Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37209 | Canola | nucleus | 97.93 | 98.34 |
| Bra037208.1-P | Field mustard | nucleus | 97.81 | 98.22 |
| AT2G13370.2 | Thale cress | nucleus | 89.31 | 87.7 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 26.17 | 77.18 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 71.59 | 68.75 |
| KRH14560 | Soybean | nucleus | 70.29 | 67.46 |
| Solyc12g099910.1.1 | Tomato | nucleus | 67.57 | 67.02 |
| KRH73568 | Soybean | nucleus | 38.33 | 66.63 |
| Os07t0660200-01 | Rice | nucleus | 23.39 | 62.76 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 59.54 | 60.0 |
| Zm00001d022405_P051 | Maize | nucleus | 57.06 | 56.03 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 56.88 | 55.73 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 56.88 | 55.73 |
| KXG36860 | Sorghum | nucleus | 56.82 | 55.7 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 56.82 | 55.67 |
| Zm00001d007089_P003 | Maize | nucleus | 52.75 | 51.41 |
| CDY47176 | Canola | cytosol | 12.64 | 45.15 |
| CDX92595 | Canola | nucleus | 18.31 | 34.68 |
| CDY18857 | Canola | nucleus | 20.2 | 32.6 |
| CDY24695 | Canola | nucleus | 20.14 | 32.38 |
| CDY30755 | Canola | cytosol | 14.47 | 31.65 |
| CDY53848 | Canola | cytosol | 14.41 | 31.65 |
| CDY13907 | Canola | nucleus | 19.73 | 31.54 |
| CDX81370 | Canola | cytosol | 14.18 | 31.33 |
| CDY57125 | Canola | cytosol | 14.18 | 31.33 |
| CDY02609 | Canola | nucleus | 19.31 | 31.0 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 20.26 | 30.27 |
| CDY18960 | Canola | cytosol | 13.76 | 26.81 |
| CDY18840 | Canola | nucleus | 17.13 | 26.78 |
| CDX74702 | Canola | cytosol | 13.59 | 26.44 |
| CDY48619 | Canola | nucleus, plastid | 11.93 | 26.41 |
| CDY04120 | Canola | cytosol | 11.81 | 26.32 |
| CDX75208 | Canola | cytosol | 18.19 | 25.75 |
| CDX68802 | Canola | cytosol | 18.07 | 25.21 |
| CDY56279 | Canola | cytosol | 19.79 | 24.94 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 19.73 | 24.27 |
| CDY67658 | Canola | cytosol, nucleus | 14.06 | 21.08 |
| CDY68094 | Canola | nucleus | 14.41 | 19.57 |
| CDX95673 | Canola | cytosol | 9.57 | 16.46 |
| CDY30994 | Canola | nucleus | 5.85 | 15.47 |
| CDX72050 | Canola | cytosol | 13.29 | 15.27 |
| CDX88940 | Canola | nucleus | 14.35 | 14.69 |
| CDY08401 | Canola | nucleus | 17.13 | 14.46 |
| CDY52874 | Canola | nucleus | 17.19 | 14.43 |
| CDY37083 | Canola | plastid | 17.54 | 14.08 |
| CDY27338 | Canola | nucleus, plastid | 17.48 | 14.07 |
| CDX83383 | Canola | nucleus, plastid | 17.01 | 13.49 |
| CDY14410 | Canola | nucleus | 18.13 | 12.27 |
| CDY06115 | Canola | nucleus | 13.41 | 12.06 |
| CDY07678 | Canola | nucleus | 18.72 | 11.54 |
| CDX95672 | Canola | plastid | 4.96 | 7.78 |
| CDY71637 | Canola | nucleus | 1.77 | 4.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:12.4.1.1.2 | MapMan:15.3.4.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| GO:A0A078CZM9 | EnsemblPlants:CDX81444 | ProteinID:CDX81444 | ProteinID:CDX81444.1 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom |
| InterPro:Chromo_domain | ncoils:Coil | InterPro:DUF4208 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00135027001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 |
| PFAM:PF13907 | PFscan:PS50013 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF952 |
| SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01176 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI0004EE8E48 | SEG:seg | : | : |
Description
BnaC09g08550D
Coordinates
chrLK031824:-:1826486..1837348
Molecular Weight (calculated)
193136.0 Da
IEP (calculated)
5.536
GRAVY (calculated)
-0.780
Length
1693 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFRNYSND TVSPSALDDN QDAATFQSSS PLHQDMDATY TERGFDMNMD IQYQCEAEPG SSIGQQNQTG AAVPSGRRTG VSGKWGSTFW KDCQPMGQRD
0101: GSGSAKHSLS GYKHSEDYLS NGEKLDSENE NDEDIAMNKQ QSGQADIPAE EMLSDEYYEQ DEDSQSDHVQ YKAFGDPINS RSLPKTGSSI HSKSRTSRAI
0201: QKNIHYGDAD IDYEEEEDED DPEDADFEPY DAASGGDASK KHDQDWDVSD EDPDSDDDFD LPDSEDDYDT KKPKARQQGK GFRKLSSGLD RKSAQASSRQ
0301: KRKPSYQEDF SEDDSDNEID EGFRSMPRRG TILGKNNGRS TNNIGQSSEV RSSTRSVRKV SYVESEDSEE IDDGRNRKTQ KDDIEEEDCD AIEKVLWHQP
0401: KGMSGDAHTN KKLTVPVLLS QLFDTQPDWN ETEFLIKWKG QSHLHCQWKS LSDLQNLSGF KKVLNYTKKV TEEIRYRTAL SREEIEVSDV SKEMDVDIIK
0501: QNCQVERIIA DRISKDDLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQA AIDEYKAREV SIAVQGKMVE QQRTKGKASL RKLEEQPEWL SGGTLRDYQL
0601: QGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPDM NIIVYVGTRA SREVCQQYEF YNEKNVGRPI
0701: KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW ALLHFLDPAK FKNKDEFVQN YKNLSSFNES
0801: ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI VVELKKCCNH PFLFESADHG YGGDINDNTK
0901: LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH FNAPASDDFC FLLSTRAGGL GINLATADTV
1001: VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR ETKKGANFDK NELSAILRFG AEELFKEDKN
1101: DEESKKRLLS MDIDEILERA EQVEEKDAGE SEHELLGVFK ASSYVANFCN AEDDGSFWSR WIKPESVVTA DEALAPRAAR NTKSYVDHDR SQPDRTSKRK
1201: KKGSEPPDRS QKRRKTEYFV PSTPILEGTT AQVRGWSYGN LPKRDAQRFY RTVMKFGNHN QIACIAEEVG GVVEAAPEEA QVELFDALID GCRESVETED
1301: FESKGPVLDF FGVPVKANEL LKRVEGLQLL SKRISRYDDP ITQFRVLSYL KPSNWSKGCG WNQIDDARLL LGILYHGFGN WEKIRLDESL GLTKKIAPVE
1401: LQHHETFLPR APNLKERATA LLEMELSAAG GKNTNAKASR KNSKKVVINQ LKAPARDRKG KSGPANLITT KDVGPRRTQK AEPLLVKEEG EMSDDEEVYE
1501: QFKEQKWMEW CEDVLAGEIK TLERLQRLQT ISADLPKEKV LFKIRRYLQI LGRRIDEVVL EHEEDSYKQD RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ
1601: EREEEEGVGP SHLNGSTAGR RQQRFKTPGP PQVHKGIDTA KFEAWKRRKR TENNDVHQSE RPLISNNSNS LGILGPAPSD RSHRARQAGF PPR
0101: GSGSAKHSLS GYKHSEDYLS NGEKLDSENE NDEDIAMNKQ QSGQADIPAE EMLSDEYYEQ DEDSQSDHVQ YKAFGDPINS RSLPKTGSSI HSKSRTSRAI
0201: QKNIHYGDAD IDYEEEEDED DPEDADFEPY DAASGGDASK KHDQDWDVSD EDPDSDDDFD LPDSEDDYDT KKPKARQQGK GFRKLSSGLD RKSAQASSRQ
0301: KRKPSYQEDF SEDDSDNEID EGFRSMPRRG TILGKNNGRS TNNIGQSSEV RSSTRSVRKV SYVESEDSEE IDDGRNRKTQ KDDIEEEDCD AIEKVLWHQP
0401: KGMSGDAHTN KKLTVPVLLS QLFDTQPDWN ETEFLIKWKG QSHLHCQWKS LSDLQNLSGF KKVLNYTKKV TEEIRYRTAL SREEIEVSDV SKEMDVDIIK
0501: QNCQVERIIA DRISKDDLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQA AIDEYKAREV SIAVQGKMVE QQRTKGKASL RKLEEQPEWL SGGTLRDYQL
0601: QGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPDM NIIVYVGTRA SREVCQQYEF YNEKNVGRPI
0701: KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW ALLHFLDPAK FKNKDEFVQN YKNLSSFNES
0801: ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI VVELKKCCNH PFLFESADHG YGGDINDNTK
0901: LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH FNAPASDDFC FLLSTRAGGL GINLATADTV
1001: VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR ETKKGANFDK NELSAILRFG AEELFKEDKN
1101: DEESKKRLLS MDIDEILERA EQVEEKDAGE SEHELLGVFK ASSYVANFCN AEDDGSFWSR WIKPESVVTA DEALAPRAAR NTKSYVDHDR SQPDRTSKRK
1201: KKGSEPPDRS QKRRKTEYFV PSTPILEGTT AQVRGWSYGN LPKRDAQRFY RTVMKFGNHN QIACIAEEVG GVVEAAPEEA QVELFDALID GCRESVETED
1301: FESKGPVLDF FGVPVKANEL LKRVEGLQLL SKRISRYDDP ITQFRVLSYL KPSNWSKGCG WNQIDDARLL LGILYHGFGN WEKIRLDESL GLTKKIAPVE
1401: LQHHETFLPR APNLKERATA LLEMELSAAG GKNTNAKASR KNSKKVVINQ LKAPARDRKG KSGPANLITT KDVGPRRTQK AEPLLVKEEG EMSDDEEVYE
1501: QFKEQKWMEW CEDVLAGEIK TLERLQRLQT ISADLPKEKV LFKIRRYLQI LGRRIDEVVL EHEEDSYKQD RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ
1601: EREEEEGVGP SHLNGSTAGR RQQRFKTPGP PQVHKGIDTA KFEAWKRRKR TENNDVHQSE RPLISNNSNS LGILGPAPSD RSHRARQAGF PPR
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.