Factsheet for Os03t0352450-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0114033-00	Rice	nucleus	10.02	5.32
Os05t0144300-01	Rice	nucleus	7.84	3.19
Os04t0566100-00	Rice	cytosol	5.88	3.13
Os09t0442700-01	Rice	cytosol	5.01	2.72
Os03t0722400-01	Rice	cytosol	4.79	2.59
Os06t0255200-02	Rice	cytosol, nucleus, plastid	3.49	2.45
Os01t0367900-01	Rice	nucleus	5.88	2.44
Os05t0150300-01	Rice	nucleus	5.45	2.16
Os01t0881000-00	Rice	nucleus	4.79	2.0
PGSC0003DMT400066819	Potato	cytosol	1.31	1.62
KRH75253	Soybean	cytosol, nucleus, plastid	2.83	1.48
Solyc01g090650.1.1	Tomato	cytosol, nucleus, plastid	1.96	1.47
VIT_15s0021g02180.t01	Wine grape	cytosol	2.4	1.29
Os07t0497100-01	Rice	nucleus	6.32	1.28
TraesCS4B01G372600.1	Wheat	cytosol	2.4	1.25
HORVU4Hr1G088540.8	Barley	cytosol	2.4	1.25
TraesCS4D01G364600.1	Wheat	cytosol, mitochondrion	2.4	1.25
TraesCS5A01G541400.1	Wheat	cytosol	2.4	1.25
AT2G44980.2	Thale cress	cytosol	2.18	1.14
Zm00001d048552_P005	Maize	cytosol	2.18	1.11
OQU93492	Sorghum	cytosol	2.18	1.1
Bra004881.1-P	Field mustard	nucleus	1.53	1.08
CDY18960	Canola	cytosol	1.96	1.04
CDX74702	Canola	cytosol	1.96	1.03
Os03t0352500-01	Rice	nucleus	0.44	0.93
GSMUA_AchrUn_...	Banana	cytosol, nucleus	0.44	0.6
Os07t0660200-01	Rice	nucleus	0.65	0.48
Os02t0689800-01	Rice	nucleus	0.87	0.38
Os06t0183800-01	Rice	cytosol, nucleus	0.0	0.0
Os02t0114000-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A0P0VXH3	ProteinID:BAS84208.1	InterPro:DBINO	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281
GO:GO:0006338	GO:GO:0006351	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0031011	InterPro:IPR020838
EnsemblPlantsGene:Os03g0352450	EnsemblPlants:Os03t0352450-00	PFAM:PF13892	PFscan:PS51413	UniParc:UPI0003939B7C	SEG:seg

Description

Hypothetical conserved gene. (Os03t0352450-00)

Coordinates

chr3:+:13236508..13239580

Molecular Weight (calculated)

52236.2 Da

IEP (calculated)

10.040

GRAVY (calculated)

-0.614

Length

459 amino acids

Sequence
(BLAST)

001: MDPRRPPSRG GAAANGGGLS YSTLFNLEPL LNFKVPLPED LDRYRRSSPN GSMSSQGQGS LSDQYNGIND ASHGLHRKRK RNLDGASDDD EVDAYSNQIT
101: EEHYRTMLSE HVQKYRRSKF KEDVFSSDPP QVIVPQKHKN GSARVTKYRS DTRNVAMLGG VEATAEYNGT KSTNAYGGFN KVVASLDSSY LDMGDNVSYK
201: IPEGYDKLAL SLNLPVFSDI RVEETFLNGT LDLRTLAAML STDQKFETTN RGGLAEPQPQ YESLQERVKV QKFSLQVTED PFAIPEGAAG RIRRFIISES
301: GSLHVHYVKV LEKGDTYEII ERSLPKKQII RKDPSEIARE ESEKTIKLWH AIAVKGIPRH HRNFMALLKK RQVDAKRFSE NCQREVKFKV SRSLKLMRSA
401: AIRTRRLARD MLIFWKRVDK EQVFFNLLSL LFFSSTETKF GIIAFYFFSK QQYMGLNTI

Best Arabidopsis Sequence Match ( AT3G57300.2 )
(BLAST)

0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRVMFFST WIISFDPWAV
0701: RQICICKRAC NVVRFQTLSD MDAGFHILIT SYQLLVTDEK YFRRVKWQYM VLDEAQAIKS SSSIRWKTLL SFNCRNRLLL TGTPIQNNMA ELWALLHFIM
0801: PMLFDNHDQF NEWFSKGIEN HAEHGGTLNE HQLNRLHAIL KPFMLRRVKK DVVSELTTKT EVTVHCKLSS RQQAFYQAIK NKISLAELFD SNRGQFTDKK
0901: VLNLMNIVIQ LRKVCNHPEL FERNEGSSYL YFGVTSNSLL PHPFGELEDV HYSGGQNPII YKIPKLLHQE VLQNSETFCS SVGRGISRES FLKHFNIYSP
1001: EYILKSIFPS DSGVDQVVSG SGAFGFSRLM DLSPSEVGYL ALCSVAERLL FSILRWERQF LDELVNSLME SKDGDLSDNN IERVKTKAVT RMLLMPSKVE
1101: TNFQKRRLST GPTRPSFEAL VISHQDRFLS SIKLLHSAYT YIPKARAPPV SIHCSDRNSA YRVTEELHQP WLKRLLIGFA RTSEANGPRK PNSFPHPLIQ
1201: EIDSELPVVQ PALQLTHRIF GSCPPMQSFD PAKLLTDSGK LQTLDILLKR LRAGNHRVLL FAQMTKMLNI LEDYMNYRKY KYLRLDGSST IMDRRDMVRD
1301: FQHRSDIFVF LLSTRAGGLG INLTAADTVI FYESDWNPTL DLQAMDRAHR LGQTKDVTVY RLICKETVEE KILHRASQKN TVQQLVMTGG HVQGDDFLGA
1401: ADVVSLLMDD AEAAQLEQKF RELPLQVKDR QKKKTKRIRI DAEGDATLEE LEDVDRQDNG QEPLEEPEKP KSSNKKRRAA SNPKARAPQK AKEEANGEDT
1501: PQRTKRVKRQ TKSINESLEP VFSASVTESN KGFDPSSSAN

Arabidopsis Description

INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.