Factsheet for Os09t0442700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0722400-01	Rice	cytosol	93.25	92.82
EER97913	Sorghum	cytosol	75.15	81.62
TraesCS7A01G074600.1	Wheat	cytosol	70.53	79.36
EER93549	Sorghum	cytosol	78.34	79.19
TraesCS2A01G368200.1	Wheat	cytosol	72.19	78.31
TraesCS7D01G069700.1	Wheat	cytosol	72.07	78.18
Zm00001d033827_P006	Maize	cytosol	78.22	77.95
Zm00001d007978_P003	Maize	cytosol	72.66	77.92
TraesCS2D01G365000.1	Wheat	cytosol	74.08	76.25
TraesCS2B01G385300.1	Wheat	cytosol	73.49	75.82
TraesCS4D01G053600.2	Wheat	cytosol	74.08	74.97
TraesCS4A01G261000.1	Wheat	cytosol	73.85	74.46
GSMUA_Achr3P26090_001	Banana	cytosol	62.96	70.09
TraesCS4A01G372200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	72.19	69.95
TraesCS4B01G053600.1	Wheat	cytosol, plastid	73.96	68.98
VIT_04s0023g01610.t01	Wine grape	cytosol	61.42	68.38
PGSC0003DMT400040011	Potato	cytosol	60.95	68.3
PGSC0003DMT400038561	Potato	cytosol	60.47	67.24
Solyc02g062780.2.1	Tomato	cytosol	60.0	65.76
KRH76800	Soybean	cytosol	58.22	64.57
AT5G66750.1	Thale cress	cytosol	58.22	64.4
KRH28662	Soybean	cytosol	57.99	64.22
CDX81370	Canola	cytosol	57.99	63.97
CDY57125	Canola	cytosol	57.87	63.84
Bra012099.1-P	Field mustard	cytosol	58.11	63.68
CDY53848	Canola	cytosol	58.11	63.68
CDY30755	Canola	cytosol	58.11	63.44
Solyc02g085390.2.1	Tomato	cytosol	60.12	62.64
Bra037150.1-P	Field mustard	nucleus	57.87	40.78
Os04t0566100-00	Rice	cytosol	24.62	24.1
Os01t0367900-01	Rice	nucleus	31.48	24.03
Os05t0150300-01	Rice	nucleus	32.07	23.4
Os05t0144300-01	Rice	nucleus	30.77	23.05
Os01t0881000-00	Rice	nucleus	24.26	18.62
Os07t0660200-01	Rice	nucleus	11.6	15.53
Os03t0352500-01	Rice	nucleus	2.84	11.21
Os07t0497100-01	Rice	nucleus	26.98	10.09
Os02t0689800-01	Rice	nucleus	11.36	9.01
Os03t0352450-00	Rice	nucleus	2.72	5.01
Os02t0114033-00	Rice	nucleus	3.43	3.35
Os06t0255200-02	Rice	cytosol, nucleus, plastid	1.42	1.84
Os06t0183800-01	Rice	cytosol, nucleus	0.59	1.13
Os02t0114000-01	Rice	cytosol, nucleus	0.71	1.03

Protein Annotations

MapMan:12.5.2.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EntrezGene:4347183	EMBL:AB177378	ProteinID:BAF34944.1
ProteinID:BAT08311.1	ncoils:Coil	ProteinID:EEE69802.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006338
GO:GO:0006351	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0031011	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	EnsemblPlantsGene:Os09g0442700	EnsemblPlants:Os09t0442700-01	InterPro:P-loop_NTPase
PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF812
UniProt:Q05KP6	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540
UniParc:UPI0000E5B022	RefSeq:XP_015611621.1	SEG:seg	:	:	:

Description

Decrease in DNA Methylation 1aChromatin remodeling factor, Genome-wide DNA methylation (Os09t0442700-01)

Coordinates

chr9:-:16461644..16467575

Molecular Weight (calculated)

95212.1 Da

IEP (calculated)

5.289

GRAVY (calculated)

-0.452

Length

845 amino acids

Sequence
(BLAST)

001: MSEVRSVPGM KVEASPAAAA AATVDSPTSV LEDDEISECK NGDVLDTTEA IKQEEDHLDV LIEEKVDGFV DASSSLNVEP AANNSDLSPL TVPVKEEGQL
101: LEPVKEEKAD DFVDAVPSLP IDLEAKNGDA SLITDAMKEE EEKLHDARVK AEEEEVARKR EEAARLAFDP NARFNKLDEL LSQTQLYSEF LLEKMETIAD
201: VEGVQTHAEE EPVEEKKNGR GRKRKATSAP KYNDKKAKKA VAVMLTRSHE DCSPEDCTLT EEERWEKEQA RLVPLMTGGK LKSYQIKGVK WLISLWQNGL
301: NGILADQMGL GKTIQTIGFL AHLKGKGLDG PYLIIAPLST LSNWVNEISR FVPSMTGLIY HGDKAARAEI RRKFMPKTTG PDFPLIVTSY EMAMSDAKHL
401: AHYKWKYVIV DEGHRLKNSK CLLLRELKRL PMDNKLLLTG TPLQNNLAEL WSLLNFILPD IFSSHQEFES WFDFSAKGGE EEQEDSEEKR KVDVVSKLHA
501: ILRPFLLRRM KEDVEHMLPR KKEIIIYANM TDHQKQIQNH LVEQTFDQYL HEKSEIVLRK PGIKAKLNNL LIQLRKNCNH PDLLESAYDS SGLYPPVEKL
601: LEQCGKFQLL NRLLSLLLAR KHKVLIFSQW TKVLDIIEYY LETKGLQVCR IDGSVKLEER RRQIAEFNDL NSSMNIFILS TRAGGLGINL TSADTCILYD
701: SDWNPQMDLQ AMDRCHRIGQ TRPVHVYRLA TSHSVEGRII KKAFGKLRLE HVVIGKGQFE QDRAKPNALD EAELLALLRD EQGDEDRMIQ TDISDEDLLK
801: VMDRSDLTGP PANADAAPLV PLKGPGWEVV VPTKSGGGML TSLTS

Best Arabidopsis Sequence Match ( AT5G66750.1 )
(BLAST)

001: MVSLRSRKVI PASEMVSDGK TEKDASGDSP TSVLNEEENC EEKSVTVVEE EILLAKNGDS SLISEAMAQE EEQLLKLRED EEKANNAGSA VAPNLNETQF
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS

Arabidopsis Description

DDM1ATP-dependent DNA helicase DDM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.