Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47176 | Canola | cytosol | 50.0 | 94.3 |
| Bra002173.1-P | Field mustard | nucleus | 99.66 | 83.74 |
| CDY13907 | Canola | nucleus | 98.43 | 83.1 |
| AT5G18620.2 | Thale cress | nucleus | 91.83 | 76.59 |
| CDY24695 | Canola | nucleus | 86.47 | 73.41 |
| CDY18857 | Canola | nucleus | 86.13 | 73.4 |
| VIT_05s0020g01780.t01 | Wine grape | nucleus | 85.35 | 70.65 |
| KRH21031 | Soybean | nucleus | 84.0 | 70.38 |
| CDY02609 | Canola | nucleus | 83.0 | 70.33 |
| KRH11241 | Soybean | nucleus | 84.12 | 70.15 |
| Solyc06g054560.2.1 | Tomato | nucleus | 82.44 | 69.46 |
| PGSC0003DMT400058376 | Potato | nucleus | 82.66 | 69.45 |
| Solyc01g067390.2.1 | Tomato | nucleus | 82.66 | 69.39 |
| PGSC0003DMT400079102 | Potato | nucleus | 82.1 | 69.38 |
| KRH50913 | Soybean | nucleus | 81.66 | 69.0 |
| KRH02212 | Soybean | nucleus | 80.98 | 68.37 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 86.47 | 68.23 |
| GSMUA_Achr8P09960_001 | Banana | nucleus | 81.99 | 67.81 |
| GSMUA_Achr3P23910_001 | Banana | nucleus | 77.85 | 65.11 |
| Os01t0367900-01 | Rice | nucleus | 80.54 | 65.04 |
| KXG32501 | Sorghum | nucleus | 80.2 | 64.77 |
| TraesCS1D01G099600.1 | Wheat | nucleus | 79.87 | 64.5 |
| TraesCS1B01G118900.2 | Wheat | nucleus | 79.64 | 64.38 |
| TraesCS1A01G091100.1 | Wheat | nucleus | 79.19 | 64.01 |
| Zm00001d040831_P021 | Maize | nucleus | 79.75 | 63.66 |
| Zm00001d009312_P028 | Maize | nucleus | 80.31 | 63.54 |
| Os05t0150300-01 | Rice | nucleus | 79.42 | 61.31 |
| TraesCS3D01G068900.1 | Wheat | nucleus | 76.73 | 61.2 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 76.85 | 60.8 |
| TraesCS3B01G083400.1 | Wheat | nucleus | 76.96 | 60.67 |
| HORVU1Hr1G021540.17 | Barley | plasma membrane | 79.87 | 60.46 |
| HORVU3Hr1G012850.1 | Barley | nucleus | 75.5 | 59.58 |
| CDY30755 | Canola | cytosol | 29.87 | 34.5 |
| CDY53848 | Canola | cytosol | 29.64 | 34.37 |
| CDX81370 | Canola | cytosol | 28.97 | 33.81 |
| CDY57125 | Canola | cytosol | 28.75 | 33.55 |
| CDY04120 | Canola | cytosol | 22.26 | 26.18 |
| CDY48619 | Canola | nucleus, plastid | 22.15 | 25.88 |
| CDY18840 | Canola | nucleus | 31.21 | 25.76 |
| CDY18960 | Canola | cytosol | 24.94 | 25.66 |
| CDX74702 | Canola | cytosol | 24.83 | 25.52 |
| CDX75208 | Canola | cytosol | 27.96 | 20.9 |
| CDX68802 | Canola | cytosol | 28.19 | 20.76 |
| CDY56279 | Canola | cytosol | 29.53 | 19.66 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 29.75 | 19.33 |
| CDY37209 | Canola | nucleus | 34.68 | 18.39 |
| CDX81444 | Canola | nucleus | 34.68 | 18.31 |
| CDY67658 | Canola | cytosol, nucleus | 22.6 | 17.89 |
| CDY68094 | Canola | nucleus | 22.82 | 16.36 |
| CDY30994 | Canola | nucleus | 11.41 | 15.94 |
| CDX72050 | Canola | cytosol | 24.94 | 15.14 |
| CDX88940 | Canola | nucleus | 26.85 | 14.51 |
| CDX95673 | Canola | cytosol | 15.44 | 14.02 |
| CDY08401 | Canola | nucleus | 29.98 | 13.37 |
| CDY52874 | Canola | nucleus | 30.09 | 13.34 |
| CDY27338 | Canola | nucleus, plastid | 28.64 | 12.17 |
| CDY37083 | Canola | plastid | 28.64 | 12.14 |
| CDX83383 | Canola | nucleus, plastid | 28.97 | 12.13 |
| CDY06115 | Canola | nucleus | 25.17 | 11.95 |
| CDY14410 | Canola | nucleus | 30.2 | 10.79 |
| CDY07678 | Canola | nucleus | 30.09 | 9.79 |
| CDX95672 | Canola | plastid | 8.39 | 6.94 |
| CDY71637 | Canola | nucleus | 2.46 | 2.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:12.4.1.1.4 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078DTD2 | EnsemblPlants:CDX92595 |
| ProteinID:CDX92595 | ProteinID:CDX92595.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006338 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016589 | GO:GO:0016787 | GO:GO:0016818 | GO:GO:0016887 | GO:GO:0043044 | EnsemblPlantsGene:GSBRNA2T00154392001 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:ISWI | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF09111 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF887 | InterPro:SLIDE | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF46689 | SUPFAM:SSF52540 | UniParc:UPI0004EDC22A | SEG:seg |
Description
BnaA10g16340D
Coordinates
chrLK031872:+:1435692..1440638
Molecular Weight (calculated)
102936.0 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.736
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: MARASNREVS SDEAYSSSEE DERVNDQVNV EEDDEELQAV ARSADSNEEE EEVAPDEALV SDDEVVPVED DADEDEEDDE KAEIRKREKA RLKEMQKMKK
101: QKIQEILDAQ NASIDKDMNN KGKGRLTYLL QQTELFAHFA KSEPSSSQKK GKGRGRHASK LTEEEEDQEC LKEEEGAISG SGGTRLLTQP SCIQGKMRDY
201: QLAGLNWLIR LYENGINGIL ADEMGLGKTL QTISLLAYLH EFKGINGPHM IVTPKSTIGN WMNEIRRFCP VLRAVKFLGN PEERRYIRDE LLVVGKFDVC
301: VTSFEMAIKE KTSLRRFSWR YIIIDEAHRI KNENSLLSKT MRLFSTNYRL LITGTPLQNN LHELWALLNF LLPEVFSSAE TFDEWFQISG ENDQQEVVQQ
401: LHKVLRPFLL RRLKSDVEKG LPPKKETILK VGLSQMQKQY YKALLQKDLE VVNGGGERKR LLNIAMQLRK CCNHPYLFQG AEPGPPYTTG DHLVTNSGKM
501: ILLDKLLPKL KERDSRVLIF SQMTRLLDIL EDYMLYRGYQ YCRIDGNTGG DERDASIEAY NKPGSEKFVF LLSTRAGGLG INLATADIVI LYDSDWNPQV
601: DLQAQDRAHR IGQKKEVQVF RFCTENAIEE KVIERAYKKL ALDALVIQQG RLAEQKTVNK DELLQMVRYG AEMVFSSKDS TITDEDIDRI IAKGEEATAE
701: LDAKMKKFTE DAIQFKMDDP ADLYDFDDDN KDENKLDFKK IVSENWNDPP KRERKRKNPW LELKIQYGQN KGKLYNEECD RFLVCMVHKL GYGNWDELKT
801: AFKTSPLFSF DWFVKSRSSQ ELARRCDTLI RLIEKENQEH DEAERRARRD KKLAKNATPS KRASGSQANE SPTFVKKRKQ LSMDDFVTSG KRRK
101: QKIQEILDAQ NASIDKDMNN KGKGRLTYLL QQTELFAHFA KSEPSSSQKK GKGRGRHASK LTEEEEDQEC LKEEEGAISG SGGTRLLTQP SCIQGKMRDY
201: QLAGLNWLIR LYENGINGIL ADEMGLGKTL QTISLLAYLH EFKGINGPHM IVTPKSTIGN WMNEIRRFCP VLRAVKFLGN PEERRYIRDE LLVVGKFDVC
301: VTSFEMAIKE KTSLRRFSWR YIIIDEAHRI KNENSLLSKT MRLFSTNYRL LITGTPLQNN LHELWALLNF LLPEVFSSAE TFDEWFQISG ENDQQEVVQQ
401: LHKVLRPFLL RRLKSDVEKG LPPKKETILK VGLSQMQKQY YKALLQKDLE VVNGGGERKR LLNIAMQLRK CCNHPYLFQG AEPGPPYTTG DHLVTNSGKM
501: ILLDKLLPKL KERDSRVLIF SQMTRLLDIL EDYMLYRGYQ YCRIDGNTGG DERDASIEAY NKPGSEKFVF LLSTRAGGLG INLATADIVI LYDSDWNPQV
601: DLQAQDRAHR IGQKKEVQVF RFCTENAIEE KVIERAYKKL ALDALVIQQG RLAEQKTVNK DELLQMVRYG AEMVFSSKDS TITDEDIDRI IAKGEEATAE
701: LDAKMKKFTE DAIQFKMDDP ADLYDFDDDN KDENKLDFKK IVSENWNDPP KRERKRKNPW LELKIQYGQN KGKLYNEECD RFLVCMVHKL GYGNWDELKT
801: AFKTSPLFSF DWFVKSRSSQ ELARRCDTLI RLIEKENQEH DEAERRARRD KKLAKNATPS KRASGSQANE SPTFVKKRKQ LSMDDFVTSG KRRK
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.