Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012099.1-P | Field mustard | cytosol | 99.09 | 99.09 |
| CDY30755 | Canola | cytosol | 98.96 | 98.58 |
| CDY57125 | Canola | cytosol | 88.2 | 88.77 |
| CDX81370 | Canola | cytosol | 88.07 | 88.64 |
| AT5G66750.1 | Thale cress | cytosol | 86.51 | 87.3 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 72.5 | 73.65 |
| PGSC0003DMT400040011 | Potato | cytosol | 71.21 | 72.81 |
| PGSC0003DMT400038561 | Potato | cytosol | 69.78 | 70.79 |
| KRH76800 | Soybean | cytosol | 69.91 | 70.73 |
| KRH28662 | Soybean | cytosol | 69.65 | 70.38 |
| Solyc02g062780.2.1 | Tomato | cytosol | 69.52 | 69.52 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 66.02 | 67.06 |
| Solyc02g085390.2.1 | Tomato | cytosol | 69.91 | 66.46 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 61.74 | 63.38 |
| TraesCS7D01G069700.1 | Wheat | cytosol | 63.03 | 62.39 |
| EER97913 | Sorghum | cytosol | 62.65 | 62.08 |
| Zm00001d007978_P003 | Maize | cytosol | 62.78 | 61.42 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 61.22 | 60.59 |
| TraesCS4D01G053600.2 | Wheat | cytosol | 64.59 | 59.64 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 64.33 | 59.19 |
| EER93549 | Sorghum | cytosol | 63.03 | 58.13 |
| Os09t0442700-01 | Rice | cytosol | 63.68 | 58.11 |
| TraesCS2D01G365000.1 | Wheat | cytosol | 61.74 | 57.98 |
| TraesCS2B01G385300.1 | Wheat | cytosol | 61.48 | 57.88 |
| Os03t0722400-01 | Rice | cytosol | 63.68 | 57.83 |
| Zm00001d033827_P006 | Maize | cytosol | 62.65 | 56.96 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 63.55 | 56.19 |
| TraesCS4B01G053600.1 | Wheat | cytosol, plastid | 64.46 | 54.86 |
| CDY47176 | Canola | cytosol | 28.15 | 45.78 |
| CDX92595 | Canola | nucleus | 34.37 | 29.64 |
| CDY48619 | Canola | nucleus, plastid | 26.07 | 26.27 |
| CDY18857 | Canola | nucleus | 35.67 | 26.22 |
| CDY04120 | Canola | cytosol | 25.81 | 26.18 |
| CDY24695 | Canola | nucleus | 35.02 | 25.64 |
| CDY13907 | Canola | nucleus | 34.5 | 25.12 |
| CDY02609 | Canola | nucleus | 34.11 | 24.93 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 35.41 | 24.1 |
| CDY18840 | Canola | nucleus | 33.59 | 23.92 |
| CDY18960 | Canola | cytosol | 26.46 | 23.48 |
| CDX74702 | Canola | cytosol | 26.2 | 23.22 |
| CDX75208 | Canola | cytosol | 27.5 | 17.73 |
| CDX68802 | Canola | cytosol | 27.76 | 17.63 |
| CDY30994 | Canola | nucleus | 14.01 | 16.88 |
| CDY56279 | Canola | cytosol | 28.4 | 16.31 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 28.15 | 15.77 |
| CDY67658 | Canola | cytosol, nucleus | 21.4 | 14.61 |
| CDY37209 | Canola | nucleus | 31.52 | 14.41 |
| CDX81444 | Canola | nucleus | 31.65 | 14.41 |
| CDX72050 | Canola | cytosol | 27.5 | 14.39 |
| CDX88940 | Canola | nucleus | 29.83 | 13.91 |
| CDY68094 | Canola | nucleus | 21.4 | 13.23 |
| CDY08401 | Canola | nucleus | 31.91 | 12.27 |
| CDY52874 | Canola | nucleus | 31.91 | 12.2 |
| CDY06115 | Canola | nucleus | 27.37 | 11.21 |
| CDX95673 | Canola | cytosol | 13.88 | 10.87 |
| CDY37083 | Canola | plastid | 29.57 | 10.81 |
| CDY27338 | Canola | nucleus, plastid | 29.44 | 10.79 |
| CDX83383 | Canola | nucleus, plastid | 28.66 | 10.35 |
| CDY14410 | Canola | nucleus | 32.68 | 10.07 |
| CDY07678 | Canola | nucleus | 32.56 | 9.13 |
| CDX95672 | Canola | plastid | 8.43 | 6.02 |
| CDY71637 | Canola | nucleus | 2.59 | 2.7 |
Protein Annotations
| MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078IXV4 | UniProt:A0A078IXV4 | EnsemblPlants:CDY53848 |
| ProteinID:CDY53848 | ProteinID:CDY53848.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00011542001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | UniParc:UPI0004EDDDF8 | SEG:seg | : | : | : |
Description
BnaA07g37430DBnaA07g37430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXV4]
Coordinates
chrLK033243:-:25872..29728
Molecular Weight (calculated)
87376.5 Da
IEP (calculated)
6.064
GRAVY (calculated)
-0.563
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLRSTENT PASEMASDGK TEKDGSGDSP TSVLSDEENC EEKTATVVVE EEILLAKNGD SSLISEAMAQ EEEQLLQIRE DEEIAKRAAG SGEAPDLNDT
101: QFTKLDELLT QTQLYSEFLL EKMEDITKNG IEGETQKAEP EPEPEKKGRG RKRKAATQGD SMKAKKAVAA MISRSKEGRE SAESDLTEEE RVMKEQGELV
201: PLLTGGKLKS YQLKGVKWLI SLWQNGLNGI LADQMGLGKT IQTIGFLSHL KGNGLDGPYL VIAPLSTLSN WMNEISRFTP SINAIIYHGD KKERDELRKK
301: HMPRTVGPKF PIVITSYEVA MNDAKKNLRH YPWKYVVIDE GHRLKNHKCK LLRELRYLNM ENKLLLTGTP LQNNLSELWS LLNFILPDIF ASHDEFESWF
401: DFSGKNNNEA TKEEGEEKRR AQVVAKLHNI LRPFILRRMK CDVELSLPRK KEIIIYATMT DHQKKFQEHL VNHTLEAHIR DDTIRGHGLK GKLNNLAIQL
501: RKNCNHPDLL VGQLDGSYLY PPLEDIVGQC GKFRLLERLL VRLFAKNHRV LIFSQWTKIL DIMDYYFSEK GFEVCRIDGS VKLEERRRQI QEFNDEKSNC
601: RIFLLSTRAG GLGINLTAAD TCILYDSDWN PQMDLQAMDR CHRIGQTKPV HVYRLATAQS IEGRVLKRAY SKLKLEHVVI GKGQFHQERA KSSTPLEEDD
701: ILALLKDDEN AEDKLIQTDI SEEDLDRVLD RSDLMITLPG ETQAQEAFPV KGPGWEVVSS SAGGMLSSLN S
101: QFTKLDELLT QTQLYSEFLL EKMEDITKNG IEGETQKAEP EPEPEKKGRG RKRKAATQGD SMKAKKAVAA MISRSKEGRE SAESDLTEEE RVMKEQGELV
201: PLLTGGKLKS YQLKGVKWLI SLWQNGLNGI LADQMGLGKT IQTIGFLSHL KGNGLDGPYL VIAPLSTLSN WMNEISRFTP SINAIIYHGD KKERDELRKK
301: HMPRTVGPKF PIVITSYEVA MNDAKKNLRH YPWKYVVIDE GHRLKNHKCK LLRELRYLNM ENKLLLTGTP LQNNLSELWS LLNFILPDIF ASHDEFESWF
401: DFSGKNNNEA TKEEGEEKRR AQVVAKLHNI LRPFILRRMK CDVELSLPRK KEIIIYATMT DHQKKFQEHL VNHTLEAHIR DDTIRGHGLK GKLNNLAIQL
501: RKNCNHPDLL VGQLDGSYLY PPLEDIVGQC GKFRLLERLL VRLFAKNHRV LIFSQWTKIL DIMDYYFSEK GFEVCRIDGS VKLEERRRQI QEFNDEKSNC
601: RIFLLSTRAG GLGINLTAAD TCILYDSDWN PQMDLQAMDR CHRIGQTKPV HVYRLATAQS IEGRVLKRAY SKLKLEHVVI GKGQFHQERA KSSTPLEEDD
701: ILALLKDDEN AEDKLIQTDI SEEDLDRVLD RSDLMITLPG ETQAQEAFPV KGPGWEVVSS SAGGMLSSLN S
001: MVSLRSRKVI PASEMVSDGK TEKDASGDSP TSVLNEEENC EEKSVTVVEE EILLAKNGDS SLISEAMAQE EEQLLKLRED EEKANNAGSA VAPNLNETQF
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS
Arabidopsis Description
DDM1ATP-dependent DNA helicase DDM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.