Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029180_P002 | Maize | nucleus | 94.02 | 86.62 |
| Zm00001d047471_P002 | Maize | nucleus | 92.38 | 82.83 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 82.42 | 77.41 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 82.14 | 77.24 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 82.06 | 77.07 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 81.99 | 75.74 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 61.64 | 59.23 |
| KRH33202 | Soybean | nucleus | 59.57 | 57.37 |
| Solyc04g016370.2.1 | Tomato | nucleus | 61.49 | 56.14 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 62.14 | 56.07 |
| KRH66858 | Soybean | nucleus | 60.57 | 55.55 |
| KRG95191 | Soybean | nucleus | 60.14 | 55.19 |
| CDX72050 | Canola | cytosol | 57.22 | 54.58 |
| Bra014632.1-P | Field mustard | cytosol | 58.29 | 54.1 |
| Bra007318.1-P | Field mustard | nucleus | 57.44 | 53.94 |
| CDY30994 | Canola | nucleus | 24.27 | 53.28 |
| AT3G57300.2 | Thale cress | cytosol | 58.22 | 53.12 |
| CDX88940 | Canola | nucleus | 58.43 | 49.64 |
| CDY06115 | Canola | nucleus | 57.65 | 43.02 |
| EER97913 | Sorghum | cytosol | 15.59 | 28.15 |
| EER93549 | Sorghum | cytosol | 15.23 | 25.6 |
| OQU93492 | Sorghum | cytosol | 15.16 | 23.48 |
| KXG32501 | Sorghum | nucleus | 17.79 | 22.58 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.01 | 22.45 |
| KXG26914 | Sorghum | nucleus | 15.09 | 21.83 |
| KXG33813 | Sorghum | nucleus | 16.37 | 19.97 |
| KXG19483 | Sorghum | cytosol | 16.58 | 17.6 |
| OQU85588 | Sorghum | nucleus | 22.35 | 15.49 |
| KXG36860 | Sorghum | nucleus | 17.58 | 14.3 |
| OQU84199 | Sorghum | nucleus | 19.07 | 12.64 |
| KXG36264 | Sorghum | nucleus | 17.37 | 10.97 |
| OQU76185 | Sorghum | nucleus | 18.72 | 6.5 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr1:-:65922965..65933585
Molecular Weight (calculated)
160182.0 Da
IEP (calculated)
8.388
GRAVY (calculated)
-0.563
Length
1405 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSEHVQKYR RSKFKEGAFS SDPPRVATPQ IKHKNGGKKT IKHASDFRDV AALDGIEASH EYNGIECVKT HGGFNKLVAS LDSTYLDMGD NIRYLVPEGY
0101: DKLASSLNLP VSSDIRVEEH FLKGMLDLRT LAAMLGTDQK FEASNRGGLS EPLPQFESLK ERVKVQKFSL QVTEDPFAIP EGAAGRIRRS IISEAGNLQV
0201: HYVKVLEKGD TYEIIERSLP KKQIVKKEPS VIVKEESEKT YKLWQSLATK SIPKHHRNFT ALMKKRQVDA KRFSDSCQRE VKLKVSRSLK LMRCAAIRTR
0301: KLARDMLIFW KRVDKEQYEL RKKEEREAAE ALKREEELRE AKRQQQRLNF LLSQTELYSH FMQNKAGGSA PPDEVDVPDE DEEEDPEEAQ LKREALRAAQ
0401: HAVSQQKMKT NAFDSEIVRL RQTSESVLPT DDPSSMDPSK IDLLHPSTMP EKSSVQTPEL FKGVLKEYQL KGLQWLVNCY EQGLNGILAD EMGLGKTVQA
0501: MAFLSHLAED KNIWGPFLVV APASVVNNWA EELIRFCPDL KILPYWGPER MILRKNINPK RLYRRDASFH ILITNYQILV NEEKLLRRVK WQYMVLDEAQ
0601: AIKSSSSQRW KTLLSFNCRN RLLLTGTPIQ NNMAELWALL HFIMPTLFDS HEQFNEWFSK GIEGHAEHGG ALNEHQLSRL HAILKPFMLR RVKIDVIAEM
0701: TKKKEEIVPC KLSSRQQVFY QAIKNKISLN ELLDGSRGHL NDKKLLSLMN IVMQLRKVCN HPELFERNEG SSYFYFADIP NSLLSPPFGE LQDVHYAGKR
0801: NPIIFEIPKL VYEGIICNTE NSGNICGFQN GYLNRLFNIF LPSNIHRSAI PEVNSSNESV LSSGAFGFTR LSNLCPVEAS FLATASLFER LAFSVMQWNR
0901: NCTDEIMDAF LDSEDPDIQS SQNDSTTVRA VARLLLSSTK AKPSLLRTKI GTGPSDGPYE ALVLSHRDRL ASNIRLLRSA YAFIPPARAP PINVWCADRS
1001: FAYKFTDEMH DPWAKKLFLG FARTSEFNGP RQPIAPHPLI QELNTDLPIL EPMLQLPYRI FGSSPPMSNF DPAKMLTDSG KLHTLDMLLR RLRSEGHRVL
1101: LFAQMTKMLD ILEDYMNFRK FKYFRLDGSS AISDRRDMVR DFQNRNDVFV FLLSTRAGGL GINLTAADTV IFYEIDWNPT QDQQAMDRTH RLGQTKEVTV
1201: YRLICKDTIE EKILQRAKQK NAVQELVMKG KHVQDDHLMR QEDVVSLLID DTQIAHKLKE ISMQAKDRQK KRRAKGIKVD KEGDLTLEDL DDATATATAD
1301: ADQDKTTSKK KKSSHKKHTN THDNDNTDKN GEPDAGGDQL GSSHTENEQI AEPRPKRSKR LMKSITDDKE LAAAAVVPEE PANEAENHRT HDYDGTEEVQ
1401: DGTPA
0101: DKLASSLNLP VSSDIRVEEH FLKGMLDLRT LAAMLGTDQK FEASNRGGLS EPLPQFESLK ERVKVQKFSL QVTEDPFAIP EGAAGRIRRS IISEAGNLQV
0201: HYVKVLEKGD TYEIIERSLP KKQIVKKEPS VIVKEESEKT YKLWQSLATK SIPKHHRNFT ALMKKRQVDA KRFSDSCQRE VKLKVSRSLK LMRCAAIRTR
0301: KLARDMLIFW KRVDKEQYEL RKKEEREAAE ALKREEELRE AKRQQQRLNF LLSQTELYSH FMQNKAGGSA PPDEVDVPDE DEEEDPEEAQ LKREALRAAQ
0401: HAVSQQKMKT NAFDSEIVRL RQTSESVLPT DDPSSMDPSK IDLLHPSTMP EKSSVQTPEL FKGVLKEYQL KGLQWLVNCY EQGLNGILAD EMGLGKTVQA
0501: MAFLSHLAED KNIWGPFLVV APASVVNNWA EELIRFCPDL KILPYWGPER MILRKNINPK RLYRRDASFH ILITNYQILV NEEKLLRRVK WQYMVLDEAQ
0601: AIKSSSSQRW KTLLSFNCRN RLLLTGTPIQ NNMAELWALL HFIMPTLFDS HEQFNEWFSK GIEGHAEHGG ALNEHQLSRL HAILKPFMLR RVKIDVIAEM
0701: TKKKEEIVPC KLSSRQQVFY QAIKNKISLN ELLDGSRGHL NDKKLLSLMN IVMQLRKVCN HPELFERNEG SSYFYFADIP NSLLSPPFGE LQDVHYAGKR
0801: NPIIFEIPKL VYEGIICNTE NSGNICGFQN GYLNRLFNIF LPSNIHRSAI PEVNSSNESV LSSGAFGFTR LSNLCPVEAS FLATASLFER LAFSVMQWNR
0901: NCTDEIMDAF LDSEDPDIQS SQNDSTTVRA VARLLLSSTK AKPSLLRTKI GTGPSDGPYE ALVLSHRDRL ASNIRLLRSA YAFIPPARAP PINVWCADRS
1001: FAYKFTDEMH DPWAKKLFLG FARTSEFNGP RQPIAPHPLI QELNTDLPIL EPMLQLPYRI FGSSPPMSNF DPAKMLTDSG KLHTLDMLLR RLRSEGHRVL
1101: LFAQMTKMLD ILEDYMNFRK FKYFRLDGSS AISDRRDMVR DFQNRNDVFV FLLSTRAGGL GINLTAADTV IFYEIDWNPT QDQQAMDRTH RLGQTKEVTV
1201: YRLICKDTIE EKILQRAKQK NAVQELVMKG KHVQDDHLMR QEDVVSLLID DTQIAHKLKE ISMQAKDRQK KRRAKGIKVD KEGDLTLEDL DDATATATAD
1301: ADQDKTTSKK KKSSHKKHTN THDNDNTDKN GEPDAGGDQL GSSHTENEQI AEPRPKRSKR LMKSITDDKE LAAAAVVPEE PANEAENHRT HDYDGTEEVQ
1401: DGTPA
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.