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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, plastid

Predictor Summary:
  • plastid 3
  • nucleus 2
  • peroxisome 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G034200.2 Wheat nucleus, plastid 98.51 98.42
TraesCS6B01G048200.2 Wheat nucleus, plastid 97.79 97.92
HORVU6Hr1G006050.1 Barley plastid 95.26 95.21
OQU84199 Sorghum nucleus 76.55 79.87
Zm00001d014977_P002 Maize nucleus 76.77 78.55
VIT_15s0046g02290.t01 Wine grape plastid 59.65 58.33
GSMUA_AchrUn_... Banana nucleus, plastid 58.7 58.28
GSMUA_Achr1P24350_001 Banana nucleus 56.12 58.26
Solyc01g094800.2.1 Tomato nucleus 56.03 55.46
GSMUA_AchrUn_... Banana nucleus 53.73 55.41
KRH48113 Soybean nucleus 55.72 55.39
Bra000409.1-P Field mustard plastid 53.91 55.18
KRH40427 Soybean nucleus 55.31 55.09
CDX83383 Canola nucleus, plastid 53.1 55.04
KRH00799 Soybean nucleus 55.22 55.0
KRH06623 Soybean nucleus 54.63 54.88
CDY37083 Canola plastid 52.24 54.81
CDY27338 Canola nucleus, plastid 52.1 54.8
AT2G46020.3 Thale cress plastid 54.27 54.77
Bra039296.1-P Field mustard plastid 52.64 54.52
CDX95673 Canola cytosol 24.09 54.17
CDY71637 Canola nucleus 16.99 50.81
CDX95672 Canola plastid 24.63 50.46
TraesCS1D01G089200.2 Wheat nucleus 15.91 30.96
TraesCS7D01G069700.1 Wheat cytosol 10.48 29.78
TraesCS2D01G365000.1 Wheat cytosol 10.66 28.75
TraesCS4D01G053600.2 Wheat cytosol 10.85 28.74
TraesCS1D01G099600.1 Wheat nucleus 12.83 25.65
TraesCS3D01G068900.1 Wheat nucleus 12.07 23.82
TraesCS4D01G364600.1 Wheat cytosol, mitochondrion 9.4 23.58
TraesCS2D01G400400.1 Wheat cytosol 8.95 22.53
TraesCS3D01G403600.1 Wheat nucleus 11.21 20.2
TraesCS4D01G159900.1 Wheat nucleus 11.93 17.67
TraesCS7D01G148900.4 Wheat nucleus 10.94 17.22
TraesCS2D01G130900.1 Wheat nucleus 12.88 16.49
TraesCS7D01G531100.1 Wheat nucleus 12.7 12.94
TraesCS2D01G234200.1 Wheat nucleus 12.61 12.42
TraesCS7D01G206700.2 Wheat nucleus 18.03 11.85
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:BRMInterPro:Bromodomain
InterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003682GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006139
GO:GO:0006355GO:GO:0006412GO:GO:0006950GO:GO:0008094GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009628GO:GO:0009653GO:GO:0009987GO:GO:0010199GO:GO:0016043
GO:GO:0016787GO:GO:0019538GO:GO:0040029GO:GO:0043044GO:GO:1900036GO:GO:1903798
InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487InterPro:IPR001650InterPro:IPR014001
InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271
PFscan:PS51192PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297
SMART:SM00487SMART:SM00490SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370
SUPFAM:SSF52540EnsemblPlantsGene:TraesCS6D01G039800EnsemblPlants:TraesCS6D01G039800.1TIGR:cd00046TIGR:cd00079SEG:seg
Description
No Description!
Coordinates
chr6D:-:16287058..16298114
Molecular Weight (calculated)
247838.0 Da
IEP (calculated)
9.094
GRAVY (calculated)
-0.890
Length
2213 amino acids
Sequence
(BLAST)
0001: MQPGGAPSGS SPASSPRPEQ PPAPSQQQAQ HLGFARNQAM MQQQQHQQQS YQPGMPHGMM GGGGGFPQSS GPMGPFQGQR GLPQPGGPQG LVAGQQYNQS
0101: TMQQQQAYMQ FLMQQQKSHG MQLQQQQQQQ AKMNMAGPST RDQDAAANPA KMQELMSLQA QAQAQAQAQA QAQMLKRQSE HLQQAEKQPE QGQRAGSSEQ
0201: RSADMRPPMP PQGIPGQQMS SAGGMVRPMQ PMQGQVGMAS MGGIPLQAIH AWAKEQKIDL SDPANASLIS QIIPIWQSRM AAMQKQNTTN MAAQQQQQQQ
0301: QQQQQQQQQQ QQQQQQQQQQ QQNQQMLPRQ ANSDAPINGN NPGQAPLKPR QPPPPSSSVS AGAETKMANP SNLQMQQQFS AQSSNERAVR PPMTMGNAGQ
0401: MMHMTQSSGH GNKISEQPNP KNTLASSEAM QLQYARQLQQ ANRATGLTAT PGETGGSQAP TQGGRPNSNF TKHQLHVLKA QILAFRRLKR GDRTLPPEVL
0501: ELIMSPPPLP DPQTQLVSGP PVIPNRERAA SVNADEQGRP MESGDKAPEK PLLLKGPSLS KAEVSASEEK TGSASGPMQV TEVLPKEPLR ILPVSAPEQS
0601: NTAPIKSEQE PERGIQRTPG RSDYSGERGK SVPTDSGSAD AEQAKRAAST SSAPSPRDVP RKYHGPLFDF PSFTRKHDSM PPANYNGSLA LGYDMKDLLA
0701: QEGMMVLGKK REDNLKKISG LLSINLERKR IRPDLVLRLQ IEEKKLKLLE RQARMRDEVE EVQQEIMAMP DRIYRKFVKQ CERQRVELIR QVQQMQKASR
0801: EKQLKSIFQW RKKLLEAHWA IRDARITRNR GVAKYHERML REFSKKKDDD RSKRMEALKN NDVERYRQIL LEQQTSVPGD AAQRYNVLSS FLSQTEEYLY
0901: KLGGKITATK NQQQVEEAAN AAAAAARAQG LSEEEVKAAA QCAGQEVMIR NTFSEMNAPR EENASVNKYY MLAHAVTEKV TKQPSLLRLG TLRDYQLVGL
1001: QWMLSLYNNK LNGILADEMG LGKTVQVMAL IAYLMEFKGN YGPHLIIVPN AVLVNWKSEL LNWLPSASCI FYVGAKDQRQ KLFSQEVLAV KFNVLVTTYE
1101: FVMFDRSKLS RIDWKYIIID EAQRMKDRES VLARDLDRYR CQRRLLLTGT PLQNDLKELW SLLNLLLPEV FDNRKAFQDW FSKPFQRDAP TPNEEDDWLE
1201: TEKKVIIIHR LHQILEPFML RRRVEDVEGS LPRKDSIVLR CKMSAIQGAI YDWIKSTGTI RVDPEDEKIR IQRNPMYQAK TYKNLQNKCM ELRKVCNHPL
1301: LSYPFMNYYG KDFIIRSCGK LWNLDRILIK LHRSGHRVLL FSTMTKLLDI LEDYLQWRQL AYRRIDGTTS LEDRESAIVD FNRPGSECFI FLLSIRAAGR
1401: GLNLQSADTV VIYDPDPNPQ NEEQAVARAH RIGQTREVKV IYMEAVVDNI SSYHKEDELR NGGSGDLEDD LAGKDRYMGS IESLIRNNIQ QYKIDMADEV
1501: INAGRFDQRT THEERRMTLE TLLHDEERYQ ESLHDVPSLQ EVNRMIARTE EEVELFDQMD EEFDWTGDMM KHNQVPKWLR VGSTDVDCVV ASLTKKPARN
1601: ASGSAPDNGD KLEKRRGRPT GSGKYSIYRE YEDEDDEESE EDDEERNTPS HPEEEAGESE EEEENDDSVP DDDNKDQSEE EEPNNDDRYD LQQGTGSGKG
1701: HKSEEAGSTG SSSGSRRLPP PAPSSSLKKL RSLSALDSRP GTFSKRTSDD LEDGEIALSG DSHMDLQQSG SWNHDRDDGE DEQVLQPKIK RKRSLRTRPR
1801: LSTDKQEDRS GADGTFPQRG ARLLFPGDGD YDSQQDAHAL ADPTSRQQDT VHPVVKQKRN MPSVKASPAS RAAKSTHLSG SGEGSAEHSK QNWSNKVINS
1901: AGTKMSDSMQ RKCKNVISKL WRRIGKEGHQ KIPNIASWWR RNENSSSKGV AGSTLDLQKI ELRVDGLEYS GVAEFIADMQ QMLKSVVQHF GYRHEVRVEA
2001: EILHNLFFNI MKIAFPDSDF QEVKDSLSFS NPGGGASSTA VPSAKHLASG LKRRSTTTEA EQHGPGSGKH SHHASAGEAP SRAKPDRDSR HSGPGGRDQS
2101: LDSPGLPLHP GDLFIAKKKR QERARSSIGS PSSSGPRGPL SPTNTGRLGP APSPRGARTP FQRDSHPSQQ SMPGWGAHSD RGGSSPPGIG DIHWAKPAKR
2201: QRTDTGKRRP SHL
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.