Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61691 | Soybean | nucleus | 96.25 | 96.12 |
| Solyc08g029120.1.1 | Tomato | nucleus | 39.58 | 80.74 |
| KRH05279 | Soybean | nucleus | 24.86 | 79.03 |
| VIT_04s0008g05880.t01 | Wine grape | nucleus | 77.01 | 75.34 |
| CDY56279 | Canola | cytosol | 63.89 | 68.5 |
| Solyc06g065730.2.1 | Tomato | nucleus | 67.78 | 67.92 |
| Bra007814.1-P | Field mustard | nucleus | 64.24 | 67.77 |
| AT2G25170.3 | Thale cress | endoplasmic reticulum | 65.21 | 66.6 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 63.61 | 66.57 |
| GSMUA_Achr4P21270_001 | Banana | cytosol | 59.03 | 61.64 |
| CDX75208 | Canola | cytosol | 49.51 | 59.62 |
| CDX68802 | Canola | cytosol | 49.65 | 58.9 |
| Bra011311.1-P | Field mustard | nucleus | 49.38 | 58.57 |
| KXG19483 | Sorghum | cytosol | 53.06 | 57.7 |
| Zm00001d045109_P008 | Maize | cytosol | 52.92 | 57.12 |
| TraesCS7B01G050100.3 | Wheat | nucleus | 53.4 | 56.75 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 53.26 | 56.44 |
| AT4G31900.1 | Thale cress | nucleus | 46.74 | 55.99 |
| TraesCS7D01G148900.4 | Wheat | nucleus | 52.29 | 53.59 |
| KRH28662 | Soybean | cytosol | 15.83 | 29.88 |
| KRH76800 | Soybean | cytosol | 15.69 | 29.66 |
| KRH02212 | Soybean | nucleus | 19.79 | 26.91 |
| KRH50913 | Soybean | nucleus | 19.72 | 26.84 |
| KRH21031 | Soybean | nucleus | 19.86 | 26.8 |
| KRH11241 | Soybean | nucleus | 19.86 | 26.68 |
| KRG89166 | Soybean | nucleus | 13.89 | 26.6 |
| KRH49484 | Soybean | nucleus | 13.89 | 26.53 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 15.97 | 26.2 |
| KRG91253 | Soybean | nucleus | 18.47 | 24.79 |
| KRH35559 | Soybean | nucleus | 18.4 | 24.72 |
| KRH27613 | Soybean | nucleus | 18.12 | 24.55 |
| KRH73568 | Soybean | nucleus | 14.17 | 20.94 |
| KRH14560 | Soybean | nucleus | 24.38 | 19.9 |
| KRH42374 | Soybean | nucleus | 26.6 | 17.7 |
| KRH33202 | Soybean | nucleus | 17.43 | 17.2 |
| KRH66858 | Soybean | nucleus | 17.92 | 16.84 |
| KRH58495 | Soybean | nucleus | 27.15 | 16.75 |
| KRG95191 | Soybean | nucleus | 17.78 | 16.72 |
| KRH71872 | Soybean | nucleus | 19.86 | 14.01 |
| KRH38118 | Soybean | nucleus | 19.72 | 13.86 |
| KRH02187 | Soybean | nucleus | 12.64 | 13.16 |
| KRH48113 | Soybean | nucleus | 17.92 | 11.59 |
| KRH06623 | Soybean | nucleus | 17.71 | 11.58 |
| KRH40427 | Soybean | nucleus | 17.85 | 11.57 |
| KRH00799 | Soybean | nucleus | 17.71 | 11.48 |
| KRH50934 | Soybean | nucleus | 20.35 | 7.73 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100804203 | MapMan:12.4.1.1.5 | Gene3D:2.40.50.40 | Gene3D:3.30.40.10 | Gene3D:3.40.50.10810 |
| Gene3D:3.40.50.300 | EMBL:ACUP02003419 | InterPro:CHD_C2 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain |
| ncoils:Coil | InterPro:DUF1086 | InterPro:DUF1087 | EnsemblPlantsGene:GLYMA_06G063400 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1K8P5 | InterPro:IPR000953 |
| InterPro:IPR001650 | InterPro:IPR013083 | InterPro:IPR014001 | InterPro:IPR019787 | InterPro:IPR024934 | InterPro:IPR038718 |
| EnsemblPlants:KRH52357 | ProteinID:KRH52357 | ProteinID:KRH52357.1 | ProteinID:KRH52358.1 | ProteinID:KRH52359.1 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 | PFAM:PF00628 | PFAM:PF06461 | PFAM:PF06465 |
| PFAM:PF08074 | ScanProsite:PS01359 | PFscan:PS50013 | PFscan:PS50016 | PFscan:PS50903 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF853 | InterPro:Rubredoxin-like_dom | SMART:SM00249 | SMART:SM00298 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM01146 | SMART:SM01147 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI000233971F | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:4793016..4811419
Molecular Weight (calculated)
165118.0 Da
IEP (calculated)
5.098
GRAVY (calculated)
-0.672
Length
1440 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLVERLRV RSDRRPIYNL DDSDDDADLL PRNSGTTQEK IERIERSDAK ENLCQACGEN ENLVSCGTCT YAYHPKCLLP PLKGPLPDNW RCPECVSPLN
0101: DIDKILDCEM RPTTAADNDA TKLGSKQIFV KQYLVKWKGL SYLHCTWVPE KEFLKAFKTH PRLKTKVNNF HQKMASVNTS DEDFVAIRPE WTTVDRILAC
0201: RGDDDEREYL VKWKELPYDE CYWEFESDIS AFQPEIERFN RLRSRSSKFS SGKQKNSVKD DAELKKQQKE FQHYEQSPEF LSGGTLHPYQ LEGLNFLRFS
0301: WSKQTHVILA DEMGLGKTIQ SIAFLASLFK EGVSPHLVVA PLSTLRNWER EFATWAPHMN VLMYVGSAQA RSVIREYEFY FPKKQKKIKK KKSGHLISES
0401: KQDRIKFDVL LTSYEMINFD TASLKPIKWE CMIVDEGHRL KNKDSKLFSS LKQYSSRHRV LLTGTPLQNN LDELFMLMHF LDAGKFGSLE EFQEEFKDIN
0501: QEEQISRLHK MLAPHLLRRV KKDVMKELPP KKELILRIEL SSKQKEYYKA ILTRNYQILT RRGGAQISLI NVVMELRKLC CHPYMLEGVE PDIDDAKEAF
0601: KQLLESSGKL QLLDKMMVKL REQGHRVLIY SQFQHMLDLL EDYCAYKNWQ YERIDGKVGG AERQVRIDRF NAKNSSRFCF LLSTRAGGLG INLATADTVI
0701: IYDSDWNPHA DLQAMARAHR LGQTNKVLIY RLITRGTIEE RMMQMTKKKM VLEHLVVGRL KAQNINQEEL DDIIRYGSKE LFADENDEAG KSRQIHYDAA
0801: AIDRLLDRDQ VGDEEATLDD EDEDGFLKAF KVANFEYVDE AEAAAEEAAQ KRAMETLNSS ERTHFWEELL RDKYQEHKVE EFNALGKGKR NRKSMVSVEE
0901: DDLAGLEDVS SDGEDDNYEA ELTDGDSNST GITTARRPYK KKARTDSTEP LPLMEGEGKA FRVLGFNQNQ RAAFVQILMR FGVGDFDWKE FTSRMKQKTY
1001: EEIKDYGTLF LSHIAEDITD SATFTDGVPK EGLRIQDVLV RIAVLLLIRD KVKFVSQHPQ TPLFSDDILL RYPGLKGAKI WKEEHDYVLL RAVLKHGYGR
1101: WQAIVDDKDL KIQEVICQEL NLSFINLPVP GQVSSQAQNG ANLTNAEVSN NQSKENGGSD IAADGAQGSG DARNQAQLYQ DSSILYHFRD MQRRQVEFIK
1201: KRVLLLEKGL NAEYQKEYFG DPKANEVTNE ELKSETKATN FPGDKLGDTD TQMIDQLPQV QTIASEEISA ECDSDPTRLE LVRLYNEMCK AVEEDSMDLV
1301: QTSLAREPAE LNVVKNFPPL ETLCEDINKI LTPTQEQPIA EMPISNSDNK SEAMSHGENL GSKSPPISQD CKPKDSEDNE NKDMKIESES IKESCSSLLE
1401: EKNETPTLPD KEESKTEMDE TMNDAELNEN PEKSDAVLEG
0101: DIDKILDCEM RPTTAADNDA TKLGSKQIFV KQYLVKWKGL SYLHCTWVPE KEFLKAFKTH PRLKTKVNNF HQKMASVNTS DEDFVAIRPE WTTVDRILAC
0201: RGDDDEREYL VKWKELPYDE CYWEFESDIS AFQPEIERFN RLRSRSSKFS SGKQKNSVKD DAELKKQQKE FQHYEQSPEF LSGGTLHPYQ LEGLNFLRFS
0301: WSKQTHVILA DEMGLGKTIQ SIAFLASLFK EGVSPHLVVA PLSTLRNWER EFATWAPHMN VLMYVGSAQA RSVIREYEFY FPKKQKKIKK KKSGHLISES
0401: KQDRIKFDVL LTSYEMINFD TASLKPIKWE CMIVDEGHRL KNKDSKLFSS LKQYSSRHRV LLTGTPLQNN LDELFMLMHF LDAGKFGSLE EFQEEFKDIN
0501: QEEQISRLHK MLAPHLLRRV KKDVMKELPP KKELILRIEL SSKQKEYYKA ILTRNYQILT RRGGAQISLI NVVMELRKLC CHPYMLEGVE PDIDDAKEAF
0601: KQLLESSGKL QLLDKMMVKL REQGHRVLIY SQFQHMLDLL EDYCAYKNWQ YERIDGKVGG AERQVRIDRF NAKNSSRFCF LLSTRAGGLG INLATADTVI
0701: IYDSDWNPHA DLQAMARAHR LGQTNKVLIY RLITRGTIEE RMMQMTKKKM VLEHLVVGRL KAQNINQEEL DDIIRYGSKE LFADENDEAG KSRQIHYDAA
0801: AIDRLLDRDQ VGDEEATLDD EDEDGFLKAF KVANFEYVDE AEAAAEEAAQ KRAMETLNSS ERTHFWEELL RDKYQEHKVE EFNALGKGKR NRKSMVSVEE
0901: DDLAGLEDVS SDGEDDNYEA ELTDGDSNST GITTARRPYK KKARTDSTEP LPLMEGEGKA FRVLGFNQNQ RAAFVQILMR FGVGDFDWKE FTSRMKQKTY
1001: EEIKDYGTLF LSHIAEDITD SATFTDGVPK EGLRIQDVLV RIAVLLLIRD KVKFVSQHPQ TPLFSDDILL RYPGLKGAKI WKEEHDYVLL RAVLKHGYGR
1101: WQAIVDDKDL KIQEVICQEL NLSFINLPVP GQVSSQAQNG ANLTNAEVSN NQSKENGGSD IAADGAQGSG DARNQAQLYQ DSSILYHFRD MQRRQVEFIK
1201: KRVLLLEKGL NAEYQKEYFG DPKANEVTNE ELKSETKATN FPGDKLGDTD TQMIDQLPQV QTIASEEISA ECDSDPTRLE LVRLYNEMCK AVEEDSMDLV
1301: QTSLAREPAE LNVVKNFPPL ETLCEDINKI LTPTQEQPIA EMPISNSDNK SEAMSHGENL GSKSPPISQD CKPKDSEDNE NKDMKIESES IKESCSSLLE
1401: EKNETPTLPD KEESKTEMDE TMNDAELNEN PEKSDAVLEG
0001: MANLLQRLRR RTGPKPDYIE DKLDEYIREE QVEETGGSNQ DCPLGEIEKI LDREWRPTAS NNPNSSDNGT PTLVVVKQYL VKWKGLSYLH CSWVPEQEFE
0101: KAYKSHPHLK LKLRVTRFNA AMDVFIAENG AHEFIAIRPE WKTVDRIIAC REGDDGEEYL VKYKELSYRN SYWESESDIS DFQNEIQRFK DINSSSRRDK
0201: YVENERNREE FKQFDLTPEF LTGTLHTYQL EGLNFLRYSW SKKTNVILAD EMGLGKTIQS IAFLASLFEE NLSPHLVVAP LSTIRNWERE FATWAPHMNV
0301: VMYTGDSEAR DVIWEHEFYF SEGRKSKFDV LLTTYEMVHP GISVLSPIKW TCMIIDEGHR LKNQKSKLYS SLSQFTSKHI VLLTGTPLQN NLNELFALMH
0401: FLDADKFGSL EKFQDINKEE QISRLHQMLA PHLLRRLKKD VLKDKVPPKK ELILRVDMSS QQKEVYKAVI TNNYQVLTKK RDAKISNVLM KLRQVCSHPY
0501: LLPDFEPRFE DANEAFTKLL EASGKLQLLD KMMVKLKEQG HRVLIYTQFQ HTLYLLEDYF TFKNWNYERI DGKISGPERQ VRIDRFNAEN SNRFCFLLST
0601: RAGGIGINLA TADTVIIYDS DWNPHADLQA MARVHRLGQT NKVMIYRLIH KGTVEERMME ITKNKMLLEH LVVGKQHLCQ DELDDIIKYG SKELFSEEND
0701: EAGRSGKIHY DDAAIEQLLD RNHVDAVEVS LDDEEETDFL KNFKVASFEY VDDENEAAAL EEAQAIENNS SVRNADRTSH WKDLLKDKYE VQQAEELSAL
0801: GKRKRNGKQV MYAEDDLDGL EEISDEEDEY CLDDLKVTSD EEEEADEPEA ARQRKPRTVT RPYRKRARDN SEEIPLMEGE GRYLMVLGFN ETERDIFLRT
0901: FKRYGAGNFD WKEFVNPLYM KTYDEINKYG ILFLKHIAEN PTDNSTNFKD GVPKEGISSD ELLVSMTFMM LVKEKCQFLD NHPTAPVFSN YVISKYNLRN
1001: GAFSKEEHDR ILIPAVSKHG YGRWVAIVED EEIGFQEVAC KDLNIPFPPD TKSARKRICD HVGKRVKKME DAIKYEYAEK ILAEQAKAET KGTSFVDAEK
1101: EMLKNDPITS KKNSATAVDN KQGRVEMAQS YDQSVNEKSG ESFQTYLDIQ PLNRMPRESF KPLEPINEEI STRLSVGTDH DVEMDAADNI IVLD
0101: KAYKSHPHLK LKLRVTRFNA AMDVFIAENG AHEFIAIRPE WKTVDRIIAC REGDDGEEYL VKYKELSYRN SYWESESDIS DFQNEIQRFK DINSSSRRDK
0201: YVENERNREE FKQFDLTPEF LTGTLHTYQL EGLNFLRYSW SKKTNVILAD EMGLGKTIQS IAFLASLFEE NLSPHLVVAP LSTIRNWERE FATWAPHMNV
0301: VMYTGDSEAR DVIWEHEFYF SEGRKSKFDV LLTTYEMVHP GISVLSPIKW TCMIIDEGHR LKNQKSKLYS SLSQFTSKHI VLLTGTPLQN NLNELFALMH
0401: FLDADKFGSL EKFQDINKEE QISRLHQMLA PHLLRRLKKD VLKDKVPPKK ELILRVDMSS QQKEVYKAVI TNNYQVLTKK RDAKISNVLM KLRQVCSHPY
0501: LLPDFEPRFE DANEAFTKLL EASGKLQLLD KMMVKLKEQG HRVLIYTQFQ HTLYLLEDYF TFKNWNYERI DGKISGPERQ VRIDRFNAEN SNRFCFLLST
0601: RAGGIGINLA TADTVIIYDS DWNPHADLQA MARVHRLGQT NKVMIYRLIH KGTVEERMME ITKNKMLLEH LVVGKQHLCQ DELDDIIKYG SKELFSEEND
0701: EAGRSGKIHY DDAAIEQLLD RNHVDAVEVS LDDEEETDFL KNFKVASFEY VDDENEAAAL EEAQAIENNS SVRNADRTSH WKDLLKDKYE VQQAEELSAL
0801: GKRKRNGKQV MYAEDDLDGL EEISDEEDEY CLDDLKVTSD EEEEADEPEA ARQRKPRTVT RPYRKRARDN SEEIPLMEGE GRYLMVLGFN ETERDIFLRT
0901: FKRYGAGNFD WKEFVNPLYM KTYDEINKYG ILFLKHIAEN PTDNSTNFKD GVPKEGISSD ELLVSMTFMM LVKEKCQFLD NHPTAPVFSN YVISKYNLRN
1001: GAFSKEEHDR ILIPAVSKHG YGRWVAIVED EEIGFQEVAC KDLNIPFPPD TKSARKRICD HVGKRVKKME DAIKYEYAEK ILAEQAKAET KGTSFVDAEK
1101: EMLKNDPITS KKNSATAVDN KQGRVEMAQS YDQSVNEKSG ESFQTYLDIQ PLNRMPRESF KPLEPINEEI STRLSVGTDH DVEMDAADNI IVLD
Arabidopsis Description
CHR7CHD3-type chromatin-remodeling factor CHR7 [Source:UniProtKB/Swiss-Prot;Acc:F4JTF6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.