Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G069900.2 | Wheat | nucleus | 90.73 | 90.97 |
| TraesCS3D01G068900.1 | Wheat | nucleus | 89.94 | 90.9 |
| TraesCS3B01G083400.1 | Wheat | nucleus | 90.56 | 90.48 |
| CDY47176 | Canola | cytosol | 36.19 | 86.5 |
| Os01t0367900-01 | Rice | nucleus | 79.35 | 81.21 |
| KXG32501 | Sorghum | nucleus | 78.73 | 80.58 |
| Zm00001d009312_P028 | Maize | nucleus | 78.46 | 78.67 |
| Zm00001d040831_P021 | Maize | nucleus | 77.76 | 78.66 |
| CDY18857 | Canola | nucleus | 72.02 | 77.79 |
| Bra040221.1-P | Field mustard | nucleus | 71.93 | 77.69 |
| KRH21031 | Soybean | nucleus | 73.08 | 77.6 |
| AT3G06400.3 | Thale cress | nucleus | 72.11 | 77.29 |
| KRH50913 | Soybean | nucleus | 72.02 | 77.13 |
| KRH02212 | Soybean | nucleus | 71.93 | 76.96 |
| KRH11241 | Soybean | nucleus | 72.82 | 76.96 |
| CDY24695 | Canola | nucleus | 71.32 | 76.73 |
| VIT_05s0020g01780.t01 | Wine grape | nucleus | 73.08 | 76.67 |
| Bra020751.1-P | Field mustard | nucleus | 71.23 | 76.64 |
| PGSC0003DMT400079102 | Potato | nucleus | 71.4 | 76.47 |
| AT5G18620.2 | Thale cress | nucleus | 72.11 | 76.21 |
| Solyc06g054560.2.1 | Tomato | nucleus | 71.32 | 76.15 |
| PGSC0003DMT400058376 | Potato | nucleus | 71.23 | 75.85 |
| CDX92595 | Canola | nucleus | 59.58 | 75.5 |
| Solyc01g067390.2.1 | Tomato | nucleus | 70.87 | 75.4 |
| GSMUA_Achr3P23910_001 | Banana | nucleus | 71.14 | 75.4 |
| CDY13907 | Canola | nucleus | 69.99 | 74.88 |
| Bra002173.1-P | Field mustard | nucleus | 69.99 | 74.53 |
| CDY02609 | Canola | nucleus | 67.61 | 72.61 |
| HORVU1Hr1G021540.17 | Barley | plasma membrane | 74.93 | 71.89 |
| Bra023689.1-P | Field mustard | nucleus | 69.46 | 71.48 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 71.32 | 71.32 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 19.86 | 39.2 |
| HORVU4Hr1G088540.8 | Barley | cytosol | 20.21 | 25.96 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 21.54 | 16.04 |
| HORVU6Hr1G006050.1 | Barley | plastid | 23.65 | 12.1 |
| HORVU7Hr1G041450.33 | Barley | nucleus | 26.04 | 11.79 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:1.10.1040.30 | Gene3D:1.20.5.1190 | MapMan:12.4.1.1.4 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006338 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016589 |
| GO:GO:0016787 | GO:GO:0016818 | GO:GO:0016887 | GO:GO:0031491 | GO:GO:0043044 | EnsemblPlantsGene:HORVU3Hr1G012850 |
| EnsemblPlants:HORVU3Hr1G012850.1 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR017884 | InterPro:IPR036306 | InterPro:IPR038718 | InterPro:ISWI | InterPro:ISWI_HAND-dom | InterPro:ISWI_HAND-dom_sf |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF09110 | PFAM:PF09111 | PFscan:PS51192 |
| PFscan:PS51194 | PFscan:PS51293 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF887 | InterPro:SANT/Myb | InterPro:SANT_dom |
| InterPro:SLIDE | SMART:SM00487 | SMART:SM00490 | SMART:SM00717 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF101224 | SUPFAM:SSF46689 | SUPFAM:SSF52540 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:27797882..27806862
Molecular Weight (calculated)
129327.0 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.805
Length
1133 amino acids
Sequence
(BLAST)
(BLAST)
0001: XEEEEESSVE EQQGRPDAGG SGSGGEGGAG QAEEEEIDEE EIEAVTTGAG ADDEGEEDGE GDEEEPEPTD DDEAEEDTSG NPVVGKQERA RLRQLQKLKK
0101: QKIKEILQTQ NAAIDADMNK KGQGRLKYLL QQTEIFSHFA DGSKPKDKKP RGRGRPSTKR AVDEEDEEYL EEEDALGSSG GTHLLVQPSC INGQMRDYQL
0201: AGLNWLIRLY ENGINGILAD EMGLGKTLQT ISLMGYLHEY RGITGPHMVV APKSTLGNWM NEIARFCPIL RAVKFLGNPE ERNHIRENLL QPGKFDVCVT
0301: SFEMAIKEKN ALKRFSWRYI IIDEAHRIKN ENSLLSKTMR LFSTNYRLLI TGTPLQNNLH ELWSLLNFLL PEIFSSAETF DEWFQITGEN DQQEVVQQLH
0401: KVLRPFLLRR LKSDVEKGLP PKKEIILKVG MSQMQKQYYR GLLQKDLELI NAGGERKRLL NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LVETAGKMVL
0501: LDKLLPKLKD RDSRVLIFSQ MTRLLDILED YLVYRGYQYC RIDGSTGGDD RDASIDAFNK PGSEKFVFLL STRAGGLGIN LATADVVILY DSDWNPQADL
0601: QAQDRAHRIG QKKEVQVFRF CTEYTIEEKV IERAYKKLAL DALVIQQGRL SGQKTVNKDD LLQMVRFGAE MVFSSKDSTI TDEDVDRIIA KGEETKAALD
0701: AKMKKFTEDA IKFKMDDTAE LYDFDGDKEE DNADFKKIVA ENLVVELPRR ERIKSYNESE YFKQALRQAA PAKPKELRIP KMPTLHDFQF FNSQRLNELY
0801: EKEVRYLVQA NQKKDTTDGE DEDQLEPFTA EDEAEKKQLL EAGFATWAKR DFNTFIRACE KYGRNDMKSI SSEMEGKSEE EVQRYAEVFK ERYKELSDYE
0901: RIMKNIERGE GRINRKDVIM TAIGKKLDRY KNPWLELKVQ YGTSKGKFYT EECDRFMLCM AHKLGYGKWD ELRAAFRKSP LFRFDWFVKA RSAQELARRC
1001: DTLVRLIEKE NQEYDERERQ ARKEKRLAKK MTPTKQKMTP TKQKITPTKQ KMTPTKEKKT PTKGAASKVS DGQTAPAASS KKKMTPTKQK MTPSKRAASR
1101: VSDGETAAPA TSSKKRRQSL MDDFLGSGKK GKA
0101: QKIKEILQTQ NAAIDADMNK KGQGRLKYLL QQTEIFSHFA DGSKPKDKKP RGRGRPSTKR AVDEEDEEYL EEEDALGSSG GTHLLVQPSC INGQMRDYQL
0201: AGLNWLIRLY ENGINGILAD EMGLGKTLQT ISLMGYLHEY RGITGPHMVV APKSTLGNWM NEIARFCPIL RAVKFLGNPE ERNHIRENLL QPGKFDVCVT
0301: SFEMAIKEKN ALKRFSWRYI IIDEAHRIKN ENSLLSKTMR LFSTNYRLLI TGTPLQNNLH ELWSLLNFLL PEIFSSAETF DEWFQITGEN DQQEVVQQLH
0401: KVLRPFLLRR LKSDVEKGLP PKKEIILKVG MSQMQKQYYR GLLQKDLELI NAGGERKRLL NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LVETAGKMVL
0501: LDKLLPKLKD RDSRVLIFSQ MTRLLDILED YLVYRGYQYC RIDGSTGGDD RDASIDAFNK PGSEKFVFLL STRAGGLGIN LATADVVILY DSDWNPQADL
0601: QAQDRAHRIG QKKEVQVFRF CTEYTIEEKV IERAYKKLAL DALVIQQGRL SGQKTVNKDD LLQMVRFGAE MVFSSKDSTI TDEDVDRIIA KGEETKAALD
0701: AKMKKFTEDA IKFKMDDTAE LYDFDGDKEE DNADFKKIVA ENLVVELPRR ERIKSYNESE YFKQALRQAA PAKPKELRIP KMPTLHDFQF FNSQRLNELY
0801: EKEVRYLVQA NQKKDTTDGE DEDQLEPFTA EDEAEKKQLL EAGFATWAKR DFNTFIRACE KYGRNDMKSI SSEMEGKSEE EVQRYAEVFK ERYKELSDYE
0901: RIMKNIERGE GRINRKDVIM TAIGKKLDRY KNPWLELKVQ YGTSKGKFYT EECDRFMLCM AHKLGYGKWD ELRAAFRKSP LFRFDWFVKA RSAQELARRC
1001: DTLVRLIEKE NQEYDERERQ ARKEKRLAKK MTPTKQKMTP TKQKITPTKQ KMTPTKEKKT PTKGAASKVS DGQTAPAASS KKKMTPTKQK MTPSKRAASR
1101: VSDGETAAPA TSSKKRRQSL MDDFLGSGKK GKA
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.