Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95191 | Soybean | nucleus | 82.25 | 78.38 |
| KRH66858 | Soybean | nucleus | 82.11 | 78.2 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 73.82 | 69.17 |
| Solyc04g016370.2.1 | Tomato | nucleus | 69.77 | 66.15 |
| AT3G57300.2 | Thale cress | cytosol | 67.31 | 63.77 |
| CDX72050 | Canola | cytosol | 64.29 | 63.68 |
| Bra014632.1-P | Field mustard | cytosol | 66.07 | 63.67 |
| Bra007318.1-P | Field mustard | nucleus | 64.98 | 63.37 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 61.69 | 61.56 |
| CDY30994 | Canola | nucleus | 26.73 | 60.94 |
| OQU92590 | Sorghum | nucleus | 57.37 | 59.57 |
| CDX88940 | Canola | nucleus | 65.87 | 58.1 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 59.42 | 58.03 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 59.29 | 57.82 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 59.29 | 57.82 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 59.42 | 57.0 |
| Zm00001d029180_P002 | Maize | nucleus | 59.22 | 56.66 |
| Zm00001d047471_P002 | Maize | nucleus | 57.78 | 53.8 |
| CDY06115 | Canola | nucleus | 64.77 | 50.19 |
| KRH76800 | Soybean | cytosol | 15.83 | 30.32 |
| KRH28662 | Soybean | cytosol | 15.63 | 29.88 |
| KRH49484 | Soybean | nucleus | 15.01 | 29.05 |
| KRG89166 | Soybean | nucleus | 14.8 | 28.72 |
| KRH05279 | Soybean | nucleus | 7.68 | 24.72 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 14.8 | 24.6 |
| KRH50913 | Soybean | nucleus | 16.66 | 22.97 |
| KRH21031 | Soybean | nucleus | 16.59 | 22.68 |
| KRH11241 | Soybean | nucleus | 16.66 | 22.67 |
| KRH02212 | Soybean | nucleus | 16.45 | 22.66 |
| KRH27613 | Soybean | nucleus | 16.45 | 22.58 |
| KRG91253 | Soybean | nucleus | 16.52 | 22.46 |
| KRH35559 | Soybean | nucleus | 16.45 | 22.39 |
| KRH73568 | Soybean | nucleus | 12.13 | 18.17 |
| KRH52357 | Soybean | nucleus | 17.2 | 17.43 |
| KRH61691 | Soybean | nucleus | 17.07 | 17.27 |
| KRH71872 | Soybean | nucleus | 21.8 | 15.58 |
| KRH38118 | Soybean | nucleus | 21.73 | 15.47 |
| KRH02187 | Soybean | nucleus | 14.6 | 15.4 |
| KRH14560 | Soybean | nucleus | 17.34 | 14.34 |
| KRH00799 | Soybean | nucleus | 18.37 | 12.06 |
| KRH06623 | Soybean | nucleus | 18.09 | 11.98 |
| KRH40427 | Soybean | nucleus | 18.23 | 11.97 |
| KRH48113 | Soybean | nucleus | 18.16 | 11.9 |
| KRH42374 | Soybean | nucleus | 17.61 | 11.88 |
| KRH58495 | Soybean | nucleus | 17.55 | 10.96 |
| KRH50934 | Soybean | nucleus | 18.51 | 7.13 |
Protein Annotations
| EntrezGene:100796167 | MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02006417 | ncoils:Coil |
| InterPro:DBINO | EnsemblPlantsGene:GLYMA_10G106500 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1LA43 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | EnsemblPlants:KRH33202 |
| ProteinID:KRH33202 | ProteinID:KRH33202.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0002964037 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:24134465..24150105
Molecular Weight (calculated)
167861.0 Da
IEP (calculated)
8.871
GRAVY (calculated)
-0.629
Length
1459 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRKSKRNHS FSYSTLFNLE PLKNFKLPRE DDDDFDYYGN NSQEDESRDS QGERENYCNG NVHAREQNSS SKRVWSENSD TDDENKGRYY GTHMTQERYQ
0101: SMLGDHVQKY KRRRKDAMSN TDQNQVVVPL VKSNNGLKIQ KSGNDCRGAS HAEERASEWL QDQKQGNFSR ADFKQQYGTD RIMYEPAVLD IGNGISYEIP
0201: PIYDKLAPML NLPNFLDIHV DEFYLKSTLD LGSLAAMRAA DKRFGTRNQA GMGEPLSQYE SLQARIKAMP ASNSPHKFSL KVSDVGLNLS IPEGAAGTIK
0301: RSILSEGGVL QVYYVKVLEK GDTYEIIERS LPKKQKVRKD SALIEKEEMD RIGKIWINIV RRDIAKHHRN FTNFHRKQLI DAKRFSDYCQ REVKMKVSRS
0401: LKWIKGANIR TRKLARDMLL LWKRVDKEMA EVRKREEKEA AEALRREQEL REAKRQQQRL NFLIQQTELY SHFMQNKSSV HSSDALPSVD ENTNDQDVLF
0501: DSSDAGHNEE EDPEEAELKK EALKAAQEAV SKQRMLTNAF DSACLRFRQV DEADSLTRQL AGGSNIDLQT PSTMPVVSTV QTPELFKGCL KEYQLKGLQW
0601: LVNCYEQGLN GILADEMGLG KTIQAMAFLA HLAEEKNIWG PFLVVAPASV LNNWNEELER FCPEIKRLPY WGGLSERAVL RKSINPKDLY RREAKFHILI
0701: TSYQLLVTDE KYFRRVKWQY MVLDEAQAIK SSNSIRWKTL LSFNCRNRLL LTGTPVQNNM AELWALLHFI MPTLFDSHEQ FNEWFSKGIE NHAEHGGTLN
0801: EHQLNRLHSI LKPFMLRRVK KDVISELTNK TEVMVHCKLS SRQQAFYQAI KNKISLAGLF DSNRGQLNDK KVMSLMNIVI QLRKVCNHPE LFERNEGSTY
0901: FYFGEIPNSL PPPPFGELEN IYYPGGHNPI SYEIPKLVYK EIIQSSAVGH GICRESFQKY FNIFRPENVH RSIFSEDIIV KSGNFGFTHL MDLSPQEVAF
1001: MATGSFMERL LFSMMRWERK FLDEVLDFLI ETTIGDPECY LEKGKVRAVS RMLLLPSRYE TKFLQKKFAT GPTNAPFEAL MVSHQDRLSS NARLLHSAYT
1101: YIPPTRAPPI CAHCSDRNFS YKMIEELHDP WVKRLFVGFA RTSECNGPRK PDNPSHLIEE IDSELPISQP ALQFTYGIFG SSPPVRNFDP AKLLTDSKKL
1201: QTLDILLKRL RAENHRVLLF AQMTKMLNIL EDYMNYRKYR YFRLDGSSTI QDRRDMVRDF QHRSDIFVFL LSTRAGGLGI NLTAADTVIF YESDWNPTLD
1301: LQAMDRAHRL GQTKDVTVYR LICKETVEEK ILHRASQKST VQNLVMTGGS VGGDLLAPED VVSLLLDDVQ LQQKLKEIPL QVKSKQKKKP NKAIRINEEG
1401: DASLEDLTNC LDQGTANHDT SMDPEGPKSS NKKTKTASDK QKPSPKCSQK KMKGSMSNR
0101: SMLGDHVQKY KRRRKDAMSN TDQNQVVVPL VKSNNGLKIQ KSGNDCRGAS HAEERASEWL QDQKQGNFSR ADFKQQYGTD RIMYEPAVLD IGNGISYEIP
0201: PIYDKLAPML NLPNFLDIHV DEFYLKSTLD LGSLAAMRAA DKRFGTRNQA GMGEPLSQYE SLQARIKAMP ASNSPHKFSL KVSDVGLNLS IPEGAAGTIK
0301: RSILSEGGVL QVYYVKVLEK GDTYEIIERS LPKKQKVRKD SALIEKEEMD RIGKIWINIV RRDIAKHHRN FTNFHRKQLI DAKRFSDYCQ REVKMKVSRS
0401: LKWIKGANIR TRKLARDMLL LWKRVDKEMA EVRKREEKEA AEALRREQEL REAKRQQQRL NFLIQQTELY SHFMQNKSSV HSSDALPSVD ENTNDQDVLF
0501: DSSDAGHNEE EDPEEAELKK EALKAAQEAV SKQRMLTNAF DSACLRFRQV DEADSLTRQL AGGSNIDLQT PSTMPVVSTV QTPELFKGCL KEYQLKGLQW
0601: LVNCYEQGLN GILADEMGLG KTIQAMAFLA HLAEEKNIWG PFLVVAPASV LNNWNEELER FCPEIKRLPY WGGLSERAVL RKSINPKDLY RREAKFHILI
0701: TSYQLLVTDE KYFRRVKWQY MVLDEAQAIK SSNSIRWKTL LSFNCRNRLL LTGTPVQNNM AELWALLHFI MPTLFDSHEQ FNEWFSKGIE NHAEHGGTLN
0801: EHQLNRLHSI LKPFMLRRVK KDVISELTNK TEVMVHCKLS SRQQAFYQAI KNKISLAGLF DSNRGQLNDK KVMSLMNIVI QLRKVCNHPE LFERNEGSTY
0901: FYFGEIPNSL PPPPFGELEN IYYPGGHNPI SYEIPKLVYK EIIQSSAVGH GICRESFQKY FNIFRPENVH RSIFSEDIIV KSGNFGFTHL MDLSPQEVAF
1001: MATGSFMERL LFSMMRWERK FLDEVLDFLI ETTIGDPECY LEKGKVRAVS RMLLLPSRYE TKFLQKKFAT GPTNAPFEAL MVSHQDRLSS NARLLHSAYT
1101: YIPPTRAPPI CAHCSDRNFS YKMIEELHDP WVKRLFVGFA RTSECNGPRK PDNPSHLIEE IDSELPISQP ALQFTYGIFG SSPPVRNFDP AKLLTDSKKL
1201: QTLDILLKRL RAENHRVLLF AQMTKMLNIL EDYMNYRKYR YFRLDGSSTI QDRRDMVRDF QHRSDIFVFL LSTRAGGLGI NLTAADTVIF YESDWNPTLD
1301: LQAMDRAHRL GQTKDVTVYR LICKETVEEK ILHRASQKST VQNLVMTGGS VGGDLLAPED VVSLLLDDVQ LQQKLKEIPL QVKSKQKKKP NKAIRINEEG
1401: DASLEDLTNC LDQGTANHDT SMDPEGPKSS NKKTKTASDK QKPSPKCSQK KMKGSMSNR
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.