Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU4Hr1G088540.8 | Barley | cytosol | 97.17 | 97.17 |
TraesCS4B01G372600.1 | Wheat | cytosol | 97.05 | 97.05 |
TraesCS4D01G364600.1 | Wheat | cytosol, mitochondrion | 96.15 | 96.15 |
OQU93492 | Sorghum | cytosol | 82.65 | 80.37 |
Zm00001d048552_P005 | Maize | cytosol | 81.29 | 79.31 |
GSMUA_AchrUn_... | Banana | cytosol | 39.57 | 71.96 |
PGSC0003DMT400066819 | Potato | cytosol | 27.78 | 66.04 |
VIT_15s0021g02180.t01 | Wine grape | cytosol | 61.9 | 63.86 |
Solyc01g090650.1.1 | Tomato | cytosol, nucleus, plastid | 44.1 | 63.46 |
CDX74702 | Canola | cytosol | 61.22 | 62.07 |
KRH75253 | Soybean | cytosol, nucleus, plastid | 61.68 | 61.96 |
CDY18960 | Canola | cytosol | 60.77 | 61.68 |
AT2G44980.2 | Thale cress | cytosol | 60.88 | 61.23 |
Bra004881.1-P | Field mustard | nucleus | 43.65 | 59.51 |
TraesCS7A01G074600.1 | Wheat | cytosol | 20.86 | 24.5 |
TraesCS2A01G368200.1 | Wheat | cytosol | 20.98 | 23.75 |
TraesCS1A01G087900.1 | Wheat | nucleus | 23.13 | 22.57 |
TraesCS4A01G261000.1 | Wheat | cytosol | 21.2 | 22.32 |
TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 20.86 | 21.1 |
TraesCS1A01G091100.1 | Wheat | nucleus | 25.62 | 20.43 |
TraesCS3A01G069900.2 | Wheat | nucleus | 25.62 | 20.0 |
TraesCS2A01G403300.2 | Wheat | cytosol, nucleus | 18.82 | 19.1 |
TraesCS3A01G408500.1 | Wheat | nucleus | 21.54 | 16.52 |
TraesCS7A01G147100.2 | Wheat | nucleus | 24.38 | 15.82 |
Os03t0352500-01 | Rice | nucleus | 3.51 | 14.49 |
TraesCS4A01G147000.1 | Wheat | nucleus | 23.7 | 13.97 |
TraesCS2A01G128400.1 | Wheat | nucleus | 24.72 | 12.62 |
TraesCS2A01G227900.1 | Wheat | nucleus | 26.19 | 10.29 |
TraesCS7A01G544700.1 | Wheat | nucleus | 24.04 | 9.83 |
TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 23.81 | 9.48 |
TraesCS7A01G203600.1 | Wheat | nucleus | 24.38 | 6.34 |
Os03t0352450-00 | Rice | nucleus | 1.25 | 2.4 |
Protein Annotations
MapMan:12.4.1.1.1 | Gene3D:3.40.220.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF853 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF52949 | EnsemblPlantsGene:TraesCS5A01G541400 | EnsemblPlants:TraesCS5A01G541400.1 | TIGR:cd00046 |
TIGR:cd00079 | TIGR:cd03331 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:698208572..698215663
Molecular Weight (calculated)
99258.2 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.275
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAYERRL LAAADLVLSA YGKSQIPRLS STDLGVTADL KPHQLDGVDW LIRRYHLGVN VLLGDEMGLG KTLQAISLLS YLKIKSIAPG PFLVLCPLSV
101: TDGWLSEFGK FCPTLKVIQY VGDKPHRRQI RRTIHEDVQK SSHSDELPFD VMLTSYDIAL MDQDFLSQVP WLYVVIDEAQ RLKNPSSVLY NVLEERFMMP
201: RRLLLTGTPV QNNLSELWAL MHFCMPSVFG PLDEFLSTFK EAGNLLSGSE ANKANRQFKI LKHILRAFML RRTKALLIES GILELPPLTE LTVMVPLAPL
301: QKKIYLSVLR KELQTLLSFT GGSSRHQSLQ NIVVQLRKAC SHPYLFSGIE PEPYEEGEHL VQASGKLIVL DLVLEKLHRL GHRVVLFAQM TQTLDILQDF
401: LELRNYTYER LDGSVRAEER FAAIRNFSSQ PTKGVVRDDS NPSGAFVFMI STRAGGVGLN LIGADTVIFY EQDWNPQADK QALQRTHRIG QLNHVLSINL
501: VSQRTIEEVI MRRAERKLKL SHNIFGDKDA TDGKGNDLGN EANDMRSIIF GLHQFDPADT AAETINEETL EKLKSMSENV IKMRTHEPSE KDDRAFEINP
601: DLTEGSGLVI TRACDSISID PGVDEAAYLS WVEKFKEASH SIEDVPVELE RQRPAPEDKL LKREANKKKA EEKRLAKWKD LGYQTLGVKV PDNIPNQNIS
701: NSGSVQLVYG DCTDPSKVCA AKPAIIFSCV DNSGTWGHGG MFDALTSLST YIPDAYHRAS EVDDLHMGDL HLIQLDEANC SRNLDAPLWV ALAVVQSYNP
801: KRKIPRSEIS MSDLELCLSK AAFSAAQRSA SIHMPRIGQR SGSQRSEWYT IERLLRKYAS LHGIDIFVYY FRRPTRQQPD SD
101: TDGWLSEFGK FCPTLKVIQY VGDKPHRRQI RRTIHEDVQK SSHSDELPFD VMLTSYDIAL MDQDFLSQVP WLYVVIDEAQ RLKNPSSVLY NVLEERFMMP
201: RRLLLTGTPV QNNLSELWAL MHFCMPSVFG PLDEFLSTFK EAGNLLSGSE ANKANRQFKI LKHILRAFML RRTKALLIES GILELPPLTE LTVMVPLAPL
301: QKKIYLSVLR KELQTLLSFT GGSSRHQSLQ NIVVQLRKAC SHPYLFSGIE PEPYEEGEHL VQASGKLIVL DLVLEKLHRL GHRVVLFAQM TQTLDILQDF
401: LELRNYTYER LDGSVRAEER FAAIRNFSSQ PTKGVVRDDS NPSGAFVFMI STRAGGVGLN LIGADTVIFY EQDWNPQADK QALQRTHRIG QLNHVLSINL
501: VSQRTIEEVI MRRAERKLKL SHNIFGDKDA TDGKGNDLGN EANDMRSIIF GLHQFDPADT AAETINEETL EKLKSMSENV IKMRTHEPSE KDDRAFEINP
601: DLTEGSGLVI TRACDSISID PGVDEAAYLS WVEKFKEASH SIEDVPVELE RQRPAPEDKL LKREANKKKA EEKRLAKWKD LGYQTLGVKV PDNIPNQNIS
701: NSGSVQLVYG DCTDPSKVCA AKPAIIFSCV DNSGTWGHGG MFDALTSLST YIPDAYHRAS EVDDLHMGDL HLIQLDEANC SRNLDAPLWV ALAVVQSYNP
801: KRKIPRSEIS MSDLELCLSK AAFSAAQRSA SIHMPRIGQR SGSQRSEWYT IERLLRKYAS LHGIDIFVYY FRRPTRQQPD SD
001: MSKESSPPKV PSTTMEYERR LEAAAEIILE KEAKFSNTPP DCSEFGVTAT LKPHQVEGVS WLIQKYLLGV NVVLGDEMGL GKTLQAISFL SYLKFRQGLP
101: GPFLVLCPLS VTDGWVSEIN RFTPNLEVLR YVGDKYCRLD MRKSMYDHVK KSSKGHFLPF DVLLTTYDIA LVDQDFLSQI PWQYAIIDEA QRLKNPNSVL
201: YNVLLEQFLI PRRLLITGTP IQNNLTELWA LMHFCMPLVF GTLDQFLSAF KETGDGLSGL DVSNDKETYK SLKFILGAFM LRRTKSLLIE SGNLVLPPLT
301: ELTVMVPLVS LQKKIYTSIL RKELPGLLEL SSGGSNHTSL QNIVIQLRKA CSHPYLFPGI EPEPFEEGEH LVQASGKLLV LDQLLKRLHD SGHRVLLFSQ
401: MTSTLDILQD FMELRRYSYE RLDGSVRAEE RFAAIKNFSA KTERGLDSEV DGSNAFVFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK QALQRAHRIG
501: QISHVLSINL VTEHSVEEVI LRRAERKLQL SHNVVGDNME EKEEDGGDLR SLVFGLQRFD PEEIHNEESD NLKMVEISSL AEKVVAIRQN VEPDKEERRF
601: EINSSDTLLG NTSSASLDSE LDEASYLSWV EKLKEAARSS KDEKIIELGN RKNLSEERNL RIEAARKKAE EKKLATWGAH GYQSLSVEEP ILPDDVDSSS
701: DAGSVNFVFG DCTNPSTVSH EPAIIFSCVD DSGNWGRGGM FDALSKLSNT VPTAYHRASE FKDLHLGDLH LIKIDDNDDQ QNTQASKPLW VAVAVTQSYN
801: SRRKVPRSSI SIPDLESCLA KASFSASQKS ASLHMPRIGY QDGSDRSQWY TVERLLRKYS SIFTVKIFVY YYRRSP
101: GPFLVLCPLS VTDGWVSEIN RFTPNLEVLR YVGDKYCRLD MRKSMYDHVK KSSKGHFLPF DVLLTTYDIA LVDQDFLSQI PWQYAIIDEA QRLKNPNSVL
201: YNVLLEQFLI PRRLLITGTP IQNNLTELWA LMHFCMPLVF GTLDQFLSAF KETGDGLSGL DVSNDKETYK SLKFILGAFM LRRTKSLLIE SGNLVLPPLT
301: ELTVMVPLVS LQKKIYTSIL RKELPGLLEL SSGGSNHTSL QNIVIQLRKA CSHPYLFPGI EPEPFEEGEH LVQASGKLLV LDQLLKRLHD SGHRVLLFSQ
401: MTSTLDILQD FMELRRYSYE RLDGSVRAEE RFAAIKNFSA KTERGLDSEV DGSNAFVFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK QALQRAHRIG
501: QISHVLSINL VTEHSVEEVI LRRAERKLQL SHNVVGDNME EKEEDGGDLR SLVFGLQRFD PEEIHNEESD NLKMVEISSL AEKVVAIRQN VEPDKEERRF
601: EINSSDTLLG NTSSASLDSE LDEASYLSWV EKLKEAARSS KDEKIIELGN RKNLSEERNL RIEAARKKAE EKKLATWGAH GYQSLSVEEP ILPDDVDSSS
701: DAGSVNFVFG DCTNPSTVSH EPAIIFSCVD DSGNWGRGGM FDALSKLSNT VPTAYHRASE FKDLHLGDLH LIKIDDNDDQ QNTQASKPLW VAVAVTQSYN
801: SRRKVPRSSI SIPDLESCLA KASFSASQKS ASLHMPRIGY QDGSDRSQWY TVERLLRKYS SIFTVKIFVY YYRRSP
Arabidopsis Description
CHR10Probable helicase CHR10 [Source:UniProtKB/Swiss-Prot;Acc:F4IV45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.