Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0269900-01 | |
| Os03t0162200-01 | |
| Os03t0367800-01 | |
| Os03t0743400-01 | |
| Os10t0418000-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85588 | Sorghum | nucleus | 79.55 | 41.84 |
| Zm00001d017660_P021 | Maize | nucleus | 77.02 | 39.82 |
| Zm00001d051507_P007 | Maize | nucleus | 76.55 | 39.59 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 80.02 | 39.56 |
| TraesCS7D01G531100.1 | Wheat | nucleus | 80.49 | 39.52 |
| TraesCS7B01G468100.1 | Wheat | nucleus | 80.3 | 39.43 |
| GSMUA_Achr3P26510_001 | Banana | nucleus | 48.69 | 31.9 |
| VIT_08s0007g06370.t01 | Wine grape | nucleus | 55.53 | 28.85 |
| KRH71872 | Soybean | nucleus | 53.47 | 27.93 |
| KRH38118 | Soybean | nucleus | 53.19 | 27.67 |
| CDY08401 | Canola | nucleus | 49.06 | 26.08 |
| AT3G12810.1 | Thale cress | nucleus | 50.28 | 26.08 |
| CDY52874 | Canola | nucleus | 49.34 | 26.08 |
| Bra034727.1-P | Field mustard | nucleus | 48.97 | 25.85 |
| Os03t0352500-01 | Rice | nucleus | 5.07 | 25.23 |
| Solyc03g063220.1.1 | Tomato | nucleus | 36.12 | 23.94 |
| Os07t0660200-01 | Rice | nucleus | 12.66 | 21.39 |
| Os09t0442700-01 | Rice | cytosol | 9.01 | 11.36 |
| Os05t0150300-01 | Rice | nucleus | 12.2 | 11.23 |
| Os03t0722400-01 | Rice | cytosol | 8.91 | 11.19 |
| Os01t0367900-01 | Rice | nucleus | 11.44 | 11.02 |
| Os04t0566100-00 | Rice | cytosol | 8.26 | 10.2 |
| Os05t0144300-01 | Rice | nucleus | 10.13 | 9.57 |
| Os01t0881000-00 | Rice | nucleus | 8.07 | 7.81 |
| Os06t0183800-01 | Rice | cytosol, nucleus | 2.91 | 7.03 |
| Os07t0497100-01 | Rice | nucleus | 14.54 | 6.86 |
| Os02t0114000-01 | Rice | cytosol, nucleus | 3.1 | 5.66 |
| Os03t0352450-00 | Rice | nucleus | 0.38 | 0.87 |
| Os06t0255200-02 | Rice | cytosol, nucleus, plastid | 0.0 | 0.0 |
| Os02t0114033-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.4.4.1 | Gene3D:3.40.50.300 | UniProt:A0A0P0VNC6 | ProteinID:BAS80372.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042742 | GO:GO:0046686 | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR017877 | InterPro:Myb-like_dom | EnsemblPlantsGene:Os02g0689800 | EnsemblPlants:Os02t0689800-01 | InterPro:P-loop_NTPase | PFAM:PF00271 |
| PFscan:PS50090 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF832 | SMART:SM00490 | SUPFAM:SSF52540 |
| UniParc:UPI0000DF0811 | SEG:seg | : | : | : | : |
Description
Similar to DEAD/DEAH box helicase domain-containing protein PIE1. (Os02t0689800-01)
Coordinates
chr2:-:28294322..28299880
Molecular Weight (calculated)
121172.0 Da
IEP (calculated)
5.182
GRAVY (calculated)
-0.644
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: KKNPLCHMEF SSSLANLVLS SVDRFKTMLD FIESFTFAIP AARAPAPLFW CNKGKSPVLI EPAYREKCMN EFSPVFSPIR PAIVRRQVYF PDRRLIQFDC
0101: GKLQELAILL RRLKSEGHRA LIFTQMTKML DILEEFINLY GYTYLRLDGS TQPEERQTLM QRFNTNPKFF LFILSTRSGG VGINLVGADT VIFYDSDWNP
0201: AMDQQAQDRC HRIGQTREVH IYRLISESTI EENILKKANQ KRALDDLVIQ RGSYNTEFFK KLDPMEFFSG HSSLHAENQQ KDCSLSAGPS NGTNLALSNV
0301: DVEAAIRQAE DEADYMALKR LEQEEAVDNQ EFSEEAAGRL EEDDLVNEDD TKPDEHTNEE HKYQCSDLVK DKHVALSINQ LDEEKAITLA GGDGDIDMLA
0401: DVKQMAAAAA AAGQASSSFE NQLRPIDRYA MRFLELWDPI IDKAAINYQV NVEEEEWELE RIEKLKEDLE AEIDEDQEPL SYESWDVDFA TTAYRQHVEA
0501: LAQKQLFEEQ ERQAREAAKE LEEKNDNSTQ RKKSKKNKKK AAKFKSLKKG RLSSESEVMV EETSVDTMSI DDNAPSPELM SDESAHHHSN KHKRIMSTNE
0601: EENSNSRSLK KLKKAPKSSF SSEALSPKHF LEGKQLKLKD ELNDSDPKSG ARIKSDGRIS VPCMPVKRVM VIKPERLKKK SLWSRDCASD SWTTEEDAVL
0701: CATVNEYGPL WELASDSLHS VPGGAFYRGR YRHPVHCCER FRELVCKHIL SATDNSNSEK VPSGTGKAIL KVSEDQTQML LNVISELPNN ELLLQKHFMA
0801: VLSSVWRSKS ACESHCVMSY SNTLQKPGRL SENWSMTNFR PNFNLVRTAL ADAQVQCPRM VVPTSNHESR RNFLELELDF LTDRDDYEAD FPSVVNVSIL
0901: EPEPLKHAVE PVEHSLLSTL SYRHAENRFR MVSETCFEGE GSHWASSAFH TYDAGRHKSG PKSIGKHKAS SESGRPPKSK IQRTTEPQEV PVTNNFHRIP
1001: GQLLHNSAEF HITQSLSDLG ISDSEFTYFD NLPQEAETEF VPYQYDSDVL SGIEELDPLT DFTDIG
0101: GKLQELAILL RRLKSEGHRA LIFTQMTKML DILEEFINLY GYTYLRLDGS TQPEERQTLM QRFNTNPKFF LFILSTRSGG VGINLVGADT VIFYDSDWNP
0201: AMDQQAQDRC HRIGQTREVH IYRLISESTI EENILKKANQ KRALDDLVIQ RGSYNTEFFK KLDPMEFFSG HSSLHAENQQ KDCSLSAGPS NGTNLALSNV
0301: DVEAAIRQAE DEADYMALKR LEQEEAVDNQ EFSEEAAGRL EEDDLVNEDD TKPDEHTNEE HKYQCSDLVK DKHVALSINQ LDEEKAITLA GGDGDIDMLA
0401: DVKQMAAAAA AAGQASSSFE NQLRPIDRYA MRFLELWDPI IDKAAINYQV NVEEEEWELE RIEKLKEDLE AEIDEDQEPL SYESWDVDFA TTAYRQHVEA
0501: LAQKQLFEEQ ERQAREAAKE LEEKNDNSTQ RKKSKKNKKK AAKFKSLKKG RLSSESEVMV EETSVDTMSI DDNAPSPELM SDESAHHHSN KHKRIMSTNE
0601: EENSNSRSLK KLKKAPKSSF SSEALSPKHF LEGKQLKLKD ELNDSDPKSG ARIKSDGRIS VPCMPVKRVM VIKPERLKKK SLWSRDCASD SWTTEEDAVL
0701: CATVNEYGPL WELASDSLHS VPGGAFYRGR YRHPVHCCER FRELVCKHIL SATDNSNSEK VPSGTGKAIL KVSEDQTQML LNVISELPNN ELLLQKHFMA
0801: VLSSVWRSKS ACESHCVMSY SNTLQKPGRL SENWSMTNFR PNFNLVRTAL ADAQVQCPRM VVPTSNHESR RNFLELELDF LTDRDDYEAD FPSVVNVSIL
0901: EPEPLKHAVE PVEHSLLSTL SYRHAENRFR MVSETCFEGE GSHWASSAFH TYDAGRHKSG PKSIGKHKAS SESGRPPKSK IQRTTEPQEV PVTNNFHRIP
1001: GQLLHNSAEF HITQSLSDLG ISDSEFTYFD NLPQEAETEF VPYQYDSDVL SGIEELDPLT DFTDIG
0001: MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
Arabidopsis Description
PIE1Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.