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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48113 Soybean nucleus 95.82 94.83
KRH00799 Soybean nucleus 79.75 79.07
KRH40427 Soybean nucleus 79.21 78.53
VIT_15s0046g02290.t01 Wine grape plastid 75.22 73.22
Solyc01g094800.2.1 Tomato nucleus 66.32 65.34
Bra000409.1-P Field mustard plastid 64.09 65.31
CDX83383 Canola nucleus, plastid 63.01 65.01
AT2G46020.3 Thale cress plastid 64.46 64.75
CDY37083 Canola plastid 61.64 64.39
Bra039296.1-P Field mustard plastid 62.41 64.34
CDY27338 Canola nucleus, plastid 61.14 64.02
CDX95673 Canola cytosol 28.14 63.01
CDX95672 Canola plastid 30.28 61.76
CDY71637 Canola nucleus 20.56 61.22
OQU84199 Sorghum nucleus 55.83 57.99
GSMUA_AchrUn_... Banana nucleus, plastid 58.56 57.87
GSMUA_Achr1P24350_001 Banana nucleus 55.56 57.41
Zm00001d014977_P002 Maize nucleus 55.38 56.4
GSMUA_AchrUn_... Banana nucleus 54.38 55.82
TraesCS6A01G034200.2 Wheat nucleus, plastid 55.11 54.81
TraesCS6D01G039800.1 Wheat nucleus, plastid 54.88 54.63
TraesCS6B01G048200.2 Wheat nucleus, plastid 54.79 54.62
HORVU6Hr1G006050.1 Barley plastid 54.74 54.47
KRH35559 Soybean nucleus 15.84 32.56
KRG91253 Soybean nucleus 15.71 32.25
KRH27613 Soybean nucleus 15.21 31.51
KRH28662 Soybean cytosol 9.9 28.57
KRH76800 Soybean cytosol 9.8 28.35
KRG89166 Soybean nucleus 9.31 27.26
KRH49484 Soybean nucleus 9.26 27.06
KRH11241 Soybean nucleus 12.94 26.59
KRH50913 Soybean nucleus 12.71 26.46
KRH21031 Soybean nucleus 12.8 26.43
KRH02212 Soybean nucleus 12.39 25.78
KRH05279 Soybean nucleus 4.95 24.06
KRH75253 Soybean cytosol, nucleus, plastid 9.26 23.23
KRH02187 Soybean nucleus 14.07 22.41
KRH73568 Soybean nucleus 8.62 19.51
KRH33202 Soybean nucleus 11.98 18.09
KRH66858 Soybean nucleus 12.39 17.82
KRG95191 Soybean nucleus 12.35 17.77
KRH52357 Soybean nucleus 11.58 17.71
KRH61691 Soybean nucleus 11.53 17.61
KRH14560 Soybean nucleus 13.71 17.12
KRH71872 Soybean nucleus 13.84 14.94
KRH38118 Soybean nucleus 13.57 14.59
KRH42374 Soybean nucleus 14.03 14.28
KRH58495 Soybean nucleus 14.16 13.36
KRH50934 Soybean nucleus 19.38 11.27
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300UniProt:A0A0R0FWK1EMBL:ACUP02009855
InterPro:BRMInterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilEnsemblPlantsGene:GLYMA_16G035100GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0008094
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0040029GO:GO:0043044InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487
InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718EnsemblPlants:KRH06623
ProteinID:KRH06623ProteinID:KRH06623.1InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF08880
PFscan:PS51192PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297
SMART:SM00487SMART:SM00490SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370
SUPFAM:SSF52540UniParc:UPI0006ED86FCSEG:seg:::
Description
hypothetical protein
Coordinates
chr16:-:3320804..3332208
Molecular Weight (calculated)
246606.0 Da
IEP (calculated)
9.586
GRAVY (calculated)
-0.757
Length
2203 amino acids
Sequence
(BLAST)
0001: MQSGGGGGGR NPGVGSAGRT TTSSAAASPT SSSSASQLGL DSMQQQQQQQ QQQQIGSRQS FQQQLLRKPE GNEAFLAYQA GIQGVFGSNN FSSPSAMQLP
0101: QQPRKLHLGS NQDIQLRGQG VEQQMLNPVH QAYLQYALHA AQQRPTLGIQ SQQQTKMGML SSASLQDQEM RMGNLKMQDI MSMQAANQGQ GSSSRNSSER
0201: GARGDKQMDQ GQQMTPDQKS EGKPSTQGPT IGHLIPGNMI RPMQGPETQQ GIQNVVNTQI AVSAQLQAMQ AWARERNIDL SHPANAHLMA QLIPLMQSRM
0301: VSQSKVNESN IGAQSSPVPV SKQQVTSPAV ASESSAHANS SSDMSGQSGS SKARQTAPSS HLGSITNAGI AGNSSDMATQ QFNVHGRESQ APPRQPVVVG
0401: NGMPSMHSQQ SSANTNLGAD HPLNAKTSSS GPEPPQMQYT RQLNQSAPQA GGPTNEGGLG NPAKSQGRPA QMPQQRTNFT KQQLHVLKAQ ILAFRRLKKG
0501: EGTLPQELLR AIVPPPLEMQ AQQPNHSARG QNQDKPAGNI AAEQISPIES SAKEPQSIPS INGQSSLKHE SFARDEKSIV PPVHVQAVAP PVSKESAPTL
0601: SAGKKDQKSI GCSVKSNQDG ECVNNTTVRN ELALDRGKAI APQAPVSDTM QIKKPSQTST GPQPKDVGPT RKYHGPLFDF PFFTRKHDSF GSSMMLNNNN
0701: NLSLAYDVKD LLFEEGMEVL NKKRTENLKK IEGLLAVNLE RKRIRPDLVL RLQIEEKKLR LVDLQARLRD EIDQQQQEIM AMPDRPYRKF VRLCERQRME
0801: LARQVQASQR AVREKQLKSI FQWRKKLLEA HWAIRDARTA RNRGVAKYHE KMLREFSKRK DDDRNKRLEA LKNNDVDRYR EMLLEQQTSI PGDAAERYAV
0901: LSTFLTQTEE YLHKLGSKIT AAKNQQEVEE AAKAAAAAAR LQGLSEEEVR AAAACAGEEV MIRNRFLEMN APRDSSSVNK YYNLAHAVNE TVIRQPSMLR
1001: AGTLRDYQLV GLQWMLSLYN NKLNGILADE MGLGKTVQVM ALIAYLMEFK GNYGPHLIIV PNAVLVNWKS EFYNWLPSVS CIFYVGSKDH RSKLFSQEVC
1101: AMKFNVLVTT YEFIMYDRSK LSKIDWKYII IDEAQRMKDR DSVLARDLDR YRCQRRLLLT GTPLQNDLKE LWSLLNLLLP EVFDNKKAFN DWFSKPFQKE
1201: GPTQNVEDDW LETEKKVIII HRLHQILEPF MLRRRVEDVE GSLPPKVSIV LKCKMSAVQS AIYDWVKSTG TLRLDPEDEK HKLHRNPAYQ VKQYKTLNNR
1301: CMELRKTCNH PLLNYPFFSD LSKEFIVRSC GKLWILDRIL IKLQRTGHRV LLFSTMTKLL DILEEYLQWR RLVYRRIDGT TSLEDRESAI VDFNSPDSDC
1401: FIFLLSIRAA GRGLNLQSAD TVVIYDPDPN PKNEEQAVAR AHRIGQKREV KVIYMEAVVD KIASHQKEDE LRSGGTVDME DELAGKDRYM GSIESLIRNN
1501: IQQYKIDMAD EVINAGRFDQ RTTHEERRLT LETLLHDEER YQETVHDVPS LQEEMTRYDH VPKWLRANTR EVNAAIGALS KRSSKNTLLG GSIGIESSEF
1601: GSERKRGRPK GKKHPNYKEL DDEILEYSEV SSDERNEYAH EEGEMGEFDD DGYSMADGVQ TIDKDQLEDG LLCDAGYEFP QSLESARNNQ MVEEAGTSGS
1701: SSDSQRVRQI VSPSVSSQKF GSLSALDARP SSISKRMTDE LEEGEIAVSG DSHMDHQQSG SWIHDRDEGE DEQVLQKPKI KRKRSLRVRP RHATERPEEK
1801: SGSEMASHLA VQADHKYQAQ LRTDPESKLF GDSNASRHEQ NTPALKNKRT LPSRRVANTS KLHGSPKSSR LNCMSVPSQD AGDHSRESWE GKPINSSGSS
1901: AHGTKMTEII QRRCKNVISK LQRRIDKEGH EIVPLLMDLW KRIENSGSGN SLLDLRKIDQ RIDKFEYNGA TELVFDVQFM LKSAMHFYGF SHEVRTEARK
2001: VHDLFFEILK IAFPDTDFRD ARSALSFSSQ AAAGTVTSPR QAAVSQSKRH RLINEMETES YPSQRSLQRG SASSGENNRI KVHLPQRESR TGSGGGSSTR
2101: EQQQEDSSLL AHPGELVVCK KRRNDREKSA VKPKTGPVSP SSMRTPGPSS VPKEARLTQQ GSHAQGWAGQ PSQQPNGSGG SVGWANPVKR LRTDSGKRRP
2201: SHT
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.