canola | cytosol | 29.37 | 16.75 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 29.11 | 16.21 |
| CDY30994 | Canola | nucleus | 13.32 | 15.94 |
| CDY67658 | Canola | cytosol, nucleus | 21.28 | 14.44 |
| CDX81444 | Canola | nucleus | 31.33 | 14.18 |
| CDY37209 | Canola | nucleus | 31.2 | 14.18 |
| CDX72050 | Canola | cytosol | 27.15 | 14.12 |
| CDX88940 | Canola | nucleus | 29.5 | 13.66 |
| CDY68094 | Canola | nucleus | 21.28 | 13.07 |
| CDY08401 | Canola | nucleus | 30.81 | 11.77 |
| CDY52874 | Canola | nucleus | 30.81 | 11.7 |
| CDY06115 | Canola | nucleus | 27.02 | 10.99 |
| CDY27338 | Canola | nucleus, plastid | 29.24 | 10.65 |
| CDY37083 | Canola | plastid | 29.24 | 10.62 |
| CDX95673 | Canola | cytosol | 13.58 | 10.57 |
| CDX83383 | Canola | nucleus, plastid | 28.46 | 10.21 |
| CDY14410 | Canola | nucleus | 32.9 | 10.07 |
| CDY07678 | Canola | nucleus | 32.77 | 9.13 |
| CDX95672 | Canola | plastid | 8.49 | 6.02 |
| CDY71637 | Canola | nucleus | 2.74 | 2.84 |
Protein Annotations
| MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078J3N6 | UniProt:A0A078J3N6 | EnsemblPlants:CDY57125 |
| ProteinID:CDY57125 | ProteinID:CDY57125.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00020570001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | UniParc:UPI0004EDE3E4 | SEG:seg | : | : | : |
Description
BnaA09g52610DBnaA09g52610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3N6]
Coordinates
chrLK033548:-:28521..32502
Molecular Weight (calculated)
86781.0 Da
IEP (calculated)
6.651
GRAVY (calculated)
-0.553
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLRSTKKT PAPVTASDEK TKKDASADSS TSVLSDEENS EETLVGKEIL LAKDGDSSLI SEAMSQEEEQ LLKLREDEEK AKCAESGEAT DLNDTQFTKL
101: DELLTQTQLY SEFLLEKMED ITKNGIEGET QKTEPEKKRG RGRKRKAATQ AASMKAKKAV AAMISRSKEG HESANSDLTE EERGMKEQSE LVPLLTGGKL
201: KSYQLKGVKW LISLWQNGLN GILADQMGLG KTIQTIGFLS HLKGNGLDGP YLVIAPLSTL SNWMNEIARF TPTINAIIYH GDKKKRDELR RKHMPKTVGP
301: KFPIVITSYE VAMNDARKNL RHYPWKYVVI DEGHRLKNHQ CKLLRELKHM KMENKLLLTG TPLQNNLSEL WSLLNFILPD IFASHDEFES WFDFSEKNKS
401: EASKEEGEEK RRAQVVAKLH NILRPFILRR MKCDVELLLP RKKEIIIYAT MTDHQKNFQD HLVNRTLEAH LGENAIPGQG WKGKLNNLVI QLRKNCNHPD
501: LLAGQIDGSY FYPPIEDIVG QCGKFRLLER LLVRLFANNH KVLVFTQWTK ILDIMDYYFS EKGFEVCRID GNVKLDERRR QIDEFNDEKS SCRIFLLSTR
601: AGGLGINLTA ADTCILYDSD WNPQMDLQAM DRCHRIGQTK PVHVYRLATA QSVEGRVLKR AYSKLKLEHV VIGKGQFHQE RAKSSIPLEE EDILALLKDD
701: ETAEDKLIQT DISEEDLDRL LDRSDLMITS PGETEPEAGE AFPVKGPGWE VVLPSSAGGM LSSLNS
101: DELLTQTQLY SEFLLEKMED ITKNGIEGET QKTEPEKKRG RGRKRKAATQ AASMKAKKAV AAMISRSKEG HESANSDLTE EERGMKEQSE LVPLLTGGKL
201: KSYQLKGVKW LISLWQNGLN GILADQMGLG KTIQTIGFLS HLKGNGLDGP YLVIAPLSTL SNWMNEIARF TPTINAIIYH GDKKKRDELR RKHMPKTVGP
301: KFPIVITSYE VAMNDARKNL RHYPWKYVVI DEGHRLKNHQ CKLLRELKHM KMENKLLLTG TPLQNNLSEL WSLLNFILPD IFASHDEFES WFDFSEKNKS
401: EASKEEGEEK RRAQVVAKLH NILRPFILRR MKCDVELLLP RKKEIIIYAT MTDHQKNFQD HLVNRTLEAH LGENAIPGQG WKGKLNNLVI QLRKNCNHPD
501: LLAGQIDGSY FYPPIEDIVG QCGKFRLLER LLVRLFANNH KVLVFTQWTK ILDIMDYYFS EKGFEVCRID GNVKLDERRR QIDEFNDEKS SCRIFLLSTR
601: AGGLGINLTA ADTCILYDSD WNPQMDLQAM DRCHRIGQTK PVHVYRLATA QSVEGRVLKR AYSKLKLEHV VIGKGQFHQE RAKSSIPLEE EDILALLKDD
701: ETAEDKLIQT DISEEDLDRL LDRSDLMITS PGETEPEAGE AFPVKGPGWE VVLPSSAGGM LSSLNS
001: MVSLRSRKVI PASEMVSDGK TEKDASGDSP TSVLNEEENC EEKSVTVVEE EILLAKNGDS SLISEAMAQE EEQLLKLRED EEKANNAGSA VAPNLNETQF
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS
Arabidopsis Description
DDM1ATP-dependent DNA helicase DDM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.