Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67658 | Canola | cytosol, nucleus | 88.61 | 97.87 |
| Bra027574.1-P | Field mustard | nucleus | 94.95 | 53.29 |
| AT5G44800.1 | Thale cress | nucleus | 82.92 | 46.51 |
| VIT_01s0011g01480.t01 | Wine grape | nucleus | 60.47 | 34.96 |
| CDY47176 | Canola | cytosol | 12.27 | 32.28 |
| KRH42374 | Soybean | nucleus | 55.33 | 31.89 |
| KRH58495 | Soybean | nucleus | 58.3 | 31.13 |
| Solyc02g068560.2.1 | Tomato | nucleus | 55.65 | 29.12 |
| GSMUA_Achr9P11210_001 | Banana | nucleus | 46.91 | 28.43 |
| KXG36264 | Sorghum | nucleus | 49.08 | 27.52 |
| Os07t0497100-01 | Rice | nucleus | 49.32 | 27.22 |
| Zm00001d006428_P002 | Maize | nucleus | 47.79 | 27.21 |
| Zm00001d021541_P002 | Maize | nucleus | 48.52 | 27.19 |
| TraesCS2B01G251900.1 | Wheat | nucleus | 48.76 | 27.13 |
| TraesCS2D01G234200.1 | Wheat | nucleus | 48.84 | 27.1 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 48.44 | 26.9 |
| GSMUA_Achr6P29570_001 | Banana | nucleus | 42.82 | 24.93 |
| CDX92595 | Canola | nucleus | 16.36 | 22.82 |
| CDY18960 | Canola | cytosol | 15.08 | 21.63 |
| CDX74702 | Canola | cytosol | 15.08 | 21.61 |
| CDY53848 | Canola | cytosol | 13.23 | 21.4 |
| CDX81370 | Canola | cytosol | 13.07 | 21.28 |
| CDY57125 | Canola | cytosol | 13.07 | 21.28 |
| CDY30755 | Canola | cytosol | 13.15 | 21.19 |
| CDY24695 | Canola | nucleus | 17.56 | 20.8 |
| CDY18857 | Canola | nucleus | 17.32 | 20.59 |
| CDY13907 | Canola | nucleus | 17.4 | 20.49 |
| CDX68802 | Canola | cytosol | 19.89 | 20.43 |
| CDX75208 | Canola | cytosol | 19.57 | 20.4 |
| CDY02609 | Canola | nucleus | 16.76 | 19.81 |
| CDY56279 | Canola | cytosol | 21.33 | 19.81 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 17.64 | 19.42 |
| CDY48619 | Canola | nucleus, plastid | 11.87 | 19.35 |
| CDY04120 | Canola | cytosol | 11.79 | 19.34 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 21.33 | 19.33 |
| CDY18840 | Canola | nucleus | 15.0 | 17.27 |
| CDX95673 | Canola | cytosol | 11.55 | 14.63 |
| CDY37209 | Canola | nucleus | 19.57 | 14.47 |
| CDX81444 | Canola | nucleus | 19.57 | 14.41 |
| CDX88940 | Canola | nucleus | 14.19 | 10.7 |
| CDX72050 | Canola | cytosol | 12.51 | 10.59 |
| CDY52874 | Canola | nucleus | 16.52 | 10.21 |
| CDY08401 | Canola | nucleus | 16.36 | 10.17 |
| CDY27338 | Canola | nucleus, plastid | 15.72 | 9.32 |
| CDY37083 | Canola | plastid | 15.72 | 9.29 |
| CDX83383 | Canola | nucleus, plastid | 15.4 | 8.99 |
| CDY06115 | Canola | nucleus | 12.67 | 8.39 |
| CDY14410 | Canola | nucleus | 16.28 | 8.11 |
| CDY07678 | Canola | nucleus | 16.6 | 7.53 |
| CDY30994 | Canola | nucleus | 3.77 | 7.34 |
| CDX95672 | Canola | plastid | 0.24 | 0.28 |
| CDY71637 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.4.1.1.5 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078JMP7 | UniProt:A0A078JMP7 | EnsemblPlants:CDY68094 |
| ProteinID:CDY68094 | ProteinID:CDY68094.1 | InterPro:DUF1087 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00069238001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF06465 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF939 | SMART:SM00490 | SMART:SM01147 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0004EF3D4B | SEG:seg | : | : |
Description
BnaCnng57570DBnaCnng57570D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JMP7]
Coordinates
chrLK036849:+:2..5576
Molecular Weight (calculated)
140100.0 Da
IEP (calculated)
5.632
GRAVY (calculated)
-0.650
Length
1247 amino acids
Sequence
(BLAST)
(BLAST)
0001: SEFSLWAPLL NVVDSTETTK KMKPYKFNVL LTTYEMVLAD SSHLRGVPWE VLVVDEGHRL KNSESKLFSL LNTFSFQHRV LLTGTPLQNN IGEMYNLLNF
0101: LQPSSFPSLS SFEEKFHDLT SAEKVEELKK LVAPHMLRRL KKDAMQNIPP KTERMVPVEL TSIQAEYYRA MLTKNYQILR NIGKGVAQQS MLNIVMQLRK
0201: VCNHPYLIPG TEPESGSLEF LHDMRIKASA KLTLLHSMLK VLHKEGHRVL IFSQMTKLLD ILEDYLNVEF GPKTFERVDG SVAVADRQAA IARFNQDKNR
0301: FVFLLSTRAC GLGINLATAD TVIIYDSDFN PHADIQAMNR AHRIGQSKQL LVYRLVVRAS VEERILQLAK KKLMLDQLFV NKSGSQKEFE DILRWGTEEL
0401: FNDSAGANKK DTSESNGNLD VIMDLESKSR KKGGGLGDVY QDKCTDGNGK IVWDETAIMK LLDRTNIQSP STDGADTELE NDMLGSVKPV EWNEETAEEQ
0501: VGAESPPLVA DDTDEHSSER KDDDVVTFTE ENDWDRLLRM RWKRYQSEEE ATLGRGKRLR KAVSYREAYA PNTSGAVVED GGEDEKEPEL KKEYTPAGRA
0601: LKDKFTKLRE RQKNRLAKRN AVEDSIPNGN VDQNVHHLYP RTICRFLDCV LLILRNQNPP GEIILVQVVD RTGPYQDLIF LSREVNNQEP SMGNLKPHNV
0701: KEEPSQQPPL SNMDGWLPVR PFPPSGDFER PRSSGAALAE FQEKFPLLNL PFDDKLLPRF PFQQRNMGTS HQEIMANLSL RKRFEGSGHS MQDLFSMPPM
0801: PFLPNMKVPP VDPPVFSQQE ELPPLGLDQF SSALSSIPEN HRKVLENIIH GYGNWETILR DPRLKFSKFK CPEYLAARWE EEQRKFLDSL SSLPSKSSRT
0901: DKSTKTPLFP GLPQGIMNRA LHGTKYATPP RFQSHLTDIK LGFNDLASTL PLFESSNHLG LRSEPFPPLD LSGDPSAGPS NTPSDKPFPL NSLGMGNLDM
1001: QLPPMLDSSN NVFLGRSANP SLLDPNRVMN LSNPMGKDVL GGTSTSENKL PHWLRDAVTP PPPVPRDPRH SLRKKKKRKS RPSSQMTTDI ASSSHNVAES
1101: SSQGNPPTPP LLPPSLSEPS SSEPIRVPAP QEDSVVAEEP SEVPKPSLEE VTGTSKSVSP ESKISEPKST NEDGDSDLET CEKNEADQLM IHSDDKHLDV
1201: KQEEQQSEDA SNKQCEPTEA ETPNMDAEQE DKGESVKMVI DISPGDN
0101: LQPSSFPSLS SFEEKFHDLT SAEKVEELKK LVAPHMLRRL KKDAMQNIPP KTERMVPVEL TSIQAEYYRA MLTKNYQILR NIGKGVAQQS MLNIVMQLRK
0201: VCNHPYLIPG TEPESGSLEF LHDMRIKASA KLTLLHSMLK VLHKEGHRVL IFSQMTKLLD ILEDYLNVEF GPKTFERVDG SVAVADRQAA IARFNQDKNR
0301: FVFLLSTRAC GLGINLATAD TVIIYDSDFN PHADIQAMNR AHRIGQSKQL LVYRLVVRAS VEERILQLAK KKLMLDQLFV NKSGSQKEFE DILRWGTEEL
0401: FNDSAGANKK DTSESNGNLD VIMDLESKSR KKGGGLGDVY QDKCTDGNGK IVWDETAIMK LLDRTNIQSP STDGADTELE NDMLGSVKPV EWNEETAEEQ
0501: VGAESPPLVA DDTDEHSSER KDDDVVTFTE ENDWDRLLRM RWKRYQSEEE ATLGRGKRLR KAVSYREAYA PNTSGAVVED GGEDEKEPEL KKEYTPAGRA
0601: LKDKFTKLRE RQKNRLAKRN AVEDSIPNGN VDQNVHHLYP RTICRFLDCV LLILRNQNPP GEIILVQVVD RTGPYQDLIF LSREVNNQEP SMGNLKPHNV
0701: KEEPSQQPPL SNMDGWLPVR PFPPSGDFER PRSSGAALAE FQEKFPLLNL PFDDKLLPRF PFQQRNMGTS HQEIMANLSL RKRFEGSGHS MQDLFSMPPM
0801: PFLPNMKVPP VDPPVFSQQE ELPPLGLDQF SSALSSIPEN HRKVLENIIH GYGNWETILR DPRLKFSKFK CPEYLAARWE EEQRKFLDSL SSLPSKSSRT
0901: DKSTKTPLFP GLPQGIMNRA LHGTKYATPP RFQSHLTDIK LGFNDLASTL PLFESSNHLG LRSEPFPPLD LSGDPSAGPS NTPSDKPFPL NSLGMGNLDM
1001: QLPPMLDSSN NVFLGRSANP SLLDPNRVMN LSNPMGKDVL GGTSTSENKL PHWLRDAVTP PPPVPRDPRH SLRKKKKRKS RPSSQMTTDI ASSSHNVAES
1101: SSQGNPPTPP LLPPSLSEPS SSEPIRVPAP QEDSVVAEEP SEVPKPSLEE VTGTSKSVSP ESKISEPKST NEDGDSDLET CEKNEADQLM IHSDDKHLDV
1201: KQEEQQSEDA SNKQCEPTEA ETPNMDAEQE DKGESVKMVI DISPGDN
0001: MKDSGSEMIK RDWVMKQKRR KLPSILDILD QKVDSSMAFD SPEYTSSSKP SKQRLKTDST PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
Arabidopsis Description
CHR4PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.