Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G365000.1 | Wheat | cytosol | 96.41 | 91.47 |
| TraesCS2B01G385300.1 | Wheat | cytosol | 96.15 | 91.45 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 77.92 | 80.83 |
| EER97913 | Sorghum | cytosol | 76.25 | 76.35 |
| Zm00001d007978_P003 | Maize | cytosol | 75.1 | 74.24 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 79.85 | 74.22 |
| EER93549 | Sorghum | cytosol | 79.59 | 74.16 |
| Zm00001d033827_P006 | Maize | cytosol | 78.95 | 72.52 |
| Os09t0442700-01 | Rice | cytosol | 78.31 | 72.19 |
| Os03t0722400-01 | Rice | cytosol | 78.56 | 72.08 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 77.79 | 69.5 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 64.06 | 65.74 |
| PGSC0003DMT400040011 | Potato | cytosol | 63.29 | 65.38 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 63.41 | 65.09 |
| PGSC0003DMT400038561 | Potato | cytosol | 62.39 | 63.95 |
| Solyc02g062780.2.1 | Tomato | cytosol | 62.13 | 62.78 |
| KRH76800 | Soybean | cytosol | 60.85 | 62.2 |
| KRH28662 | Soybean | cytosol | 60.72 | 61.99 |
| Bra012099.1-P | Field mustard | cytosol | 60.72 | 61.35 |
| CDY53848 | Canola | cytosol | 60.59 | 61.22 |
| AT5G66750.1 | Thale cress | cytosol | 59.95 | 61.13 |
| CDY30755 | Canola | cytosol | 60.72 | 61.11 |
| CDX81370 | Canola | cytosol | 59.82 | 60.84 |
| CDY57125 | Canola | cytosol | 59.56 | 60.57 |
| Solyc02g085390.2.1 | Tomato | cytosol | 62.39 | 59.93 |
| Bra037150.1-P | Field mustard | nucleus | 59.56 | 38.7 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 29.78 | 25.66 |
| TraesCS2A01G403300.2 | Wheat | cytosol, nucleus | 26.44 | 23.71 |
| TraesCS1A01G091100.1 | Wheat | nucleus | 32.86 | 23.15 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 33.25 | 22.92 |
| TraesCS5A01G541400.1 | Wheat | cytosol | 23.75 | 20.98 |
| TraesCS3A01G408500.1 | Wheat | nucleus | 27.34 | 18.52 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 27.73 | 15.89 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 27.6 | 14.37 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 30.68 | 13.83 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 29.52 | 10.67 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 29.52 | 10.38 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 27.86 | 9.67 |
| TraesCS7A01G203600.1 | Wheat | nucleus | 30.04 | 6.9 |
Protein Annotations
| MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2A01G368200 | EnsemblPlants:TraesCS2A01G368200.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:611934295..611940619
Molecular Weight (calculated)
88624.2 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.389
Length
779 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEARNEKAS DFVDASTSLP VKLEASCVAV LVHPIVEVLK AEEQPLHSTN EETSVDLEAK NNDASFITEV MTKEEEQLYE ARLKVEEEEA RKREQAARLA
101: LDPNACFSKL DELLTETQLY SEFLLEKMAQ ITDVKQNFLE VKDEEGSVED KKKGCGRKRK VNSKPQYNDK KAKTAVAAML TRSREDRSAY DDTLTEEERW
201: EKEQANLVPL MTGGQLKSYQ IKGVKGLISL WQNGLNGILA DQMGLGKTIQ TIGFLTHLKG NGMHGPYMII APLSTLSNWV NEISRFVPSL TGLIYHGDKV
301: AREIRRKFRP KTVGPDFPII ITSYEMAMSD AKYLARYKWK YVVVDEGHRL KNSKCKLLRK LKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ
401: EFESWFDFSG KGDEEQQEEA DEKKRVLVIS KLHAILCPFL LRRMKMDVEQ MLPRKKEIII YANMTAHQKQ IQTHLIEKTF DNYLLESTDI VLRRPGLKMK
501: LNNLMIQLRK NCAHPDLFNA AFDSTSLYPP TDKLLEQCGK FQLLDRLLES LLKQKHKVLI FSQWTKVLDI IEYYLYMKGL NICRIDGSVK LEDRMRQIAE
601: FNDLNSSMNV FILSTRAGGL GINLASADTC ILYDSDWNPQ MDLQAMDRCH RIGQTRPLHV YRLATANSVE GRIIKRAFGK LKLEHVVIGK GQFEQNSAKP
701: NVLDEEELLA LLRDEQDEED RMIQTDISDE DLLKVMDRSD LTGPPAAADA TPLIPLKGPG WEVVMASKSG GGVLSALTS
101: LDPNACFSKL DELLTETQLY SEFLLEKMAQ ITDVKQNFLE VKDEEGSVED KKKGCGRKRK VNSKPQYNDK KAKTAVAAML TRSREDRSAY DDTLTEEERW
201: EKEQANLVPL MTGGQLKSYQ IKGVKGLISL WQNGLNGILA DQMGLGKTIQ TIGFLTHLKG NGMHGPYMII APLSTLSNWV NEISRFVPSL TGLIYHGDKV
301: AREIRRKFRP KTVGPDFPII ITSYEMAMSD AKYLARYKWK YVVVDEGHRL KNSKCKLLRK LKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ
401: EFESWFDFSG KGDEEQQEEA DEKKRVLVIS KLHAILCPFL LRRMKMDVEQ MLPRKKEIII YANMTAHQKQ IQTHLIEKTF DNYLLESTDI VLRRPGLKMK
501: LNNLMIQLRK NCAHPDLFNA AFDSTSLYPP TDKLLEQCGK FQLLDRLLES LLKQKHKVLI FSQWTKVLDI IEYYLYMKGL NICRIDGSVK LEDRMRQIAE
601: FNDLNSSMNV FILSTRAGGL GINLASADTC ILYDSDWNPQ MDLQAMDRCH RIGQTRPLHV YRLATANSVE GRIIKRAFGK LKLEHVVIGK GQFEQNSAKP
701: NVLDEEELLA LLRDEQDEED RMIQTDISDE DLLKVMDRSD LTGPPAAADA TPLIPLKGPG WEVVMASKSG GGVLSALTS
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.