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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034727.1-P Field mustard nucleus 99.7 99.01
CDY52874 Canola nucleus 97.81 97.22
AT3G12810.1 Thale cress nucleus 86.28 84.18
VIT_08s0007g06370.t01 Wine grape nucleus 65.19 63.69
Solyc03g063220.1.1 Tomato nucleus 50.87 63.43
KRH71872 Soybean nucleus 63.49 62.37
KRH38118 Soybean nucleus 63.29 61.93
OQU85588 Sorghum nucleus 54.71 54.12
Zm00001d017660_P021 Maize nucleus 54.26 52.76
Zm00001d051507_P007 Maize nucleus 53.67 52.21
GSMUA_Achr3P26510_001 Banana nucleus 41.55 51.2
TraesCS7A01G544700.1 Wheat nucleus 54.61 50.79
TraesCS7D01G531100.1 Wheat nucleus 54.81 50.62
TraesCS7B01G468100.1 Wheat nucleus 54.66 50.48
Os02t0689800-01 Rice nucleus 26.08 49.06
CDY47176 Canola cytosol 9.88 41.77
CDY53848 Canola cytosol 12.27 31.91
CDY30755 Canola cytosol 12.27 31.78
CDX81370 Canola cytosol 11.87 31.07
CDY57125 Canola cytosol 11.77 30.81
CDX92595 Canola nucleus 13.37 29.98
CDY04120 Canola cytosol 11.22 29.61
CDY48619 Canola nucleus, plastid 11.27 29.54
CDY24695 Canola nucleus 14.26 27.16
CDY18857 Canola nucleus 14.11 26.98
CDY13907 Canola nucleus 14.11 26.72
CDY02609 Canola nucleus 13.72 26.07
CDY18840 Canola nucleus 13.77 25.48
CDY05261 Canola endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 14.31 25.33
CDX74702 Canola cytosol 10.42 24.02
CDY18960 Canola cytosol 10.32 23.82
CDX75208 Canola cytosol 13.12 21.99
CDX68802 Canola cytosol 13.22 21.83
CDY30994 Canola nucleus 6.88 21.56
CDY56279 Canola cytosol 13.62 20.33
CDX72050 Canola cytosol 14.66 19.96
CDX76767 Canola cytosol, nucleus, plastid 13.67 19.91
CDX88940 Canola nucleus 15.56 18.86
CDY67658 Canola cytosol, nucleus 10.07 17.89
CDX81444 Canola nucleus 14.46 17.13
CDY37209 Canola nucleus 14.36 17.08
CDY68094 Canola nucleus 10.17 16.36
CDX95673 Canola cytosol 7.88 16.06
CDY06115 Canola nucleus 14.76 15.72
CDX83383 Canola nucleus, plastid 14.61 13.72
CDY37083 Canola plastid 14.36 13.66
CDY27338 Canola nucleus, plastid 14.26 13.59
CDY14410 Canola nucleus 14.91 11.95
CDY07678 Canola nucleus 15.21 11.1
CDX95672 Canola plastid 4.29 7.96
CDY71637 Canola nucleus 1.45 3.92
Protein Annotations
Gene3D:1.10.10.60MapMan:12.4.4.1Gene3D:3.40.50.10810Gene3D:3.40.50.300GO:A0A078F4P9UniProt:A0A078F4P9
EnsemblPlants:CDY08401ProteinID:CDY08401ProteinID:CDY08401.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00000155001InterPro:HSA_dom
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:Homeobox-like_sfInterPro:IPR001650InterPro:IPR014001InterPro:IPR014012
InterPro:IPR017877InterPro:IPR038718InterPro:Myb-like_domInterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271
PFAM:PF07529PFscan:PS50090PFscan:PS51192PFscan:PS51194PFscan:PS51204PANTHER:PTHR10799
PANTHER:PTHR10799:SF935SMART:SM00487SMART:SM00490SMART:SM00573InterPro:SNF2-like_sfInterPro:SNF2_N
SUPFAM:SSF46689SUPFAM:SSF52540UniParc:UPI0004EEC23FSEG:seg::
Description
BnaA05g26370DBnaA05g26370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4P9]
Coordinates
chrLK031986:-:41223..49870
Molecular Weight (calculated)
228442.0 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.715
Length
2005 amino acids
Sequence
(BLAST)
0001: MASRGGKSIP DSAMSSKGSK SRPDSDSKPK RHKTLEAPKE PRRPKTHWDH VIEEMIWLSK DFESERKWKL AQAKKVALRA SKGMVDQASR EERKLKEEEQ
0101: RLRKVALNIS KDVKKFWIKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKHGH NESPKPILAI ESKSDEERAE ETPSELNASA
0201: GLESETLDVD EDYDINPEDA SEDDEDTIEE DEKHFTKQER QEELEALQNE VDLPVEELLR RYTSGRVSGE TSPERDENEA NLASVGEDDI EGDKNNLTAS
0301: EETEGSPSVR RSNDSFDHLA VSETHTPDHK PGPKTASVKS GKEDQTYDFN DEQEDVDFVA ATGEEKDDET TLSVEEELAK ADSVDPEDEI ALLQKESEMS
0401: IEELLARYKE DFGGKDLSED DSSDIRQQAD SDDENVESAE CKPALQPCSE KDEGTSNEIK EDDAKDSSDK IADAAAAARS AQPTGFTYST TKVRTKLPFL
0501: LKHSLREYQH IGLDWLVTMY EKRLNGILAD EMGLGKTIMT IALLAHLACD KGIWGPHLIV VPTSVMLNWE TEFLKWCPAF KILTYFGSAK ERKLKRQGWM
0601: KLNSFHVCIT TYRLVIQDSK MFKRKKWKYL ILDEAHLIKN WKSQRWQTLL NFNSKRRILL TGTPLQNDLM ELWSLMHFLM PHVFQSHQEF KDWFCNPIAG
0701: MVEGQDKINR EVIDRLHNVL RPFLLRRLKR DVEKQLPQKH EHVIFCRLSK RQRNLYEDFI ASTETQATLN SGSFFGMISI IMQLRKVCNH PDLFEGRPIV
0801: SSFDMPGIDV QLSSRICSLL LKSPFSRVDL EDLGFVFTHH DFSMTAWEGD EIKAISTPSD LIKQRVDLKD NPEEVPLSLV NRKNLQGTSI FEEIRKAVFE
0901: ERVKESKDRA AAIAWWNSLR CRRKPTYSTS LRTLLTIKGP LDDIRHLKAN RPSYMYSSML ADIVLSPIER FQKVIELVEA FTFAIPAARV PSPACWCSKS
1001: DSPIFLSPSY KEKVTDLLSP LLSPIRPAIV RRQVYFPDRR LIQFDCGKLQ ELAMLLRKLK FGGHRALIFT QMTKMLDILE AFISLYGYTY MRLDGSTPPE
1101: ERQTLMQRFN TNPKIFLFIL STRSGGVGIN LVGADTVIFY DSDWNPAMDQ QAQDRCHRIG QTREVHIYRL ISESTIEENI LKKANQKRAL DNLVIQNGEY
1201: NTEFFKKLDP MELFSGHKTL TRKDEEEKSK NCEAELSLSN ADVEAALKHA EDEADYMALK RVEEEEAVEN QEFTEEPIER PEDDELVNED DIKSDEPADQ
1301: GVAAAGSAKE EVSLVPIDNR DERDDIITLS QEEDNDVPDD VKQMAAAAAA AGQAISSFEN QLRPIDRYAI RFLEVWDPII VEAAIENEAG FEEKEWELDH
1401: IEKYKEEMEA EIDDGEEPLV YEKWDADFAT EAYRQQVEVL TQHQLMEDLE NEAREREAAE EAERRLALNE SAHVLKPKKK KKVKKAKYKS LKKGSLGSES
1501: KQAKTVVKVE ASSDEDNEEC GYVSSSDSDM VSPRLQKRMK GKKRELVFDS DEEKNSKKKA KKHKKSLSHS DIKCKTPHDE LVPSKPSDSM AVDNELKPAN
1601: RGKTLGKKFI ISMPIKRVLM IKPEKLKKGN LWSRDCVPSP DSWLPQEDAV LCAMVHEYGS NWSLVSETLY GMTAGGAYRG RHRHPAYCCE RYRELMQRHV
1701: LSASDSVVNE KNLNAGSGKA LLKVTEENMR ALLNIAAEQP DTEMLLQKHF TCLLSSIWRT STRSTNNQKL SLNKLARKPF QGMKITSLSS KLVESALQDS
1801: STSQPVDTAS RSRLQEDQPI NKVGLDLTLE FPRGNDDSST HFPPIIKLTI DGSDSFNYVN DPPGEDKLKV SRIAAEDRYR NAANACIEDS FGWASNTFPA
1901: YDPKSRSGVK APSLGKHKLS ASDTPKSSKS KQRKLSAAEQ SEVAWVRRND PNLKFDFTPA DREEEEEDKE VSEEIEMRGC PHWYDPLLTS GLDDCSLASE
2001: PSGIE
Best Arabidopsis Sequence Match ( AT3G12810.1 )
(BLAST)
0001: MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
Arabidopsis Description
PIE1Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.