Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30994 | Canola | nucleus | 37.58 | 88.91 |
| Bra007318.1-P | Field mustard | nucleus | 86.0 | 87.03 |
| CDX88940 | Canola | nucleus | 94.72 | 86.7 |
| AT3G57300.2 | Thale cress | cytosol | 82.96 | 81.56 |
| KRH33202 | Soybean | nucleus | 63.67 | 66.07 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 67.7 | 65.83 |
| KRH66858 | Soybean | nucleus | 66.31 | 65.54 |
| KRG95191 | Soybean | nucleus | 66.25 | 65.51 |
| Solyc04g016370.2.1 | Tomato | nucleus | 64.13 | 63.09 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 58.45 | 60.53 |
| OQU92590 | Sorghum | nucleus | 54.1 | 58.29 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 55.75 | 56.49 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 55.81 | 56.48 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 55.48 | 56.15 |
| Zm00001d029180_P002 | Maize | nucleus | 55.94 | 55.54 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 55.48 | 55.23 |
| Zm00001d047471_P002 | Maize | nucleus | 55.09 | 53.22 |
| Bra012099.1-P | Field mustard | cytosol | 15.32 | 30.09 |
| Bra017422.1-P | Field mustard | cytosol | 14.13 | 28.08 |
| Bra040221.1-P | Field mustard | nucleus | 16.58 | 23.93 |
| Bra020751.1-P | Field mustard | nucleus | 16.18 | 23.27 |
| Bra040237.1-P | Field mustard | nucleus | 16.84 | 23.18 |
| Bra002173.1-P | Field mustard | nucleus | 16.25 | 23.12 |
| Bra023689.1-P | Field mustard | nucleus | 15.85 | 21.8 |
| Bra004881.1-P | Field mustard | nucleus | 8.72 | 20.4 |
| Bra037150.1-P | Field mustard | nucleus | 15.06 | 19.02 |
| Bra011311.1-P | Field mustard | nucleus | 14.99 | 18.7 |
| Bra007814.1-P | Field mustard | nucleus | 15.39 | 17.07 |
| Bra034727.1-P | Field mustard | nucleus | 20.87 | 15.65 |
| Bra037208.1-P | Field mustard | nucleus | 15.92 | 14.29 |
| Bra039296.1-P | Field mustard | plastid | 18.49 | 13.1 |
| Bra000409.1-P | Field mustard | plastid | 18.36 | 12.86 |
| Bra027574.1-P | Field mustard | nucleus | 16.05 | 10.94 |
| Bra000114.1-P | Field mustard | nucleus | 16.91 | 7.82 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EnsemblPlantsGene:Bra014632 | EnsemblPlants:Bra014632.1 | EnsemblPlants:Bra014632.1-P |
| ncoils:Coil | InterPro:DBINO | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | UniProt:M4DDR4 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | UniParc:UPI000254458D | SEG:seg | : | : | : |
Description
AT3G57300 (E=0.0) INO80, ATINO80 | INO80 (INO80 ORTHOLOG); ATP binding / DNA binding / helicase/ nucleic acid binding
Coordinates
chrA04:-:1878579..1885521
Molecular Weight (calculated)
172925.0 Da
IEP (calculated)
9.484
GRAVY (calculated)
-0.588
Length
1514 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRSRRQPSS DSRYATLFNL EPLRNFTIPR HEDEIENYDE TRSNQVANYG NGVKKRKRWI EEAGDDDDDH YNQHVTEEHY RSMLEEHVQR LKSSSRESQG
0101: NHTSLMRKSN VGSYRGNGQR GRFYDADAIS QRRGSYRGSA ITPKIAYEPS YLDIGNGVVY KIPPSYDKLV ASLNLPSFSD LRVEDFYLRG ALDLRSLEEV
0201: MASVKRSGVR SRNGMGEPRP QYESLQARVK ALSASNSNPN FSLKVSDDAM NSVIPEGAAG STARTILSEG GVLQVHYVKV LEKGDTYEIV ERSLPKKLKV
0301: KNDPAVIEKT ERDKIRKVWI NIVRRDIPKH HRVFTNFYRK QSIDAKRFAD GCQREVRYKV ARSYKLPRSA PIRTRKISRD MLLFWKRFDK QMAEERKKQE
0401: KEAAEALKRE QELREAQRQQ QRLNFLIKQT ELYSHFMQNK TDSKPSESLS IADENLVDEK LREPAAAEPS EVEDPEEAKM KADALKATQE AVSKQKKITD
0501: AFDTESMKLR QTSDMDGPPN DFSVSGSGNI DLHNPSTMPA TSTVQTPELF KGTLKEYQMK GLQWLVNCYE QGLNGILADE MGLGKTIQAM AFLAHLAEEK
0601: NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RTILRKNINP KRMYRRDAGF HILITSYQLL VTDEKYFRRV KWQYMVLDEA QAIKNSTSIR
0701: WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPMLFD SHEQFNEWFS RGIENHAEHG GTLNEHQLNR LHAILKPFML RRLKKDVVSE LTTKTEVTVH
0801: CKLSSRQQAF YQAIKNKISL AELFDSNRGH FNDKKLLNLM NIVIQLRKAS SLVKPALLVL LSHTYARLWL MVIYLCLPCQ VCNHPELFER NEGSSYLYFG
0901: VMSNSLLPPP FGELEDVHYS GGKNPITYKI PKLLQKEMLQ SSETFCSSIR RGLSRESFLK HFNIYSPESI FRSIFSSESS VDQAVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SAMERLLFSI LKWERQFLDE ILDSVMEFVD DDLSGGNITR GKTRAVTRML LMPSKLETSL LKGKRGTRPT CHSFESLVVS HQDRLLSNIK
1101: LLHSTYTFIP KARAPPVSVH CSDRNFAYGT TEEMHQPWLK RLLIGFARTS EANGPRKPNN LPHPLIQEID SELPVVQPAL QLTHRVFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQQ RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNHTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDVFGTADV VSLLMDDADA AQLEQKFREL PLQVRDRQKK
1401: KQPVKCIRID AEGDAALEEL EDAAERRDKE QEPSQEPEKT KPSNKKRKAA ASTPKPRVPP KANEEGDAPL QPQRTKRVKR QTKSVNESLE PVFSASVTAA
1501: NGEVNPSSSN PDAN
0101: NHTSLMRKSN VGSYRGNGQR GRFYDADAIS QRRGSYRGSA ITPKIAYEPS YLDIGNGVVY KIPPSYDKLV ASLNLPSFSD LRVEDFYLRG ALDLRSLEEV
0201: MASVKRSGVR SRNGMGEPRP QYESLQARVK ALSASNSNPN FSLKVSDDAM NSVIPEGAAG STARTILSEG GVLQVHYVKV LEKGDTYEIV ERSLPKKLKV
0301: KNDPAVIEKT ERDKIRKVWI NIVRRDIPKH HRVFTNFYRK QSIDAKRFAD GCQREVRYKV ARSYKLPRSA PIRTRKISRD MLLFWKRFDK QMAEERKKQE
0401: KEAAEALKRE QELREAQRQQ QRLNFLIKQT ELYSHFMQNK TDSKPSESLS IADENLVDEK LREPAAAEPS EVEDPEEAKM KADALKATQE AVSKQKKITD
0501: AFDTESMKLR QTSDMDGPPN DFSVSGSGNI DLHNPSTMPA TSTVQTPELF KGTLKEYQMK GLQWLVNCYE QGLNGILADE MGLGKTIQAM AFLAHLAEEK
0601: NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RTILRKNINP KRMYRRDAGF HILITSYQLL VTDEKYFRRV KWQYMVLDEA QAIKNSTSIR
0701: WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPMLFD SHEQFNEWFS RGIENHAEHG GTLNEHQLNR LHAILKPFML RRLKKDVVSE LTTKTEVTVH
0801: CKLSSRQQAF YQAIKNKISL AELFDSNRGH FNDKKLLNLM NIVIQLRKAS SLVKPALLVL LSHTYARLWL MVIYLCLPCQ VCNHPELFER NEGSSYLYFG
0901: VMSNSLLPPP FGELEDVHYS GGKNPITYKI PKLLQKEMLQ SSETFCSSIR RGLSRESFLK HFNIYSPESI FRSIFSSESS VDQAVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SAMERLLFSI LKWERQFLDE ILDSVMEFVD DDLSGGNITR GKTRAVTRML LMPSKLETSL LKGKRGTRPT CHSFESLVVS HQDRLLSNIK
1101: LLHSTYTFIP KARAPPVSVH CSDRNFAYGT TEEMHQPWLK RLLIGFARTS EANGPRKPNN LPHPLIQEID SELPVVQPAL QLTHRVFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQQ RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNHTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDVFGTADV VSLLMDDADA AQLEQKFREL PLQVRDRQKK
1401: KQPVKCIRID AEGDAALEEL EDAAERRDKE QEPSQEPEKT KPSNKKRKAA ASTPKPRVPP KANEEGDAPL QPQRTKRVKR QTKSVNESLE PVFSASVTAA
1501: NGEVNPSSSN PDAN
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.