Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G364600.1 | Wheat | cytosol, mitochondrion | 97.28 | 97.28 |
| TraesCS5A01G541400.1 | Wheat | cytosol | 97.05 | 97.05 |
| HORVU4Hr1G088540.8 | Barley | cytosol | 96.71 | 96.71 |
| OQU93492 | Sorghum | cytosol | 82.09 | 79.82 |
| Zm00001d048552_P005 | Maize | cytosol | 80.84 | 78.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.89 | 70.72 |
| PGSC0003DMT400066819 | Potato | cytosol | 27.1 | 64.42 |
| VIT_15s0021g02180.t01 | Wine grape | cytosol | 61.68 | 63.63 |
| Solyc01g090650.1.1 | Tomato | cytosol, nucleus, plastid | 43.31 | 62.32 |
| CDX74702 | Canola | cytosol | 61.0 | 61.84 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 61.22 | 61.5 |
| CDY18960 | Canola | cytosol | 60.54 | 61.45 |
| AT2G44980.2 | Thale cress | cytosol | 60.66 | 61.0 |
| Bra004881.1-P | Field mustard | nucleus | 43.42 | 59.2 |
| TraesCS2B01G385300.1 | Wheat | cytosol | 21.43 | 23.08 |
| TraesCS4B01G053600.1 | Wheat | cytosol, plastid | 21.2 | 20.64 |
| TraesCS1B01G118900.2 | Wheat | nucleus | 25.4 | 20.25 |
| TraesCS3B01G083400.1 | Wheat | nucleus | 25.51 | 19.84 |
| TraesCS2B01G421200.3 | Wheat | cytosol | 18.71 | 18.52 |
| TraesCS1B01G106900.4 | Wheat | nucleus | 23.13 | 17.97 |
| TraesCS3B01G442200.1 | Wheat | nucleus | 21.43 | 16.42 |
| TraesCS7B01G050100.3 | Wheat | nucleus | 24.26 | 15.79 |
| Os03t0352500-01 | Rice | nucleus | 3.63 | 14.95 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 23.24 | 13.7 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 24.26 | 12.38 |
| TraesCS2B01G251900.1 | Wheat | nucleus | 25.62 | 10.08 |
| TraesCS7B01G468100.1 | Wheat | nucleus | 23.7 | 9.63 |
| TraesCS6B01G048200.2 | Wheat | nucleus, plastid | 23.7 | 9.46 |
| TraesCS7B01G110600.1 | Wheat | nucleus | 23.92 | 6.24 |
| Os03t0352450-00 | Rice | nucleus | 1.25 | 2.4 |
Protein Annotations
| MapMan:12.4.1.1.1 | Gene3D:3.40.220.10 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF853 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF52949 | EnsemblPlantsGene:TraesCS4B01G372600 | EnsemblPlants:TraesCS4B01G372600.1 | TIGR:cd00046 |
| TIGR:cd00079 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:657466910..657474689
Molecular Weight (calculated)
98261.0 Da
IEP (calculated)
6.898
GRAVY (calculated)
-0.291
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAYERRL LAAADLVLSA DGKPPLPRLS SADLGVTADL KPHQLDGVDW LIRRYHLGXX XXXXXXMGLG KTLQAISLLS YLKIKSIAPG PFLVLCPLSV
101: TDGWLSEFGK FCPTLKVIQY VGDKPHRRQI RRTIHDDVQK SSHSNELPFD VMLTSYDIAL MDQDFLSQIP WLYVVIDEAQ RLKNPSSVLY NVLEERFMMP
201: RRLLLTGTPV QNNLSELWAL MHFCMPSVFG PLDEFLSTFK EAGNLLSGSE ANKANRQFKI LKHILRAFML RRTKALLIES GILELPPLTE LTVMVPLAPL
301: QKKIYLSVLR KELQTLLSFT GGSSRHQSLQ NIVVQLRKAC SHPYLFSGIE PEPYEEGEHL VQASGKLIVL DLVLEKLHRL GHRVVLFAQM TQTLDILQDF
401: LELRNYTYER LDGSVRAEER FAAIRNFSSQ PTKGGVRDDS NPSGAFVFMI STRAGGVGLN LIGADTVIFY EQDWNPQADK QALQRTHRIG QLNHVLSINL
501: VSQRTIEEVI MRRAERKLKL SHNIFEDKDA TDGKGKDLGN EANDMRSIIF GLHQFDPADT AAETINEETL EKLKSMSENV IKMRTHEPSE KDDRAFEINP
601: DLTEGSGAVI TRACDSISID PGVDEAAYLS WVEKFKEASH SIEDVPVELE RQRPAPEDKL LKREANKKKA EEKRLAKWKD LGYQTLGVKV PDNIPNQNTS
701: DSGSVQLVYG DCTDPSKVCA AKPAIIFSCV DNSGTWGHGG MFDALTSLST YIPDAYHRAS EVDDLHMGDL HLIQLDEANC SRSLDAPLWV ALAVVQSYNP
801: KRKIPRSEIS MSDLELCLSK AAFSAAQRSA SIHMPRIGQR SGAHRSEWYT IERLLRKYAS LHGIDIFVYY FRRPSRQQPD SD
101: TDGWLSEFGK FCPTLKVIQY VGDKPHRRQI RRTIHDDVQK SSHSNELPFD VMLTSYDIAL MDQDFLSQIP WLYVVIDEAQ RLKNPSSVLY NVLEERFMMP
201: RRLLLTGTPV QNNLSELWAL MHFCMPSVFG PLDEFLSTFK EAGNLLSGSE ANKANRQFKI LKHILRAFML RRTKALLIES GILELPPLTE LTVMVPLAPL
301: QKKIYLSVLR KELQTLLSFT GGSSRHQSLQ NIVVQLRKAC SHPYLFSGIE PEPYEEGEHL VQASGKLIVL DLVLEKLHRL GHRVVLFAQM TQTLDILQDF
401: LELRNYTYER LDGSVRAEER FAAIRNFSSQ PTKGGVRDDS NPSGAFVFMI STRAGGVGLN LIGADTVIFY EQDWNPQADK QALQRTHRIG QLNHVLSINL
501: VSQRTIEEVI MRRAERKLKL SHNIFEDKDA TDGKGKDLGN EANDMRSIIF GLHQFDPADT AAETINEETL EKLKSMSENV IKMRTHEPSE KDDRAFEINP
601: DLTEGSGAVI TRACDSISID PGVDEAAYLS WVEKFKEASH SIEDVPVELE RQRPAPEDKL LKREANKKKA EEKRLAKWKD LGYQTLGVKV PDNIPNQNTS
701: DSGSVQLVYG DCTDPSKVCA AKPAIIFSCV DNSGTWGHGG MFDALTSLST YIPDAYHRAS EVDDLHMGDL HLIQLDEANC SRSLDAPLWV ALAVVQSYNP
801: KRKIPRSEIS MSDLELCLSK AAFSAAQRSA SIHMPRIGQR SGAHRSEWYT IERLLRKYAS LHGIDIFVYY FRRPSRQQPD SD
001: MSKESSPPKV PSTTMEYERR LEAAAEIILE KEAKFSNTPP DCSEFGVTAT LKPHQVEGVS WLIQKYLLGV NVVLGDEMGL GKTLQAISFL SYLKFRQGLP
101: GPFLVLCPLS VTDGWVSEIN RFTPNLEVLR YVGDKYCRLD MRKSMYDHVK KSSKGHFLPF DVLLTTYDIA LVDQDFLSQI PWQYAIIDEA QRLKNPNSVL
201: YNVLLEQFLI PRRLLITGTP IQNNLTELWA LMHFCMPLVF GTLDQFLSAF KETGDGLSGL DVSNDKETYK SLKFILGAFM LRRTKSLLIE SGNLVLPPLT
301: ELTVMVPLVS LQKKIYTSIL RKELPGLLEL SSGGSNHTSL QNIVIQLRKA CSHPYLFPGI EPEPFEEGEH LVQASGKLLV LDQLLKRLHD SGHRVLLFSQ
401: MTSTLDILQD FMELRRYSYE RLDGSVRAEE RFAAIKNFSA KTERGLDSEV DGSNAFVFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK QALQRAHRIG
501: QISHVLSINL VTEHSVEEVI LRRAERKLQL SHNVVGDNME EKEEDGGDLR SLVFGLQRFD PEEIHNEESD NLKMVEISSL AEKVVAIRQN VEPDKEERRF
601: EINSSDTLLG NTSSASLDSE LDEASYLSWV EKLKEAARSS KDEKIIELGN RKNLSEERNL RIEAARKKAE EKKLATWGAH GYQSLSVEEP ILPDDVDSSS
701: DAGSVNFVFG DCTNPSTVSH EPAIIFSCVD DSGNWGRGGM FDALSKLSNT VPTAYHRASE FKDLHLGDLH LIKIDDNDDQ QNTQASKPLW VAVAVTQSYN
801: SRRKVPRSSI SIPDLESCLA KASFSASQKS ASLHMPRIGY QDGSDRSQWY TVERLLRKYS SIFTVKIFVY YYRRSP
101: GPFLVLCPLS VTDGWVSEIN RFTPNLEVLR YVGDKYCRLD MRKSMYDHVK KSSKGHFLPF DVLLTTYDIA LVDQDFLSQI PWQYAIIDEA QRLKNPNSVL
201: YNVLLEQFLI PRRLLITGTP IQNNLTELWA LMHFCMPLVF GTLDQFLSAF KETGDGLSGL DVSNDKETYK SLKFILGAFM LRRTKSLLIE SGNLVLPPLT
301: ELTVMVPLVS LQKKIYTSIL RKELPGLLEL SSGGSNHTSL QNIVIQLRKA CSHPYLFPGI EPEPFEEGEH LVQASGKLLV LDQLLKRLHD SGHRVLLFSQ
401: MTSTLDILQD FMELRRYSYE RLDGSVRAEE RFAAIKNFSA KTERGLDSEV DGSNAFVFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK QALQRAHRIG
501: QISHVLSINL VTEHSVEEVI LRRAERKLQL SHNVVGDNME EKEEDGGDLR SLVFGLQRFD PEEIHNEESD NLKMVEISSL AEKVVAIRQN VEPDKEERRF
601: EINSSDTLLG NTSSASLDSE LDEASYLSWV EKLKEAARSS KDEKIIELGN RKNLSEERNL RIEAARKKAE EKKLATWGAH GYQSLSVEEP ILPDDVDSSS
701: DAGSVNFVFG DCTNPSTVSH EPAIIFSCVD DSGNWGRGGM FDALSKLSNT VPTAYHRASE FKDLHLGDLH LIKIDDNDDQ QNTQASKPLW VAVAVTQSYN
801: SRRKVPRSSI SIPDLESCLA KASFSASQKS ASLHMPRIGY QDGSDRSQWY TVERLLRKYS SIFTVKIFVY YYRRSP
Arabidopsis Description
CHR10Probable helicase CHR10 [Source:UniProtKB/Swiss-Prot;Acc:F4IV45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.