Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 68.4 | 64.23 |
| KRH33202 | Soybean | nucleus | 61.56 | 61.69 |
| OQU92590 | Sorghum | nucleus | 59.23 | 61.64 |
| Solyc04g016370.2.1 | Tomato | nucleus | 64.43 | 61.21 |
| KRH66858 | Soybean | nucleus | 63.89 | 60.97 |
| KRG95191 | Soybean | nucleus | 63.75 | 60.88 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 62.18 | 60.76 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 62.04 | 60.71 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 61.97 | 60.56 |
| CDX72050 | Canola | cytosol | 59.85 | 59.4 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 61.7 | 59.3 |
| Bra007318.1-P | Field mustard | nucleus | 60.05 | 58.69 |
| Bra014632.1-P | Field mustard | cytosol | 60.53 | 58.45 |
| Zm00001d029180_P002 | Maize | nucleus | 60.67 | 58.16 |
| AT3G57300.2 | Thale cress | cytosol | 61.22 | 58.12 |
| Zm00001d047471_P002 | Maize | nucleus | 60.53 | 56.48 |
| CDY30994 | Canola | nucleus | 23.73 | 54.22 |
| CDX88940 | Canola | nucleus | 60.6 | 53.57 |
| CDY06115 | Canola | nucleus | 60.12 | 46.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.31 | 37.11 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 15.6 | 30.04 |
| GSMUA_Achr4P25930_001 | Banana | cytosol | 14.23 | 25.77 |
| GSMUA_Achr3P23910_001 | Banana | nucleus | 16.83 | 23.01 |
| GSMUA_Achr8P09960_001 | Banana | nucleus | 16.96 | 22.94 |
| GSMUA_Achr6P02430_001 | Banana | cytosol | 11.49 | 18.6 |
| GSMUA_Achr6P20210_001 | Banana | nucleus | 17.17 | 17.12 |
| GSMUA_Achr4P21270_001 | Banana | cytosol | 16.14 | 17.11 |
| GSMUA_Achr8P06840_001 | Banana | nucleus | 16.01 | 16.96 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 17.85 | 15.54 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus | 3.15 | 13.86 |
| GSMUA_Achr3P26510_001 | Banana | nucleus | 13.95 | 12.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.13 | 12.35 |
| GSMUA_Achr1P24350_001 | Banana | nucleus | 17.78 | 12.2 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 18.26 | 11.98 |
| GSMUA_Achr9P11210_001 | Banana | nucleus | 15.12 | 10.74 |
| GSMUA_Achr6P29570_001 | Banana | nucleus | 15.53 | 10.6 |
Protein Annotations
Description
DNA helicase INO80 complex homolog 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G00120_001]
Coordinates
chr8:-:90683..105370
Molecular Weight (calculated)
168309.0 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.642
Length
1462 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPRRHHSKN GLSYSNLFNL EPLMSFQVPQ PDDEFHNYED SSQDENRSSQ GQGVLFERCN GEISPELIRR RRRHGVESEA VANSSLRNDT DSNDEVDEEY
0101: ENGISEEQYR AMLSDHVQKY RKVKSKESLS GLASSRIAMS GTKRSHGSKT RKFTGEPLVS AKGETTSRKM EISPGYYEAD LDVDYDGGNR YTLSMDSTYL
0201: DIGEGITYQI PPTYDKLVAS LNLPSIADII VEENFLNGSL DLRSLAAMIA TDRRFDTLNQ GGLNEPQPQY ESLQARLKAL SFGNSDKKFT LQVCDIGLDP
0301: FSIPEGAAGR IRRLIMSDSG TLQVYYVKVL EKGDTYEIIE RSLPKKQIVK KDPSEIEKEE IEKIGKVWFN IVRRDIPKHH KIFTNFHKKQ LTDAKRFSET
0401: CQREVKLKVS RSLRLMRSAA VRTRRLARDM LIFWKKVDKE QAELRKKEER DAAEALKREE ELREAKRQQQ RLNFLISQTE LYSHFMGNKS SAQPDPEEVE
0501: LKKEAHRAAK QAVSQQKKIT NEFDYACLKL RQVAETKDQG NDSAGGSTMP VTSTVQTPEM FKGHLKEYQL KGLQWLVNCY EQGLNGILAD EMGLGKTIQA
0601: MAFLAHLAEE KNIWGPFLVV APSSVLNNWA DEVSRFCPDF RTLPYWGGLN ERTVLRKNIN AKRLYKRDAR FHILITSYQL IVTDEKYLRR LKWQYMVLDE
0701: AQAIKSSSSI RWKTLLSFNC RNRLLLTGTP IQNNMAELWA LLHFIMPTLF DSHEQFDEWF SKGIESHAEH GGTLNEHQLN RLHAVLKPFM LRRVKKDVIS
0801: EMTGKTEITV HCNLSSRQQA FYRAIKNKIS LAELFDGSRG HMNEKKIVNL MNIVIQLRKV CNHPELFERN EGSSYFYFAE IPNSLLPSPL EGVDVNYAGN
0901: RNPITYKVPK LIHQEIIRST EVPFSIPRRG VHCEYFERLF DIFSPGNIYE SELPKYKCLV NSSERLFFSL LRTIARMLLL PTRSEASLLR RRLATGLGDA
1001: PYEALVTSHN DRYTSNIRLL RAMYAFIPRA RAPPIHAQCP DRSFAYQINE ELHHPWMKKL FLGFARTSEF NGPRRPMHHH HLIEEISQSY AIEPIFQLPY
1101: RIFGSSPPMQ SFDPAKMLTD SGKLKTLDIL LKRLRAENHR VLLFAQMTKM LNILEDYMNY RKYKYFRLDG SSTIMDRRDM VRDFQRRNDI FVFLLSTRAG
1201: GLGINLTAAD TVIFYESDWN PTLDLQAMDR AHRLGQTKEV TVYRLICKET VEEKILQRAS QKNTVQQLVM TGGHVQGDLL KPEDVVSLLL DDAQLEQKLR
1301: EIPVQQPKDR QKKKRLKGIR VDEEGDVSLE DFTNSGSAEN ELEKENAHRK KRKAKSQKDN PLQLQNPQRT AEDMDLLLET DEPSPSGYEE DHIVQERSKR
1401: LRRPTKSINE NLEPAFNSAD NVPIMNSSED QPTSYDYKSG VYGSGSQDAL PSQAPYGPNV ET
0101: ENGISEEQYR AMLSDHVQKY RKVKSKESLS GLASSRIAMS GTKRSHGSKT RKFTGEPLVS AKGETTSRKM EISPGYYEAD LDVDYDGGNR YTLSMDSTYL
0201: DIGEGITYQI PPTYDKLVAS LNLPSIADII VEENFLNGSL DLRSLAAMIA TDRRFDTLNQ GGLNEPQPQY ESLQARLKAL SFGNSDKKFT LQVCDIGLDP
0301: FSIPEGAAGR IRRLIMSDSG TLQVYYVKVL EKGDTYEIIE RSLPKKQIVK KDPSEIEKEE IEKIGKVWFN IVRRDIPKHH KIFTNFHKKQ LTDAKRFSET
0401: CQREVKLKVS RSLRLMRSAA VRTRRLARDM LIFWKKVDKE QAELRKKEER DAAEALKREE ELREAKRQQQ RLNFLISQTE LYSHFMGNKS SAQPDPEEVE
0501: LKKEAHRAAK QAVSQQKKIT NEFDYACLKL RQVAETKDQG NDSAGGSTMP VTSTVQTPEM FKGHLKEYQL KGLQWLVNCY EQGLNGILAD EMGLGKTIQA
0601: MAFLAHLAEE KNIWGPFLVV APSSVLNNWA DEVSRFCPDF RTLPYWGGLN ERTVLRKNIN AKRLYKRDAR FHILITSYQL IVTDEKYLRR LKWQYMVLDE
0701: AQAIKSSSSI RWKTLLSFNC RNRLLLTGTP IQNNMAELWA LLHFIMPTLF DSHEQFDEWF SKGIESHAEH GGTLNEHQLN RLHAVLKPFM LRRVKKDVIS
0801: EMTGKTEITV HCNLSSRQQA FYRAIKNKIS LAELFDGSRG HMNEKKIVNL MNIVIQLRKV CNHPELFERN EGSSYFYFAE IPNSLLPSPL EGVDVNYAGN
0901: RNPITYKVPK LIHQEIIRST EVPFSIPRRG VHCEYFERLF DIFSPGNIYE SELPKYKCLV NSSERLFFSL LRTIARMLLL PTRSEASLLR RRLATGLGDA
1001: PYEALVTSHN DRYTSNIRLL RAMYAFIPRA RAPPIHAQCP DRSFAYQINE ELHHPWMKKL FLGFARTSEF NGPRRPMHHH HLIEEISQSY AIEPIFQLPY
1101: RIFGSSPPMQ SFDPAKMLTD SGKLKTLDIL LKRLRAENHR VLLFAQMTKM LNILEDYMNY RKYKYFRLDG SSTIMDRRDM VRDFQRRNDI FVFLLSTRAG
1201: GLGINLTAAD TVIFYESDWN PTLDLQAMDR AHRLGQTKEV TVYRLICKET VEEKILQRAS QKNTVQQLVM TGGHVQGDLL KPEDVVSLLL DDAQLEQKLR
1301: EIPVQQPKDR QKKKRLKGIR VDEEGDVSLE DFTNSGSAEN ELEKENAHRK KRKAKSQKDN PLQLQNPQRT AEDMDLLLET DEPSPSGYEE DHIVQERSKR
1401: LRRPTKSINE NLEPAFNSAD NVPIMNSSED QPTSYDYKSG VYGSGSQDAL PSQAPYGPNV ET
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.