Factsheet for Bra020751.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24695	Canola	nucleus	99.72	99.72
Bra040221.1-P	Field mustard	nucleus	94.59	94.95
AT3G06400.3	Thale cress	nucleus	93.54	93.19
CDY05261	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	99.24	92.23
Bra002173.1-P	Field mustard	nucleus	87.27	86.37
KRH21031	Soybean	nucleus	86.13	85.0
KRH11241	Soybean	nucleus	86.42	84.89
KRH50913	Soybean	nucleus	84.9	84.5
KRH02212	Soybean	nucleus	84.33	83.85
VIT_05s0020g01780.t01	Wine grape	nucleus	85.66	83.52
PGSC0003DMT400058376	Potato	nucleus	83.86	82.99
Solyc01g067390.2.1	Tomato	nucleus	83.86	82.91
PGSC0003DMT400079102	Potato	nucleus	82.91	82.51
Solyc06g054560.2.1	Tomato	nucleus	83.0	82.38
GSMUA_Achr8P09960_001	Banana	nucleus	83.29	81.13
Bra023689.1-P	Field mustard	nucleus	83.67	80.02
GSMUA_Achr3P23910_001	Banana	nucleus	80.53	79.33
KXG32501	Sorghum	nucleus	81.58	77.6
Os01t0367900-01	Rice	nucleus	81.58	77.6
TraesCS1D01G099600.1	Wheat	nucleus	81.01	77.06
TraesCS1B01G118900.2	Wheat	nucleus	80.91	77.03
TraesCS1A01G091100.1	Wheat	nucleus	80.63	76.76
Zm00001d040831_P021	Maize	nucleus	81.29	76.43
Zm00001d009312_P028	Maize	nucleus	81.77	76.19
Os05t0150300-01	Rice	nucleus	81.48	74.09
TraesCS3D01G068900.1	Wheat	nucleus	77.59	72.88
TraesCS3B01G083400.1	Wheat	nucleus	78.16	72.58
TraesCS3A01G069900.2	Wheat	nucleus	77.59	72.3
HORVU1Hr1G021540.17	Barley	plasma membrane	80.72	71.97
HORVU3Hr1G012850.1	Barley	nucleus	76.64	71.23
Bra012099.1-P	Field mustard	cytosol	25.55	34.89
Bra040237.1-P	Field mustard	nucleus	27.45	26.27
Bra017422.1-P	Field mustard	cytosol	18.8	25.98
Bra004881.1-P	Field mustard	nucleus	13.68	22.26
Bra011311.1-P	Field mustard	nucleus	25.26	21.91
Bra037150.1-P	Field mustard	nucleus	24.88	21.85
Bra007814.1-P	Field mustard	nucleus	26.59	20.51
Bra037208.1-P	Field mustard	nucleus	32.1	20.05
Bra014632.1-P	Field mustard	cytosol	23.27	16.18
Bra007318.1-P	Field mustard	nucleus	22.32	15.71
Bra034727.1-P	Field mustard	nucleus	26.97	14.07
Bra000409.1-P	Field mustard	plastid	26.5	12.9
Bra027574.1-P	Field mustard	nucleus	26.88	12.74
Bra039296.1-P	Field mustard	plastid	25.83	12.73
Bra000114.1-P	Field mustard	nucleus	26.97	8.67

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.1040.30	Gene3D:1.20.5.1190	MapMan:12.4.1.1.4	Gene3D:3.40.50.10810	Gene3D:3.40.50.300
EnsemblPlantsGene:Bra020751	EnsemblPlants:Bra020751.1	EnsemblPlants:Bra020751.1-P	ncoils:Coil	InterPro:DBINO	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682	GO:GO:0003824	GO:GO:0004386
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0006338	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016569	GO:GO:0016589	GO:GO:0016787	GO:GO:0016818	GO:GO:0016887	GO:GO:0031491
GO:GO:0043044	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:Homeobox-like_sf	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR017884	InterPro:IPR020838	InterPro:IPR036306	InterPro:IPR038718	InterPro:ISWI	InterPro:ISWI_HAND-dom
InterPro:ISWI_HAND-dom_sf	UniProt:M4DW57	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFAM:PF09110
PFAM:PF09111	PFAM:PF13892	PFscan:PS51192	PFscan:PS51194	PFscan:PS51293	PANTHER:PTHR10799
PANTHER:PTHR10799:SF887	InterPro:SANT/Myb	InterPro:SANT_dom	InterPro:SLIDE	SMART:SM00487	SMART:SM00490
SMART:SM00717	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF101224	SUPFAM:SSF46689	SUPFAM:SSF52540
UniParc:UPI0002545F68	SEG:seg	:	:	:	:

Description

AT3G06400 (E=0.0) CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding

Coordinates

chrA02:+:23292531..23297898

Molecular Weight (calculated)

122290.0 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.818

Length

1053 amino acids

Sequence
(BLAST)

0001: MAKFSNRDDA YSSEEDEEHV ENNAGEEEDE EELEAVARSS DSDEEAVPEE SPVSDEDIAP IEDDYEDEED DEKVEIGKRE KARLREMQKV KKQKLQEMLE
0101: SQNASIDADM NNKGKGRLKF LLQQTELFAH FAKGDASSSS QKKVKGRGRH ASKVTEEEED EEYLKEEEGG SAASGNTRLL TQPSCIQGKM RDYQLAGLNW
0201: LIRLYENGIN GILADEMGLG KTLQTISLLA YLHEYRGISG PHMVVAPKST LGNWMNEIRR FCPVLRAVKF LGNPEERRHI REDLLVAGKF DVCVTSFEMA
0301: IKEKTALRRF SWRYIIIDEA HRIKNENSLL SKTMRLFSTN YRLLITGTPL QNNLHELWAL LNFLLPEVFS SAETFDEWFQ ISGENDQQEV VQQLHKVLRP
0401: FLLRRLKSDV EKGLPPKKET ILKVGMSQMQ KQYYKALLQK DLEALNAGGE RKRLLNIAMQ LRKCCNHPYL FQGAEPGPPY TTGDHLITNA GKMVLLDKLL
0501: PKLKERDSRV LIFSQMTRLL DILEDYLMYR GYLYCRIDGN TGGDDRDASI EAYNKPGSEK FVFLLSTRAG WLGINLATAD VVILYDSDWN PQVDLQAQDR
0601: AHRIGQKKEV QVFRFCTESA IEEKVIERAY KKLALDALVI QQGRLAEQKT VNKDELLQMV RYGAEMVFSS KDSTITDEDI DRIIAKGEEA TAELDAKMKK
0701: FTEDAIQFKM DDSADFYDFD DDNKDENKLD FKKIVGDNWN DPPKRERKRN YSEAEYYKQT LRQGAPSKPK EPRIPRMPQL HDFQFFNIQR LTELYEKEVR
0801: YLMQTHQKNQ LKDTVEEEEP EGGDPLTAEE VEEKEALLEE GFSTWNKRDF NSFLRACEKY GRNDITSIAS EMEGKTEEEV ERYAQVFRER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA LGKKLDRYRN PWLEMKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAYRTSPLF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ ELDERERQAR KEKKLAKSAT PSKRPLGGPS ESPSSLKKRK HLR

Best Arabidopsis Sequence Match ( AT3G06400.1 )
(BLAST)

0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR

Arabidopsis Description

CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.