Factsheet for Bra040221.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18857	Canola	nucleus	99.52	99.52
AT3G06400.3	Thale cress	nucleus	95.33	94.61
Bra020751.1-P	Field mustard	nucleus	94.95	94.59
Bra002173.1-P	Field mustard	nucleus	88.08	86.84
KRH21031	Soybean	nucleus	88.08	86.6
KRH11241	Soybean	nucleus	88.37	86.47
KRH50913	Soybean	nucleus	86.65	85.92
VIT_05s0020g01780.t01	Wine grape	nucleus	88.08	85.56
KRH02212	Soybean	nucleus	86.08	85.27
PGSC0003DMT400058376	Potato	nucleus	85.51	84.3
Solyc01g067390.2.1	Tomato	nucleus	85.51	84.23
PGSC0003DMT400079102	Potato	nucleus	84.65	83.93
Solyc06g054560.2.1	Tomato	nucleus	84.56	83.6
GSMUA_Achr8P09960_001	Banana	nucleus	84.18	81.68
Bra023689.1-P	Field mustard	nucleus	84.94	80.93
GSMUA_Achr3P23910_001	Banana	nucleus	81.7	80.17
KXG32501	Sorghum	nucleus	83.22	78.86
Os01t0367900-01	Rice	nucleus	83.03	78.68
TraesCS1D01G099600.1	Wheat	nucleus	82.46	78.14
TraesCS1B01G118900.2	Wheat	nucleus	82.36	78.12
TraesCS1A01G091100.1	Wheat	nucleus	82.08	77.85
Zm00001d040831_P021	Maize	nucleus	82.94	77.68
Zm00001d009312_P028	Maize	nucleus	83.51	77.52
Os05t0150300-01	Rice	nucleus	82.65	74.87
TraesCS3D01G068900.1	Wheat	nucleus	78.27	73.24
HORVU1Hr1G021540.17	Barley	plasma membrane	82.27	73.07
TraesCS3B01G083400.1	Wheat	nucleus	78.84	72.93
TraesCS3A01G069900.2	Wheat	nucleus	78.27	72.65
HORVU3Hr1G012850.1	Barley	nucleus	77.69	71.93
Bra012099.1-P	Field mustard	cytosol	26.41	35.93
Bra040237.1-P	Field mustard	nucleus	27.93	26.64
Bra017422.1-P	Field mustard	cytosol	18.97	26.12
Bra037150.1-P	Field mustard	nucleus	25.74	22.52
Bra004881.1-P	Field mustard	nucleus	13.82	22.41
Bra011311.1-P	Field mustard	nucleus	25.64	22.16
Bra007814.1-P	Field mustard	nucleus	27.07	20.81
Bra037208.1-P	Field mustard	nucleus	32.32	20.11
Bra014632.1-P	Field mustard	cytosol	23.93	16.58
Bra007318.1-P	Field mustard	nucleus	22.78	15.98
Bra034727.1-P	Field mustard	nucleus	26.98	14.02
Bra000409.1-P	Field mustard	plastid	26.6	12.9
Bra039296.1-P	Field mustard	plastid	26.12	12.82
Bra027574.1-P	Field mustard	nucleus	26.88	12.69
Bra000114.1-P	Field mustard	nucleus	27.45	8.79

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.1040.30	Gene3D:1.20.5.1190	MapMan:12.4.1.1.4	Gene3D:3.40.50.10810	Gene3D:3.40.50.300
EnsemblPlantsGene:Bra040221	EnsemblPlants:Bra040221.1	EnsemblPlants:Bra040221.1-P	ncoils:Coil	InterPro:DBINO	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682	GO:GO:0003824	GO:GO:0004386
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0006338	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016569	GO:GO:0016589	GO:GO:0016787	GO:GO:0016818	GO:GO:0016887	GO:GO:0031491
GO:GO:0043044	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:Homeobox-like_sf	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR017884	InterPro:IPR020838	InterPro:IPR036306	InterPro:IPR038718	InterPro:ISWI	InterPro:ISWI_HAND-dom
InterPro:ISWI_HAND-dom_sf	UniProt:M4FGJ3	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFAM:PF09110
PFAM:PF09111	PFAM:PF13892	PFscan:PS51192	PFscan:PS51194	PFscan:PS51293	PANTHER:PTHR10799
PANTHER:PTHR10799:SF887	InterPro:SANT/Myb	InterPro:SANT_dom	InterPro:SLIDE	SMART:SM00487	SMART:SM00490
SMART:SM00717	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF101224	SUPFAM:SSF46689	SUPFAM:SSF52540
UniParc:UPI0002544B15	SEG:seg	:	:	:	:

Description

AT3G06400 (E=0.0) CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding

Coordinates

chrA01:-:28182463..28187663

Molecular Weight (calculated)

121917.0 Da

IEP (calculated)

5.561

GRAVY (calculated)

-0.816

Length

1049 amino acids

Sequence
(BLAST)

0001: MAKFSNRDDA LSSEEEEEEN VNTNIGEEDE EELEAVTRSS DSDEEAAPVS DEEIAPIEDD YEDEEDDEKV EISKREKARL RDMQKLKKQK IQEMLDSQNA
0101: SIDADMNNKG KGRLKYLLQQ TELFSHFAKG DPSSSQKKAK GRGRHASKVT EEEEDEEYLK EEEDGLAASG NTRLLTQPSC IQGKLRDYQL AGLNWLIRLY
0201: ENGINGILAD EMGLGKTLQT ISLLAYLHEY RGINGPHMVV APKSTLGNWM NEIRRFCPVL RAVKFLGNPE ERRHIRDDLL VAGKFDICVT SFEMAIKEKT
0301: ALRRFSWRYI IIDEAHRIKN ENSLLSKTMR IFSTNYRLLI TGTPLQNNLH ELWALLNFLL PEIFSSAETF DEWFQISGEN DQQEVVQQLH KVLRPFLLRR
0401: LKSDVEKGLP PKKETILKVG MSQMQKQYYK ALLQKDLEAV NAGGERKRLL NIAMQLRKCC NHPYLFQGAE PGPPYTTGDH LITNAGKMVL LDKLLPKLKE
0501: RDSRVLIFSQ MTRLLDILED YLMYRGYLYC RIDGNTGGDE RDASIEAYNK PGSEKFVFLL STRAGGLGIN LATADVVILY DSDWNPQVDL QAQDRAHRIG
0601: QKKEVQVFRF CTESAIEEKV IERAYKKLAL DALVIQQGRL AEQKTVNKDE LLQMVRYGAE MVFSSKDSTI TDEDIDRIIA KGEEATAELD AKMKKFTEDA
0701: IQFKMDDSAD FYDFDDDNKD ENKLDFKKIV SDNWNDPPKR ERKRNYSESE YFKQTLRQGA PAKPKEPRIP RMPQLHDFQF FNTQRLTELY EKEVRYLMQT
0801: HQKNQLKDTV DVEEPEGGDP LTAEEVEEKE SLLEEGFSTW SRRDFNSFLR ACEKYGRNDI KSIASEMEGK TEEEVERYAQ VFKERYKELN DYDRILKNIE
0901: RGEARISRKD EIMKAIGKKL DRYRNPWLEL KIQYGQNKGK LYNEECDRFM ICMVNKLGYG NWDELKAAFR TSPLFRFDWF VKSRTSQELA RRCDTLIRLI
1001: EKENQELDER ERQARKEKKL AKSATPSKRP LGRQQSESPS SLKKRKHLR

Best Arabidopsis Sequence Match ( AT3G06400.1 )
(BLAST)

0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR

Arabidopsis Description

CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.