Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83383 | Canola | nucleus, plastid | 98.88 | 45.57 |
| Bra000409.1-P | Field mustard | plastid | 98.88 | 45.0 |
| CDY37083 | Canola | plastid | 88.82 | 41.44 |
| CDY27338 | Canola | nucleus, plastid | 88.41 | 41.35 |
| AT2G46020.3 | Thale cress | plastid | 92.07 | 41.31 |
| VIT_15s0046g02290.t01 | Wine grape | plastid | 68.6 | 29.83 |
| KRH48113 | Soybean | nucleus | 65.85 | 29.11 |
| KRH40427 | Soybean | nucleus | 64.23 | 28.44 |
| KRH00799 | Soybean | nucleus | 64.13 | 28.4 |
| KRH06623 | Soybean | nucleus | 63.01 | 28.14 |
| Solyc01g094800.2.1 | Tomato | nucleus | 63.01 | 27.73 |
| OQU84199 | Sorghum | nucleus | 54.88 | 25.46 |
| Zm00001d014977_P002 | Maize | nucleus | 54.27 | 24.69 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 55.89 | 24.67 |
| GSMUA_Achr1P24350_001 | Banana | nucleus | 53.46 | 24.67 |
| HORVU6Hr1G006050.1 | Barley | plastid | 54.57 | 24.25 |
| TraesCS6B01G048200.2 | Wheat | nucleus, plastid | 54.27 | 24.16 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 54.27 | 24.11 |
| TraesCS6D01G039800.1 | Wheat | nucleus, plastid | 54.17 | 24.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.58 | 22.27 |
| CDY47176 | Canola | cytosol | 9.65 | 20.04 |
| CDX92595 | Canola | nucleus | 14.02 | 15.44 |
| CDY18857 | Canola | nucleus | 15.96 | 14.97 |
| CDY24695 | Canola | nucleus | 15.65 | 14.62 |
| CDY02609 | Canola | nucleus | 15.65 | 14.6 |
| CDY13907 | Canola | nucleus | 15.65 | 14.54 |
| CDY53848 | Canola | cytosol | 10.87 | 13.88 |
| CDY30755 | Canola | cytosol | 10.87 | 13.82 |
| CDX74702 | Canola | cytosol | 12.2 | 13.79 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 15.65 | 13.59 |
| CDX81370 | Canola | cytosol | 10.57 | 13.58 |
| CDY57125 | Canola | cytosol | 10.57 | 13.58 |
| CDY18840 | Canola | nucleus | 14.94 | 13.57 |
| CDY18960 | Canola | cytosol | 11.89 | 13.46 |
| CDY67658 | Canola | cytosol, nucleus | 13.62 | 11.87 |
| CDY68094 | Canola | nucleus | 14.63 | 11.55 |
| CDY04120 | Canola | cytosol | 8.84 | 11.45 |
| CDY48619 | Canola | nucleus, plastid | 8.84 | 11.37 |
| CDX68802 | Canola | cytosol | 13.52 | 10.96 |
| CDX75208 | Canola | cytosol | 13.31 | 10.95 |
| CDY56279 | Canola | cytosol | 14.74 | 10.8 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 14.63 | 10.47 |
| CDY37209 | Canola | nucleus | 16.46 | 9.61 |
| CDX81444 | Canola | nucleus | 16.46 | 9.57 |
| CDY08401 | Canola | nucleus | 16.06 | 7.88 |
| CDY52874 | Canola | nucleus | 15.96 | 7.78 |
| CDX72050 | Canola | cytosol | 10.67 | 7.13 |
| CDX88940 | Canola | nucleus | 11.79 | 7.01 |
| CDY14410 | Canola | nucleus | 15.85 | 6.23 |
| CDY07678 | Canola | nucleus | 16.26 | 5.82 |
| CDY06115 | Canola | nucleus | 10.57 | 5.52 |
| CDX95672 | Canola | plastid | 1.83 | 1.67 |
| CDY30994 | Canola | nucleus | 0.81 | 1.25 |
| CDY71637 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.920.10 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078E8I0 | InterPro:BRM | InterPro:Bromodomain |
| InterPro:Bromodomain-like_sf | EnsemblPlants:CDX95673 | ProteinID:CDX95673 | ProteinID:CDX95673.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008094 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0040029 | GO:GO:0043044 | EnsemblPlantsGene:GSBRNA2T00101559001 | InterPro:Helicase_C | InterPro:IPR001487 |
| InterPro:IPR001650 | InterPro:IPR036427 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF577 | SMART:SM00297 | SMART:SM00490 | InterPro:SNF2_N | SUPFAM:SSF47370 |
| SUPFAM:SSF52540 | UniParc:UPI0004EE80DA | SEG:seg | : | : | : |
Description
BnaC03g25540D
Coordinates
chrLK031890:+:584274..587799
Molecular Weight (calculated)
111097.0 Da
IEP (calculated)
7.541
GRAVY (calculated)
-0.864
Length
984 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRRRVEDVE GSLPPKVSVV LRCRMSAIQS AVYDWIKATG TLRVDPDDEK LRTQKSSIYQ AKIYRTLNNR CMELRKTCNH PLLNYPYFND LSKDFLVRSC
101: GKLWILDRIL IKLQRTGHRV LLFSTMTKLL DILEEYLQWR RLVYRRIDGT TSLEDRESAI VDFNDPDTDC FIFLLSIRAA GRGLNLQTAD TVVIYDPDPN
201: PKNEEQAVAR AHRIGQTREV KVIYMEAVVE KFSSHQKEDE LRSGGSIDVE DDLAGKDRYI GSIEGLIRNN IQQYKIDMAD EVINAGRFDQ RTTHEERRMT
301: LETLLHDEER YQETVHDVPS LHEVNRMIAR SEEEVELFDQ MDEEFDWTEE MTSHEQVPKW LRASTREVNT TVADLSKKPS KNMLSSSNLI VQTAGPGGER
401: KRGRPKSKKI NYKEIEDDIG GYSEESSEER NIDSGNEEEG DIEQFDDDEL IGALGNHQTN KDESDGENPV RGYDYPQRSG CYEKITPRDD AGSSGSSPES
501: HRSKEMASPV SSRKFGSLSA LDTRPGSVSK RLVDDTEDGE IAASGDSHID LQRSGSWAHE RDEGEEQVLQ PTIKRKRSIR LRPRQTGERI DGTDMPAAQP
601: LQVDRSYRSK LRTVVDSHGS RQEQSDSSSR LRSLPGKKVA NTSKLHVSSP KSGRLNTTQL PLEDNTEAAR ETWDGTSPIG SSNAGARMSH NIQKRCKTVI
701: SKLQRRIDKE GQQIVPMLTN LWKRIQTGYA AGGVNNLLEL REIDHRLERL EYAGVMELAS DVQYMLRGAM QFYGFSHEVR SEARKVHNLF FDLLKMSFPD
801: SDFGEARNAL SFSGPTPTLV STLSPRAVGI NQGKKQKPVN EEEPEPSSPQ RPQQRENSRI RVQIPQKETK LGGTSSHNDD SPILAHPGEL VICKKKRKDR
901: EKSAPRTRTA GSSSPVSPPA MVGRGLRSPV SGSGTRETRL AQQQRWPNQG THPNNSGAAG DSVGWANPVK RLRTDSGKRR PSHL
101: GKLWILDRIL IKLQRTGHRV LLFSTMTKLL DILEEYLQWR RLVYRRIDGT TSLEDRESAI VDFNDPDTDC FIFLLSIRAA GRGLNLQTAD TVVIYDPDPN
201: PKNEEQAVAR AHRIGQTREV KVIYMEAVVE KFSSHQKEDE LRSGGSIDVE DDLAGKDRYI GSIEGLIRNN IQQYKIDMAD EVINAGRFDQ RTTHEERRMT
301: LETLLHDEER YQETVHDVPS LHEVNRMIAR SEEEVELFDQ MDEEFDWTEE MTSHEQVPKW LRASTREVNT TVADLSKKPS KNMLSSSNLI VQTAGPGGER
401: KRGRPKSKKI NYKEIEDDIG GYSEESSEER NIDSGNEEEG DIEQFDDDEL IGALGNHQTN KDESDGENPV RGYDYPQRSG CYEKITPRDD AGSSGSSPES
501: HRSKEMASPV SSRKFGSLSA LDTRPGSVSK RLVDDTEDGE IAASGDSHID LQRSGSWAHE RDEGEEQVLQ PTIKRKRSIR LRPRQTGERI DGTDMPAAQP
601: LQVDRSYRSK LRTVVDSHGS RQEQSDSSSR LRSLPGKKVA NTSKLHVSSP KSGRLNTTQL PLEDNTEAAR ETWDGTSPIG SSNAGARMSH NIQKRCKTVI
701: SKLQRRIDKE GQQIVPMLTN LWKRIQTGYA AGGVNNLLEL REIDHRLERL EYAGVMELAS DVQYMLRGAM QFYGFSHEVR SEARKVHNLF FDLLKMSFPD
801: SDFGEARNAL SFSGPTPTLV STLSPRAVGI NQGKKQKPVN EEEPEPSSPQ RPQQRENSRI RVQIPQKETK LGGTSSHNDD SPILAHPGEL VICKKKRKDR
901: EKSAPRTRTA GSSSPVSPPA MVGRGLRSPV SGSGTRETRL AQQQRWPNQG THPNNSGAAG DSVGWANPVK RLRTDSGKRR PSHL
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF NVLVTTYEFI MYDRSKLSKV
1101: DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201: QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD
1301: FLVRSCGKLW ILDRILIKLQ RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL LSIRAAGRGL NLQTADTVVI
1401: YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501: EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG
1601: GPGGERKRGR PKSKKINYKE IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD YPPGSGSYKK NPPRDDAGSS
1701: GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801: EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ
1901: KRCKIVISKL QRRIDKEGQQ IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY GFSHEVRSEA KKVHNLFFDL
2001: LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101: KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF NVLVTTYEFI MYDRSKLSKV
1101: DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201: QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD
1301: FLVRSCGKLW ILDRILIKLQ RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL LSIRAAGRGL NLQTADTVVI
1401: YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501: EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG
1601: GPGGERKRGR PKSKKINYKE IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD YPPGSGSYKK NPPRDDAGSS
1701: GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801: EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ
1901: KRCKIVISKL QRRIDKEGQQ IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY GFSHEVRSEA KKVHNLFFDL
2001: LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101: KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.