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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 2
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU84199 Sorghum nucleus 92.7 94.53
TraesCS6A01G034200.2 Wheat nucleus, plastid 78.83 76.98
TraesCS6B01G048200.2 Wheat nucleus, plastid 78.64 76.97
TraesCS6D01G039800.1 Wheat nucleus, plastid 78.55 76.77
HORVU6Hr1G006050.1 Barley plastid 78.18 76.38
GSMUA_Achr1P24350_001 Banana nucleus 57.79 58.63
VIT_15s0046g02290.t01 Wine grape plastid 60.8 58.11
GSMUA_AchrUn_... Banana nucleus, plastid 59.08 57.34
GSMUA_AchrUn_... Banana nucleus 55.99 56.43
KRH48113 Soybean nucleus 57.28 55.66
KRH06623 Soybean nucleus 56.4 55.38
Solyc01g094800.2.1 Tomato nucleus 56.91 55.05
KRH00799 Soybean nucleus 55.94 54.46
Bra000409.1-P Field mustard plastid 54.42 54.44
KRH40427 Soybean nucleus 55.8 54.32
CDX95673 Canola cytosol 24.69 54.27
CDX83383 Canola nucleus, plastid 53.54 54.24
CDY37083 Canola plastid 52.8 54.15
AT2G46020.3 Thale cress plastid 54.88 54.13
CDY27338 Canola nucleus, plastid 52.57 54.04
Bra039296.1-P Field mustard plastid 53.17 53.81
CDY71637 Canola nucleus 17.34 50.68
CDX95672 Canola plastid 24.27 48.61
Zm00001d024816_P007 Maize cytosol 15.53 30.27
Zm00001d007978_P003 Maize cytosol 11.0 30.2
Zm00001d006798_P002 Maize nucleus 15.53 30.11
Zm00001d033827_P006 Maize cytosol 11.14 28.42
Zm00001d040831_P021 Maize nucleus 12.95 25.0
Zm00001d009312_P028 Maize nucleus 12.81 24.51
Zm00001d048552_P005 Maize cytosol 9.43 22.57
Zm00001d002656_P002 Maize nucleus 9.11 20.12
Zm00001d045109_P008 Maize cytosol 11.14 18.07
Zm00001d029180_P002 Maize nucleus 12.53 17.77
Zm00001d047471_P002 Maize nucleus 12.58 17.36
Zm00001d022405_P051 Maize nucleus 12.99 16.3
Zm00001d007089_P003 Maize nucleus 12.25 15.26
Zm00001d015595_P001 Maize cytosol 1.39 15.23
Zm00001d051507_P007 Maize nucleus 13.18 13.83
Zm00001d017660_P021 Maize nucleus 13.18 13.82
Zm00001d021541_P002 Maize nucleus 12.99 12.63
Zm00001d006428_P002 Maize nucleus 12.71 12.56
Zm00001d037346_P007 Maize nucleus 18.03 10.23
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300UniProt:A0A1D6GYF7ProteinID:AQK67810.1
ProteinID:AQK67827.1InterPro:BRMInterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003682GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0005829GO:GO:0006139GO:GO:0006355GO:GO:0006412GO:GO:0006950
GO:GO:0008094GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009653
GO:GO:0009987GO:GO:0010199GO:GO:0016043GO:GO:0016787GO:GO:0019538GO:GO:0040029
GO:GO:0043044GO:GO:1900036GO:GO:1903798InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_C
InterPro:IPR001487InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718
InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF08880PFscan:PS51192PFscan:PS51194
PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297SMART:SM00487SMART:SM00490
SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370SUPFAM:SSF52540UniParc:UPI00084464F1
EnsemblPlantsGene:Zm00001d014977EnsemblPlants:Zm00001d014977_P002EnsemblPlants:Zm00001d014977_T002SEG:seg::
Description
brahma1 brahma1
Coordinates
chr5:-:70822621..70833837
Molecular Weight (calculated)
242093.0 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.807
Length
2163 amino acids
Sequence
(BLAST)
0001: MMHHHEQQQA FHSGAPHGMM GPGGVNFPQS SGPVSSFQGQ RNLPLSSGGP QGMVGGQMHN QVAMQQQFLK LAMQQQQQQQ KAAQGMLLQQ QAKMNMAGSS
0101: SRDQDMLNNP AKMQELMALH QAQMYKRQCE QKEQGQSSGS EQRSGDMRPP MPPQGVPGQQ LPSMGMIRPM QPIQGQVGMG SAGGNPITPT QFQAIQAWAK
0201: EHNFDLSNPA NISAISQLLP IWQSNRMAAM QKQNEANMAA QQQQALPSQV NSDTPGHVNA PSQGALLKPR QPLAPSSISG GEEAKVVNSS NLQLQQQFPV
0301: HNRDGSNERA VRSLMTGGNG AQTTHIPQSS GHVNKIPEQP NPKNVLANSE AMQMQHVRQM QQLNQAAAPT STPIEAGGSQ VPTSAQPQTG QTGFTKNQLH
0401: VLKAQILAFR RLKRGDRLPP EVLELIVSGR PPDSQGQQQV SGPQVTHNRE RPTVSNADEH GKQMESGGKA PEKPALLKGP CLPKVEVSTS EDKASPASGP
0501: GPAQVMKASP KEPLKIGPVS VPEHCNTTVI KSEQDLERNI QRTPGRSDYN AERGKSVPAE SGSVDVEQAK RTGSTSSAPV PRDVPRKYHG PLFDFPSFTR
0601: RHDSMGSANY NSNLSLGYDV KDLLAQEGMI VLGRKREDNL KKISGLLAIN LERKRIRPDL VLRLQIEEKK LKLLEHQARL RDEVEHEQQE IMAMPDRIYR
0701: KFVRQCERQR VELVRQVQQM QRASREKQLK SIFQWRKKLL EAHWAIRDAR ITRNRGVAKY HERMLREFSK KKDDDRNKRM EALKNNDVER YRQILLEQQT
0801: SVPGDAAQRY NVLSSFLTQT EEYLYKLGGK ITATKSQQQV EEAANAAAAA ARAQGLSEEE VKAAAQCAGQ EVMIRNTFSE MNAPRDNTSV NKYYTLAHAV
0901: SERVTKQPSL LRAGTLRDYQ LVGLQWMLSL YNNKLNGILA DEMGLGKTVQ VMALVAYLME FKGNYGPHLI IVPNAVLVNW KSELLNWLPS ASCIFYVGAK
1001: DQRQKLFSQE VMAMKFNVLV TTYEFVMFDR SKLSRVDWKY IIIDEAQRMK DRDSVLARDL DRYRCQRRLL LTGTPLQNDL KELWSLLNLL LPEVFDSSKA
1101: FSDWFSKPFQ RDGPTHNEEE DDWLETEKKV IIIHRLHQIL EPFMLRRRVE DVEGSLPRKD SIVLRCRMSA VQGAIYDWIK STGTIRVDPE DEKRRAQRNP
1201: MYQVKTYKNL NNKCMELRKV CNHPLLSYPF LNHGKDFMIR SCGKLWNLDR ILIKLHKSGH RVLLFSTMTK LLDIMEDYLQ WRRLVYRRID GTTSLEDRES
1301: AIVDFNRPGS DCFIFLLSIR AAGRGLNLQS ADTVVIYDPD PNPQNEEQAV ARAHRIGQTR EVKVIYMEAV VDNISSYQKE DELRNGGSGD LEDDLAGKDR
1401: YMGSIESLIR NNIQQYKIDM ADEVINAGRF DQRTTHEERR MTLETLLHDE ERYQDSVHDV PSLQEVNRMI ARTESEVELF DQMDEDFDWT GDMTKHHQVP
1501: KWLRVNSNEV DAVVASLSKK PSRNMSSGGI ALDTNETLEK RRGRPRGTGK YSIYREIDDE DLEESDEDSE ERNTASLPEE GEVGEFEDEE DNDDSVPDNK
1601: DESEEEEPMN DDVYEFTEGL RGRKANRMEE AGSTGSSSGS RRLPPPVPSS SSKKLRSLSA LDARPGTLSK RTPDDLEEGE IAMSGDSHMD LQQSGSWNHE
1701: RDDGEDEQVL QPKIKRKRSI RLRPKPNAEK QEDRSGEGAF PQRGTHLAFQ GDGHYDSQFK SDLDARAFPA ARQQDAVHPI VKQKRNMSSR KVSPASRSGK
1801: LSHLSGSGEG SAELSKENWS SKAIDSTAPE FGGTKMSDSM QRKCKNVISK LWRRIDKEGH QMIPNISSWW RRNENSSFRG PAGSTLDLQK IEQRVDGLEY
1901: GAVTEFIADM QQMLKSVVQH FSYRHEVRIE AETLHNLFFN IMKIAFPDSD FMEAKNAMSF SNPGSGAAAA PSSSKHAAPS LKRSRASASA SASEAEQQHG
2001: SGHSSRHNQP SEAVPPSRSH SSRSERDPRH GGSRDQHLQD GAAGLLHPSD MFIVKKKRQE RARSGIGSPS SSGRGAGPLS PANPGRPGPA PSPRGARTPF
2101: QRDPPPHPSQ QSMHSAGSGW GSGGAHSDHQ AGASSSAPGI GDIQWAKPAK RLRTDRAGRG GRA
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.