Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92590 | Sorghum | nucleus | 86.62 | 94.02 |
| Zm00001d047471_P002 | Maize | nucleus | 87.15 | 84.81 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 79.34 | 80.88 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 79.21 | 80.86 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 78.89 | 80.41 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 78.69 | 78.9 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 58.16 | 60.67 |
| KRH33202 | Soybean | nucleus | 56.66 | 59.22 |
| KRH66858 | Soybean | nucleus | 57.7 | 57.44 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 58.62 | 57.42 |
| Solyc04g016370.2.1 | Tomato | nucleus | 57.77 | 57.24 |
| KRG95191 | Soybean | nucleus | 57.31 | 57.09 |
| CDX72050 | Canola | cytosol | 54.49 | 56.42 |
| CDY30994 | Canola | nucleus | 23.61 | 56.25 |
| Bra014632.1-P | Field mustard | cytosol | 55.54 | 55.94 |
| Bra007318.1-P | Field mustard | nucleus | 54.62 | 55.68 |
| AT3G57300.2 | Thale cress | cytosol | 55.61 | 55.06 |
| CDX88940 | Canola | nucleus | 55.67 | 51.33 |
| CDY06115 | Canola | nucleus | 54.89 | 44.45 |
| Zm00001d007978_P003 | Maize | cytosol | 14.49 | 28.05 |
| Zm00001d033827_P006 | Maize | cytosol | 14.62 | 26.3 |
| Zm00001d048552_P005 | Maize | cytosol | 13.77 | 23.23 |
| Zm00001d006798_P002 | Maize | nucleus | 16.92 | 23.12 |
| Zm00001d024816_P007 | Maize | cytosol | 16.79 | 23.06 |
| Zm00001d040831_P021 | Maize | nucleus | 16.39 | 22.32 |
| Zm00001d009312_P028 | Maize | nucleus | 16.52 | 22.3 |
| Zm00001d002656_P002 | Maize | nucleus | 14.03 | 21.86 |
| Zm00001d015595_P001 | Maize | cytosol | 2.82 | 21.83 |
| Zm00001d045109_P008 | Maize | cytosol | 15.28 | 17.47 |
| Zm00001d017660_P021 | Maize | nucleus | 20.79 | 15.37 |
| Zm00001d051507_P007 | Maize | nucleus | 20.39 | 15.09 |
| Zm00001d022405_P051 | Maize | nucleus | 16.39 | 14.5 |
| Zm00001d007089_P003 | Maize | nucleus | 15.28 | 13.41 |
| Zm00001d014977_P002 | Maize | nucleus | 17.77 | 12.53 |
| Zm00001d006428_P002 | Maize | nucleus | 16.26 | 11.32 |
| Zm00001d021541_P002 | Maize | nucleus | 16.46 | 11.28 |
| Zm00001d037346_P007 | Maize | nucleus | 17.44 | 6.98 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6K386 | ncoils:Coil | InterPro:DBINO |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | ProteinID:ONL98128.1 | ProteinID:ONL98130.1 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | UniParc:UPI000842D7E0 | EnsemblPlantsGene:Zm00001d029180 | EnsemblPlants:Zm00001d029180_P002 | EnsemblPlants:Zm00001d029180_T002 | SEG:seg |
Description
DNA helicase INO80
Coordinates
chr1:+:61214711..61233546
Molecular Weight (calculated)
174132.0 Da
IEP (calculated)
8.348
GRAVY (calculated)
-0.555
Length
1525 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPRRAPPRG GGGLSYSTLF NLEPLQNLRV PVPENLARYG NSSSNGSPSS EGQGSLLDQY NGVHDASHGL HRKRKKHPDG AGDDDHADAY SNKMMEDHYR
0101: AMLSEHVQKY RRSKFKEGAF ISDPSQVAIP QIKHKNGGKK VMKHISNFRD IAALNGIEAS HEYNWIECIE THGGFNKLVA SVDSTYLDMG DNIHYLVPEG
0201: YDKLALSLNL PISSDIRVEE HFLKGALDLC TLSAMLGTDQ RFEASSHGGL SEPLPQFESL KERVKVQKFS LQVTEDPFAI PEGAAGRIRR SIISETGNLQ
0301: VHYVKVLEKG DTYEIIERSL PKKQIVKKEP FVIVKEESEK TYKLWQYLAT KSIPKHHRNF TSLMKKRQVD AKRFSDSCQR EVKFKVRRSL KLMRCAAIRT
0401: RQLARDMLIF WKRVDKEQVF FLPLRCLQNM SLKMMTLKFF SRYQYELRKK EEREAAEALK REEELREAKR QQQRLNFLLS QTELYSHFMQ NKAGGSAPPD
0501: EEDVPDEDEE EDPEEAQLKR EALRAAQHAV SQQKMRTNAF DSETVRLRQT SESVLPTDDS SSMDPSKIDL LHPSTMPEKS SVQTPELFKG VLKEYQLKGL
0601: QWLVNCYEQG LNGILADEMG LGKTVQAMAF LSHLAEDKNI WGPFLVVAPA SVVNNWAEEL IRFCPDLKIL PYWGPERMIL RKNINPKRLY RRDASFHILI
0701: TNYQILVNEE KLLRRVKWQY MVLDEAQAIK SSSSQRWKTL LSFSCRNRLL LTGTPIQNNM AELWALLHFI MPTLFDSHEQ FNEWFSKGIE GHAEHGGALN
0801: EHQLSRLHAI LKPFMLRRVK IDVIAEMTKK KEEIVPCKLS SRQQIFYQAI KNKISLNELL DGSRGNLNDK KLLSLMNIVM QLRKVCNHPE LFERNEGSSY
0901: FYFADIPNSL LSPPFGALQD VHYAGKRNPI IFEIPKLVYD GIICNTENSG SICGFQNGYL NRLFNIFLPS NIHRSAIPEV NSSNESVLSS GAFGFTRLSN
1001: LCPVEAFFLA TSSFFEGLAF SVMRWNRNYT DEIMDAFLDS EDTDIQFSQN DSTRVRAVAR LLLSSTKAKP SLLRTKIGTG PSEGPYEALV LSHHDRLASN
1101: IRVLRSAYTY IPPARAPPIN VSCADRNFAY KFTDEMYDPW VMKLFLGFAR TSEFNGPRQP VALHPLIQEL NTDLPILEPM LQLPYRIFGS SPPMSNFDPA
1201: KMLTDSGKLH TLDMLLRRLR AEGHRVLLFA QMTKMLDILE DYMNFRKFKY FRLDGSSAIS DRRDMVRAFQ NRNDVFVFLL STRAGGLGIN LTAADTVIFY
1301: EIDWNPTQDQ QAMDRTHRLG QTKEVTVYRL ICKDTIEEKI LQRAKQKNAV QELVMKGKHV QDDHLLRQED VVSLLIDDTQ IAHKLKEISM QAKDRQKKRR
1401: AKSIKVDKEG DLTLEDLDDA TATAEAVDQD KTSKKKKSSH KKHTNTHDND STDKNGEPDV GGDHPGSIHT ENEQIGEPRP KRSKRLMKSI TDKELAAAAG
1501: DEEPAENHRA HDYDGTEEVQ DGTAA
0101: AMLSEHVQKY RRSKFKEGAF ISDPSQVAIP QIKHKNGGKK VMKHISNFRD IAALNGIEAS HEYNWIECIE THGGFNKLVA SVDSTYLDMG DNIHYLVPEG
0201: YDKLALSLNL PISSDIRVEE HFLKGALDLC TLSAMLGTDQ RFEASSHGGL SEPLPQFESL KERVKVQKFS LQVTEDPFAI PEGAAGRIRR SIISETGNLQ
0301: VHYVKVLEKG DTYEIIERSL PKKQIVKKEP FVIVKEESEK TYKLWQYLAT KSIPKHHRNF TSLMKKRQVD AKRFSDSCQR EVKFKVRRSL KLMRCAAIRT
0401: RQLARDMLIF WKRVDKEQVF FLPLRCLQNM SLKMMTLKFF SRYQYELRKK EEREAAEALK REEELREAKR QQQRLNFLLS QTELYSHFMQ NKAGGSAPPD
0501: EEDVPDEDEE EDPEEAQLKR EALRAAQHAV SQQKMRTNAF DSETVRLRQT SESVLPTDDS SSMDPSKIDL LHPSTMPEKS SVQTPELFKG VLKEYQLKGL
0601: QWLVNCYEQG LNGILADEMG LGKTVQAMAF LSHLAEDKNI WGPFLVVAPA SVVNNWAEEL IRFCPDLKIL PYWGPERMIL RKNINPKRLY RRDASFHILI
0701: TNYQILVNEE KLLRRVKWQY MVLDEAQAIK SSSSQRWKTL LSFSCRNRLL LTGTPIQNNM AELWALLHFI MPTLFDSHEQ FNEWFSKGIE GHAEHGGALN
0801: EHQLSRLHAI LKPFMLRRVK IDVIAEMTKK KEEIVPCKLS SRQQIFYQAI KNKISLNELL DGSRGNLNDK KLLSLMNIVM QLRKVCNHPE LFERNEGSSY
0901: FYFADIPNSL LSPPFGALQD VHYAGKRNPI IFEIPKLVYD GIICNTENSG SICGFQNGYL NRLFNIFLPS NIHRSAIPEV NSSNESVLSS GAFGFTRLSN
1001: LCPVEAFFLA TSSFFEGLAF SVMRWNRNYT DEIMDAFLDS EDTDIQFSQN DSTRVRAVAR LLLSSTKAKP SLLRTKIGTG PSEGPYEALV LSHHDRLASN
1101: IRVLRSAYTY IPPARAPPIN VSCADRNFAY KFTDEMYDPW VMKLFLGFAR TSEFNGPRQP VALHPLIQEL NTDLPILEPM LQLPYRIFGS SPPMSNFDPA
1201: KMLTDSGKLH TLDMLLRRLR AEGHRVLLFA QMTKMLDILE DYMNFRKFKY FRLDGSSAIS DRRDMVRAFQ NRNDVFVFLL STRAGGLGIN LTAADTVIFY
1301: EIDWNPTQDQ QAMDRTHRLG QTKEVTVYRL ICKDTIEEKI LQRAKQKNAV QELVMKGKHV QDDHLLRQED VVSLLIDDTQ IAHKLKEISM QAKDRQKKRR
1401: AKSIKVDKEG DLTLEDLDDA TATAEAVDQD KTSKKKKSSH KKHTNTHDND STDKNGEPDV GGDHPGSIHT ENEQIGEPRP KRSKRLMKSI TDKELAAAAG
1501: DEEPAENHRA HDYDGTEEVQ DGTAA
0001: MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ
0101: RLRKVALNIS KDMKKFWMKV LYKHQLVRNE KKKKAMDKQL EFLLGQTERY STMLAENLVE PYKQGQNTPS KPLLTIESKS DEERAEQIPP EINSSAGLES
0201: GSPELDEDYD LKSEDETEDD EDTIEEDEKH FTKRERQEEL EALQNEVDLP VEELLRRYTS GRVSRETSPV KDENEDNLTS VSRVTSPVKD ENQDNLASVG
0301: QDHGEDKNNL AASEETEGNP SVRRSNDSYG HLAISETHSH DLEPGMTTAS VKSRKEDHTY DFNDEQEDVD FVLANGEEKD DEATLAVEEE LAKADNEDHV
0401: EEIALLQKES EMPIEVLLAR YKEDFGGKDI SEDESESSFA VSEDSIVDSD ENRQQADLDD DNVDLTECKL DPEPCSENVE GTFHEVAEDN DKDSSDKIAD
0501: AAAAARSAQP TGFTYSTTKV RTKLPFLLKH SLREYQHIGL DWLVTMYEKK LNGILADEMG LGKTIMTIAL LAHLACDKGI WGPHLIVVPT SVMLNWETEF
0601: LKWCPAFKIL TYFGSAKERK LKRQGWMKLN SFHVCITTYR LVIQDSKMFK RKKWKYLILD EAHLIKNWKS QRWQTLLNFN SKRRILLTGT PLQNDLMELW
0701: SLMHFLMPHV FQSHQEFKDW FCNPIAGMVE GQEKINKEVI DRLHNVLRPF LLRRLKRDVE KQLPSKHEHV IFCRLSKRQR NLYEDFIAST ETQATLTSGS
0801: FFGMISIIMQ LRKVCNHPDL FEGRPIVSSF DMAGIDVQLS STICSLLLES PFSKVDLEAL GFLFTHLDFS MTSWEGDEIK AISTPSELIK QRVNLKDDLE
0901: AIPLSPKNRK NLQGTNIFEE IRKAVFEERI QESKDRAAAI AWWNSLRCQR KPTYSTSLRT LLTIKGPLDD LKANCSSYMY SSILADIVLS PIERFQKMIE
1001: LVEAFTFAIP AARVPSPTCW CSKSDSPVFL SPSYKEKVTD LLSPLLSPIR PAIVRRQVYF PDRRLIQFDC GKLQELAMLL RKLKFGGHRA LIFTQMTKML
1101: DVLEAFINLY GYTYMRLDGS TPPEERQTLM QRFNTNPKIF LFILSTRSGG VGINLVGADT VIFYDSDWNP AMDQQAQDRC HRIGQTREVH IYRLISESTI
1201: EENILKKANQ KRVLDNLVIQ NGEYNTEFFK KLDPMELFSG HKALTTKDEK ETSKHCGADI PLSNADVEAA LKQAEDEADY MALKRVEQEE AVDNQEFTEE
1301: PVERPEDDEL VNEDDIKADE PADQGLVAAG PAKEEMSLLH SDIRDERAVI TTSSQEDDTD VLDDVKQMAA AAADAGQAIS SFENQLRPID RYAIRFLELW
1401: DPIIVEAAME NEAGFEEKEW ELDHIEKYKE EMEAEIDDGE EPLVYEKWDA DFATEAYRQQ VEVLAQHQLM EDLENEARER EAAEVAEMVL TQNESAHVLK
1501: PKKKKKAKKA KYKSLKKGSL AAESKHVKSV VKIEDSTDDD NEEFGYVSSS DSDMVTPLSR MHMKGKKRDL IVDTDEEKTS KKKAKKHKKS LPNSDIKYKQ
1601: TSALLDELEP SKPSDSMVVD NELKLTNRGK TVGKKFITSM PIKRVLMIKP EKLKKGNLWS RDCVPSPDSW LPQEDAILCA MVHEYGPNWN FVSGTLYGMT
1701: AGGAYRGRYR HPAYCCERYR ELIQRHILSA SDSAVNEKNL NTGSGKALLK VTEENIRTLL NVAAEQPDTE MLLQKHFSCL LSSIWRTSTR TGNDQMLSLN
1801: SPIFNRQFMG SVNHTQDLAR KPWQGMKVTS LSRKLLESAL QDSGPSQPDN TISRSRLQET QPINKLGLEL TLEFPRGNDD SLNQFPPMIS LSIDGSDSLN
1901: YVNEPPGEDV LKGSRVAAEN RYRNAANACI EDSFGWASNT FPANDLKSRT GTKAQSLGKH KLSASDSAKS TKSKHRKLLA EQLEGAWVRP NDPNLKFDFT
2001: PGDREEEEEQ EVDEKANSAE IEMISCSQWY DPFFTSGLDD CSLASDISEI E
0101: RLRKVALNIS KDMKKFWMKV LYKHQLVRNE KKKKAMDKQL EFLLGQTERY STMLAENLVE PYKQGQNTPS KPLLTIESKS DEERAEQIPP EINSSAGLES
0201: GSPELDEDYD LKSEDETEDD EDTIEEDEKH FTKRERQEEL EALQNEVDLP VEELLRRYTS GRVSRETSPV KDENEDNLTS VSRVTSPVKD ENQDNLASVG
0301: QDHGEDKNNL AASEETEGNP SVRRSNDSYG HLAISETHSH DLEPGMTTAS VKSRKEDHTY DFNDEQEDVD FVLANGEEKD DEATLAVEEE LAKADNEDHV
0401: EEIALLQKES EMPIEVLLAR YKEDFGGKDI SEDESESSFA VSEDSIVDSD ENRQQADLDD DNVDLTECKL DPEPCSENVE GTFHEVAEDN DKDSSDKIAD
0501: AAAAARSAQP TGFTYSTTKV RTKLPFLLKH SLREYQHIGL DWLVTMYEKK LNGILADEMG LGKTIMTIAL LAHLACDKGI WGPHLIVVPT SVMLNWETEF
0601: LKWCPAFKIL TYFGSAKERK LKRQGWMKLN SFHVCITTYR LVIQDSKMFK RKKWKYLILD EAHLIKNWKS QRWQTLLNFN SKRRILLTGT PLQNDLMELW
0701: SLMHFLMPHV FQSHQEFKDW FCNPIAGMVE GQEKINKEVI DRLHNVLRPF LLRRLKRDVE KQLPSKHEHV IFCRLSKRQR NLYEDFIAST ETQATLTSGS
0801: FFGMISIIMQ LRKVCNHPDL FEGRPIVSSF DMAGIDVQLS STICSLLLES PFSKVDLEAL GFLFTHLDFS MTSWEGDEIK AISTPSELIK QRVNLKDDLE
0901: AIPLSPKNRK NLQGTNIFEE IRKAVFEERI QESKDRAAAI AWWNSLRCQR KPTYSTSLRT LLTIKGPLDD LKANCSSYMY SSILADIVLS PIERFQKMIE
1001: LVEAFTFAIP AARVPSPTCW CSKSDSPVFL SPSYKEKVTD LLSPLLSPIR PAIVRRQVYF PDRRLIQFDC GKLQELAMLL RKLKFGGHRA LIFTQMTKML
1101: DVLEAFINLY GYTYMRLDGS TPPEERQTLM QRFNTNPKIF LFILSTRSGG VGINLVGADT VIFYDSDWNP AMDQQAQDRC HRIGQTREVH IYRLISESTI
1201: EENILKKANQ KRVLDNLVIQ NGEYNTEFFK KLDPMELFSG HKALTTKDEK ETSKHCGADI PLSNADVEAA LKQAEDEADY MALKRVEQEE AVDNQEFTEE
1301: PVERPEDDEL VNEDDIKADE PADQGLVAAG PAKEEMSLLH SDIRDERAVI TTSSQEDDTD VLDDVKQMAA AAADAGQAIS SFENQLRPID RYAIRFLELW
1401: DPIIVEAAME NEAGFEEKEW ELDHIEKYKE EMEAEIDDGE EPLVYEKWDA DFATEAYRQQ VEVLAQHQLM EDLENEARER EAAEVAEMVL TQNESAHVLK
1501: PKKKKKAKKA KYKSLKKGSL AAESKHVKSV VKIEDSTDDD NEEFGYVSSS DSDMVTPLSR MHMKGKKRDL IVDTDEEKTS KKKAKKHKKS LPNSDIKYKQ
1601: TSALLDELEP SKPSDSMVVD NELKLTNRGK TVGKKFITSM PIKRVLMIKP EKLKKGNLWS RDCVPSPDSW LPQEDAILCA MVHEYGPNWN FVSGTLYGMT
1701: AGGAYRGRYR HPAYCCERYR ELIQRHILSA SDSAVNEKNL NTGSGKALLK VTEENIRTLL NVAAEQPDTE MLLQKHFSCL LSSIWRTSTR TGNDQMLSLN
1801: SPIFNRQFMG SVNHTQDLAR KPWQGMKVTS LSRKLLESAL QDSGPSQPDN TISRSRLQET QPINKLGLEL TLEFPRGNDD SLNQFPPMIS LSIDGSDSLN
1901: YVNEPPGEDV LKGSRVAAEN RYRNAANACI EDSFGWASNT FPANDLKSRT GTKAQSLGKH KLSASDSAKS TKSKHRKLLA EQLEGAWVRP NDPNLKFDFT
2001: PGDREEEEEQ EVDEKANSAE IEMISCSQWY DPFFTSGLDD CSLASDISEI E
Arabidopsis Description
PIE1Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.