Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G365000.1 | Wheat | cytosol | 98.78 | 98.54 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 91.45 | 96.15 |
| EER97913 | Sorghum | cytosol | 73.75 | 77.64 |
| EER93549 | Sorghum | cytosol | 77.9 | 76.32 |
| Zm00001d007978_P003 | Maize | cytosol | 72.77 | 75.63 |
| Zm00001d033827_P006 | Maize | cytosol | 77.29 | 74.65 |
| Os03t0722400-01 | Rice | cytosol | 76.92 | 74.2 |
| Os09t0442700-01 | Rice | cytosol | 75.82 | 73.49 |
| TraesCS4B01G053600.1 | Wheat | cytosol, plastid | 77.78 | 70.31 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 61.9 | 66.8 |
| PGSC0003DMT400040011 | Potato | cytosol | 60.93 | 66.18 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 60.81 | 65.61 |
| PGSC0003DMT400038561 | Potato | cytosol | 60.07 | 64.74 |
| Solyc02g062780.2.1 | Tomato | cytosol | 60.07 | 63.81 |
| KRH76800 | Soybean | cytosol | 58.24 | 62.6 |
| KRH28662 | Soybean | cytosol | 58.12 | 62.39 |
| Bra012099.1-P | Field mustard | cytosol | 58.0 | 61.61 |
| AT5G66750.1 | Thale cress | cytosol | 57.39 | 61.52 |
| CDY53848 | Canola | cytosol | 57.88 | 61.48 |
| CDY30755 | Canola | cytosol | 58.0 | 61.37 |
| CDX81370 | Canola | cytosol | 57.27 | 61.23 |
| CDY57125 | Canola | cytosol | 57.14 | 61.1 |
| Solyc02g085390.2.1 | Tomato | cytosol | 60.07 | 60.67 |
| Bra037150.1-P | Field mustard | nucleus | 57.14 | 39.03 |
| TraesCS3B01G083400.1 | Wheat | nucleus | 32.97 | 23.81 |
| TraesCS1B01G118900.2 | Wheat | nucleus | 31.99 | 23.69 |
| TraesCS2B01G421200.3 | Wheat | cytosol | 25.15 | 23.12 |
| TraesCS1B01G106900.4 | Wheat | nucleus | 30.16 | 21.76 |
| TraesCS4B01G372600.1 | Wheat | cytosol | 23.08 | 21.43 |
| TraesCS3B01G442200.1 | Wheat | nucleus | 27.23 | 19.37 |
| TraesCS7B01G050100.3 | Wheat | nucleus | 26.37 | 15.94 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 26.37 | 14.44 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 30.04 | 14.24 |
| TraesCS7B01G468100.1 | Wheat | nucleus | 28.69 | 10.82 |
| TraesCS6B01G048200.2 | Wheat | nucleus, plastid | 28.57 | 10.59 |
| TraesCS2B01G251900.1 | Wheat | nucleus | 26.62 | 9.73 |
| TraesCS7B01G110600.1 | Wheat | nucleus | 29.79 | 7.21 |
Protein Annotations
| MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2B01G385300 | EnsemblPlants:TraesCS2B01G385300.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:548943161..548951290
Molecular Weight (calculated)
93050.0 Da
IEP (calculated)
6.208
GRAVY (calculated)
-0.418
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAIHDGNG DAGHFGEVDK VGVANQTNAE KMFEAENEKA SDFVDASTSL PVKLEASCVG VLVHPIVKAM KAEEQPLHST NEETSDEFLD VNSSVPIDLE
101: AKNDDASFIT EVMTKEEQQL YEARLKVEEE EARKREQAAR LALDPNACFS KLDELLTETQ LYSEFLLEKM EQFTDNFVEV KDEEESVEDK KKGCGRKRKV
201: NSKPQYNDKK AKTAVAAMLT RSREDRSAYD DALTEEERWE KEQANLVPLM TGGQLKSYQI KGVKWLISLW QNGLNGILAD QMGLGKTIQT IGFLTHLKGN
301: GMHGPYMIIA PLSTLSNWVN EISRFVPSLT GLIYHGDKVA RAEIRRKFRP KTVGPDFPII ITSYEMAMSD AKFLARYKWK YVVVDEGHRL KNSKCKLLRK
401: LKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ EFESWFDFSG KGDEEQQEEA DEKKRVLVVS KLHAILRPFL LRRMKVDVEQ MLPRKKEIII
501: YANMTAHQKQ IQTHLIEKTF DNYLFESTDI VLRRPGMKMK LNNLMIQLRK NCAHPDLFNA AFDSTSLYPP TDKLLEQCGK FQLFDRLLES LLKRRHKVLI
601: FSQWTKVLDI IEYYLYMKGL NICRIDGSVK LEDRMRQIAE FNDLNSSMNV FILSTRAGGL GINLASADTC ILYDSDWNPQ MDLQAMDRCH RIGQTRPVHV
701: YRLATSNSVE GRIIKRAFGK LKLEHVVIGK GQFEQNSAKP NVLDEEELLA LLRDERDEED RMIQTDISDE DLLKVMDRSD LTGPPAAADA PPLIPLKGPG
801: WEVVMASKSG GGVLSALTS
101: AKNDDASFIT EVMTKEEQQL YEARLKVEEE EARKREQAAR LALDPNACFS KLDELLTETQ LYSEFLLEKM EQFTDNFVEV KDEEESVEDK KKGCGRKRKV
201: NSKPQYNDKK AKTAVAAMLT RSREDRSAYD DALTEEERWE KEQANLVPLM TGGQLKSYQI KGVKWLISLW QNGLNGILAD QMGLGKTIQT IGFLTHLKGN
301: GMHGPYMIIA PLSTLSNWVN EISRFVPSLT GLIYHGDKVA RAEIRRKFRP KTVGPDFPII ITSYEMAMSD AKFLARYKWK YVVVDEGHRL KNSKCKLLRK
401: LKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ EFESWFDFSG KGDEEQQEEA DEKKRVLVVS KLHAILRPFL LRRMKVDVEQ MLPRKKEIII
501: YANMTAHQKQ IQTHLIEKTF DNYLFESTDI VLRRPGMKMK LNNLMIQLRK NCAHPDLFNA AFDSTSLYPP TDKLLEQCGK FQLFDRLLES LLKRRHKVLI
601: FSQWTKVLDI IEYYLYMKGL NICRIDGSVK LEDRMRQIAE FNDLNSSMNV FILSTRAGGL GINLASADTC ILYDSDWNPQ MDLQAMDRCH RIGQTRPVHV
701: YRLATSNSVE GRIIKRAFGK LKLEHVVIGK GQFEQNSAKP NVLDEEELLA LLRDERDEED RMIQTDISDE DLLKVMDRSD LTGPPAAADA PPLIPLKGPG
801: WEVVMASKSG GGVLSALTS
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.