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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G088540.8 Barley cytosol 97.17 97.17
TraesCS4B01G372600.1 Wheat cytosol 97.05 97.05
TraesCS4D01G364600.1 Wheat cytosol, mitochondrion 96.15 96.15
OQU93492 Sorghum cytosol 82.65 80.37
Zm00001d048552_P005 Maize cytosol 81.29 79.31
GSMUA_AchrUn_... Banana cytosol 39.57 71.96
PGSC0003DMT400066819 Potato cytosol 27.78 66.04
VIT_15s0021g02180.t01 Wine grape cytosol 61.9 63.86
Solyc01g090650.1.1 Tomato cytosol, nucleus, plastid 44.1 63.46
CDX74702 Canola cytosol 61.22 62.07
KRH75253 Soybean cytosol, nucleus, plastid 61.68 61.96
CDY18960 Canola cytosol 60.77 61.68
AT2G44980.2 Thale cress cytosol 60.88 61.23
Bra004881.1-P Field mustard nucleus 43.65 59.51
TraesCS7A01G074600.1 Wheat cytosol 20.86 24.5
TraesCS2A01G368200.1 Wheat cytosol 20.98 23.75
TraesCS1A01G087900.1 Wheat nucleus 23.13 22.57
TraesCS4A01G261000.1 Wheat cytosol 21.2 22.32
TraesCS4A01G372200.1 Wheat cytosol, endoplasmic reticulum, nucleus 20.86 21.1
TraesCS1A01G091100.1 Wheat nucleus 25.62 20.43
TraesCS3A01G069900.2 Wheat nucleus 25.62 20.0
TraesCS2A01G403300.2 Wheat cytosol, nucleus 18.82 19.1
TraesCS3A01G408500.1 Wheat nucleus 21.54 16.52
TraesCS7A01G147100.2 Wheat nucleus 24.38 15.82
Os03t0352500-01 Rice nucleus 3.51 14.49
TraesCS4A01G147000.1 Wheat nucleus 23.7 13.97
TraesCS2A01G128400.1 Wheat nucleus 24.72 12.62
TraesCS2A01G227900.1 Wheat nucleus 26.19 10.29
TraesCS7A01G544700.1 Wheat nucleus 24.04 9.83
TraesCS6A01G034200.2 Wheat nucleus, plastid 23.81 9.48
TraesCS7A01G203600.1 Wheat nucleus 24.38 6.34
Os03t0352450-00 Rice nucleus 1.25 2.4
Protein Annotations
MapMan:12.4.1.1.1Gene3D:3.40.220.10Gene3D:3.40.50.10810Gene3D:3.40.50.300ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650
InterPro:IPR014001InterPro:IPR038718InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFscan:PS51192
PFscan:PS51194PANTHER:PTHR10799PANTHER:PTHR10799:SF853SMART:SM00487SMART:SM00490InterPro:SNF2-like_sf
InterPro:SNF2_NSUPFAM:SSF52540SUPFAM:SSF52949EnsemblPlantsGene:TraesCS5A01G541400EnsemblPlants:TraesCS5A01G541400.1TIGR:cd00046
TIGR:cd00079TIGR:cd03331SEG:seg:::
Description
No Description!
Coordinates
chr5A:+:698208572..698215663
Molecular Weight (calculated)
99258.2 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.275
Length
882 amino acids
Sequence
(BLAST)
001: MAATAYERRL LAAADLVLSA YGKSQIPRLS STDLGVTADL KPHQLDGVDW LIRRYHLGVN VLLGDEMGLG KTLQAISLLS YLKIKSIAPG PFLVLCPLSV
101: TDGWLSEFGK FCPTLKVIQY VGDKPHRRQI RRTIHEDVQK SSHSDELPFD VMLTSYDIAL MDQDFLSQVP WLYVVIDEAQ RLKNPSSVLY NVLEERFMMP
201: RRLLLTGTPV QNNLSELWAL MHFCMPSVFG PLDEFLSTFK EAGNLLSGSE ANKANRQFKI LKHILRAFML RRTKALLIES GILELPPLTE LTVMVPLAPL
301: QKKIYLSVLR KELQTLLSFT GGSSRHQSLQ NIVVQLRKAC SHPYLFSGIE PEPYEEGEHL VQASGKLIVL DLVLEKLHRL GHRVVLFAQM TQTLDILQDF
401: LELRNYTYER LDGSVRAEER FAAIRNFSSQ PTKGVVRDDS NPSGAFVFMI STRAGGVGLN LIGADTVIFY EQDWNPQADK QALQRTHRIG QLNHVLSINL
501: VSQRTIEEVI MRRAERKLKL SHNIFGDKDA TDGKGNDLGN EANDMRSIIF GLHQFDPADT AAETINEETL EKLKSMSENV IKMRTHEPSE KDDRAFEINP
601: DLTEGSGLVI TRACDSISID PGVDEAAYLS WVEKFKEASH SIEDVPVELE RQRPAPEDKL LKREANKKKA EEKRLAKWKD LGYQTLGVKV PDNIPNQNIS
701: NSGSVQLVYG DCTDPSKVCA AKPAIIFSCV DNSGTWGHGG MFDALTSLST YIPDAYHRAS EVDDLHMGDL HLIQLDEANC SRNLDAPLWV ALAVVQSYNP
801: KRKIPRSEIS MSDLELCLSK AAFSAAQRSA SIHMPRIGQR SGSQRSEWYT IERLLRKYAS LHGIDIFVYY FRRPTRQQPD SD
Best Arabidopsis Sequence Match ( AT2G44980.3 )
(BLAST)
001: MSKESSPPKV PSTTMEYERR LEAAAEIILE KEAKFSNTPP DCSEFGVTAT LKPHQVEGVS WLIQKYLLGV NVVLGDEMGL GKTLQAISFL SYLKFRQGLP
101: GPFLVLCPLS VTDGWVSEIN RFTPNLEVLR YVGDKYCRLD MRKSMYDHVK KSSKGHFLPF DVLLTTYDIA LVDQDFLSQI PWQYAIIDEA QRLKNPNSVL
201: YNVLLEQFLI PRRLLITGTP IQNNLTELWA LMHFCMPLVF GTLDQFLSAF KETGDGLSGL DVSNDKETYK SLKFILGAFM LRRTKSLLIE SGNLVLPPLT
301: ELTVMVPLVS LQKKIYTSIL RKELPGLLEL SSGGSNHTSL QNIVIQLRKA CSHPYLFPGI EPEPFEEGEH LVQASGKLLV LDQLLKRLHD SGHRVLLFSQ
401: MTSTLDILQD FMELRRYSYE RLDGSVRAEE RFAAIKNFSA KTERGLDSEV DGSNAFVFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK QALQRAHRIG
501: QISHVLSINL VTEHSVEEVI LRRAERKLQL SHNVVGDNME EKEEDGGDLR SLVFGLQRFD PEEIHNEESD NLKMVEISSL AEKVVAIRQN VEPDKEERRF
601: EINSSDTLLG NTSSASLDSE LDEASYLSWV EKLKEAARSS KDEKIIELGN RKNLSEERNL RIEAARKKAE EKKLATWGAH GYQSLSVEEP ILPDDVDSSS
701: DAGSVNFVFG DCTNPSTVSH EPAIIFSCVD DSGNWGRGGM FDALSKLSNT VPTAYHRASE FKDLHLGDLH LIKIDDNDDQ QNTQASKPLW VAVAVTQSYN
801: SRRKVPRSSI SIPDLESCLA KASFSASQKS ASLHMPRIGY QDGSDRSQWY TVERLLRKYS SIFTVKIFVY YYRRSP
Arabidopsis Description
CHR10Probable helicase CHR10 [Source:UniProtKB/Swiss-Prot;Acc:F4IV45]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.