Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G159900.1 | Wheat | nucleus | 98.33 | 98.46 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 98.33 | 98.33 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 96.66 | 95.07 |
| OQU92590 | Sorghum | nucleus | 77.41 | 82.42 |
| Zm00001d029180_P002 | Maize | nucleus | 80.88 | 79.34 |
| Zm00001d047471_P002 | Maize | nucleus | 80.08 | 76.45 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 60.56 | 61.97 |
| KRH33202 | Soybean | nucleus | 57.82 | 59.29 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 60.29 | 57.93 |
| KRH66858 | Soybean | nucleus | 58.42 | 57.05 |
| KRG95191 | Soybean | nucleus | 58.36 | 57.02 |
| Solyc04g016370.2.1 | Tomato | nucleus | 58.49 | 56.86 |
| CDX72050 | Canola | cytosol | 55.68 | 56.55 |
| Bra007318.1-P | Field mustard | nucleus | 55.75 | 55.75 |
| CDY30994 | Canola | nucleus | 23.8 | 55.62 |
| Bra014632.1-P | Field mustard | cytosol | 56.15 | 55.48 |
| AT3G57300.2 | Thale cress | cytosol | 56.62 | 55.0 |
| CDX88940 | Canola | nucleus | 56.22 | 50.85 |
| CDY06115 | Canola | nucleus | 56.15 | 44.61 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 14.64 | 29.16 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 14.37 | 27.6 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 15.17 | 27.09 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 15.71 | 26.0 |
| TraesCS2A01G403300.2 | Wheat | cytosol, nucleus | 14.77 | 25.43 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 14.77 | 25.34 |
| TraesCS5A01G541400.1 | Wheat | cytosol | 13.97 | 23.7 |
| TraesCS1A01G091100.1 | Wheat | nucleus | 16.31 | 22.06 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 16.18 | 21.42 |
| TraesCS3A01G408500.1 | Wheat | nucleus | 15.04 | 19.57 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 15.71 | 17.29 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 21.06 | 14.61 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 16.38 | 14.18 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 17.71 | 11.96 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 17.11 | 11.4 |
| TraesCS7A01G203600.1 | Wheat | nucleus | 17.45 | 7.7 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DBINO | GO:GO:0000003 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0016043 | GO:GO:0016444 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0031011 | GO:GO:0042393 | GO:GO:0045739 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS4A01G147000 | EnsemblPlants:TraesCS4A01G147000.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:-:259756287..259776299
Molecular Weight (calculated)
170665.0 Da
IEP (calculated)
7.587
GRAVY (calculated)
-0.574
Length
1496 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPRRPSPRG AANGSGFSYS NLFNLEPLLN FKVPLPEDLD RYGNSSPNGS VSSQGQGSLS DQYNGVSDAS HGLHRKRKRH LGVASDDEEA DDHSNQITEE
0101: HYRTMLSEHV QKYRRSKDKE GVFGSDPPRA DTPQMIKHKN GNTRVMKYRS DFKDVAALGV LETSPEYNGM GSISAYGGFN KIVASLDSSY LDMGDNVSYL
0201: IPEGYDKLAS SLNLPVFSDI RVEEHFLNGT LDLRTLSAML GTDLKFEATS RGGLAEPQPQ HESLKERVKI QKFALQVTED PFAIPEGSAG RIRRSIISES
0301: GSLQVHYVKV LEKGDTYEII ERSLPKKQIV KKEHSENVKE DLASFLKRWH IIARNIPKHH RNFTALLKKR QMDAKRFSEN CQREVKLKVS RSLKLMRSAP
0401: VRTRKLARDM LIFWKRVDKE QYELRKREER DAAEALKREE ELREAKRQQQ RLNFLLSQTE LYSHFMQNKA GESALPDEGS APEVDDEEDP EEAELKREAF
0501: RAAQHAVSQQ KRMTNAFDSE IVRLCQSSES GIPTDDSATM EPSKIDLLHP STMPEQSSVQ TPELFKGVLK EYQLKGLQWL VNCYEQGLNG ILADEMGLGK
0601: TVQAMAFLSH LAEDKNIWGP FLVVAPASVV NNWAEEVIRF CPDLKILPYW GPERVVLRKN INPKRLYRRD ASFHILITNY QILVNEEKLL RRVKWQYMVL
0701: DEAQAIKSSS SQRWKTLLSF NCRNRLLLTG TPIQNNMAEL WALLHFIMPT LFDSHEQFNE WFSKGIEGHA EHGGTLNEHQ LSRLHAILKP FMLRRVKIDV
0801: IAEMTEKKEE IVPCRLSSRQ QIFYQAIKNK ISLNELLDGS RGNLNDKKLL SLMNIVMQLR KVCNHPELFE RNEGSYYFYF AEIPNSLLPP PFGELQDIHY
0901: AGKRNPIVFE IPKLVYEGII CNTEIPVDGC GFRNGYINRL FNIFLPSNIH NSAVPESTSR TTSILPSGAF GFTRLTNLSP VEASFLVTSS LFERLVFSAT
1001: RCKMEYVDEI VDLFLDSEGS DLQLSQYDAT KVRAVTRLLL SPKRADSSLL RTKFEIGLSD NPCEALVLSH HDRLVSNIRL LRSTYGFIPP ARAPPINVCC
1101: SDRNFAYKLT DEMHDPWIKK LFLGFARISE FNGPRILNGH NTFIQEVCTD LPIPEPMLQL PYRIFGSSPP MSNFDPAKML TDSGKLHTLD KLLRQLRAEN
1201: HRVLLFAQMT KMLDILEDYM NFRKFKYFRL DGSSAISDRR DMVRNFQNRN DIFVFLLSTR AGGLGINLTA ADTVIFYEID WNPTQDQQAM DRTHRLGQTK
1301: EVTVYRLICK DTIEEKILQR AKQKNAVQEL VMKGKQVQDD HLMRQEDVVS LLLDDTQIAH KLKEISMQAK DRLKKRRAKA IKVDKEGDLK LEDLDDPTEE
1401: PVEQDNTTSK KKKSSHKKPP KSQDNDGADG DVPESGPVKN EEHIASLRPK RSKRLVRSTG EDKEPVAACD VEKPADAAEN NDNNDAEELQ DQTPSA
0101: HYRTMLSEHV QKYRRSKDKE GVFGSDPPRA DTPQMIKHKN GNTRVMKYRS DFKDVAALGV LETSPEYNGM GSISAYGGFN KIVASLDSSY LDMGDNVSYL
0201: IPEGYDKLAS SLNLPVFSDI RVEEHFLNGT LDLRTLSAML GTDLKFEATS RGGLAEPQPQ HESLKERVKI QKFALQVTED PFAIPEGSAG RIRRSIISES
0301: GSLQVHYVKV LEKGDTYEII ERSLPKKQIV KKEHSENVKE DLASFLKRWH IIARNIPKHH RNFTALLKKR QMDAKRFSEN CQREVKLKVS RSLKLMRSAP
0401: VRTRKLARDM LIFWKRVDKE QYELRKREER DAAEALKREE ELREAKRQQQ RLNFLLSQTE LYSHFMQNKA GESALPDEGS APEVDDEEDP EEAELKREAF
0501: RAAQHAVSQQ KRMTNAFDSE IVRLCQSSES GIPTDDSATM EPSKIDLLHP STMPEQSSVQ TPELFKGVLK EYQLKGLQWL VNCYEQGLNG ILADEMGLGK
0601: TVQAMAFLSH LAEDKNIWGP FLVVAPASVV NNWAEEVIRF CPDLKILPYW GPERVVLRKN INPKRLYRRD ASFHILITNY QILVNEEKLL RRVKWQYMVL
0701: DEAQAIKSSS SQRWKTLLSF NCRNRLLLTG TPIQNNMAEL WALLHFIMPT LFDSHEQFNE WFSKGIEGHA EHGGTLNEHQ LSRLHAILKP FMLRRVKIDV
0801: IAEMTEKKEE IVPCRLSSRQ QIFYQAIKNK ISLNELLDGS RGNLNDKKLL SLMNIVMQLR KVCNHPELFE RNEGSYYFYF AEIPNSLLPP PFGELQDIHY
0901: AGKRNPIVFE IPKLVYEGII CNTEIPVDGC GFRNGYINRL FNIFLPSNIH NSAVPESTSR TTSILPSGAF GFTRLTNLSP VEASFLVTSS LFERLVFSAT
1001: RCKMEYVDEI VDLFLDSEGS DLQLSQYDAT KVRAVTRLLL SPKRADSSLL RTKFEIGLSD NPCEALVLSH HDRLVSNIRL LRSTYGFIPP ARAPPINVCC
1101: SDRNFAYKLT DEMHDPWIKK LFLGFARISE FNGPRILNGH NTFIQEVCTD LPIPEPMLQL PYRIFGSSPP MSNFDPAKML TDSGKLHTLD KLLRQLRAEN
1201: HRVLLFAQMT KMLDILEDYM NFRKFKYFRL DGSSAISDRR DMVRNFQNRN DIFVFLLSTR AGGLGINLTA ADTVIFYEID WNPTQDQQAM DRTHRLGQTK
1301: EVTVYRLICK DTIEEKILQR AKQKNAVQEL VMKGKQVQDD HLMRQEDVVS LLLDDTQIAH KLKEISMQAK DRLKKRRAKA IKVDKEGDLK LEDLDDPTEE
1401: PVEQDNTTSK KKKSSHKKPP KSQDNDGADG DVPESGPVKN EEHIASLRPK RSKRLVRSTG EDKEPVAACD VEKPADAAEN NDNNDAEELQ DQTPSA
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.