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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana nucleus, plastid 78.71 75.28
GSMUA_AchrUn_... Banana nucleus 64.73 64.31
OQU84199 Sorghum nucleus 59.01 59.31
VIT_15s0046g02290.t01 Wine grape plastid 61.96 58.37
Zm00001d014977_P002 Maize nucleus 58.63 57.79
TraesCS6D01G039800.1 Wheat nucleus, plastid 58.26 56.12
TraesCS6B01G048200.2 Wheat nucleus, plastid 58.16 56.11
HORVU6Hr1G006050.1 Barley plastid 58.11 55.96
TraesCS6A01G034200.2 Wheat nucleus, plastid 58.07 55.89
KRH48113 Soybean nucleus 58.3 55.84
KRH06623 Soybean nucleus 57.41 55.56
KRH40427 Soybean nucleus 57.46 55.13
KRH00799 Soybean nucleus 57.36 55.04
Bra000409.1-P Field mustard plastid 55.02 54.26
AT2G46020.3 Thale cress plastid 55.58 54.04
CDX83383 Canola nucleus, plastid 54.08 54.0
CDX95673 Canola cytosol 24.67 53.46
Solyc01g094800.2.1 Tomato nucleus 55.82 53.22
Bra039296.1-P Field mustard plastid 53.28 53.16
CDY37083 Canola plastid 52.44 53.01
CDY27338 Canola nucleus, plastid 52.25 52.95
CDY71637 Canola nucleus 17.64 50.81
CDX95672 Canola plastid 24.34 48.06
GSMUA_AchrUn_... Banana cytosol 7.22 31.75
GSMUA_Achr3P26090_001 Banana cytosol 10.69 30.04
GSMUA_Achr3P23910_001 Banana nucleus 12.85 25.63
GSMUA_Achr8P09960_001 Banana nucleus 12.85 25.35
GSMUA_Achr6P02430_001 Banana cytosol 10.65 25.14
GSMUA_Achr4P25930_001 Banana cytosol 8.91 23.54
GSMUA_Achr6P20210_001 Banana nucleus 16.09 23.4
GSMUA_Achr8P06840_001 Banana nucleus 14.35 22.17
GSMUA_Achr8P00120_001 Banana nucleus 12.2 17.78
GSMUA_Achr8P29610_001 Banana nucleus 13.46 17.08
GSMUA_Achr4P21270_001 Banana cytosol 10.88 16.82
GSMUA_AchrUn_... Banana cytosol, nucleus 2.02 12.95
GSMUA_Achr9P11210_001 Banana nucleus 12.15 12.59
GSMUA_Achr6P29570_001 Banana nucleus 12.05 12.0
GSMUA_Achr3P26510_001 Banana nucleus 8.82 11.55
Protein Annotations
Gene3D:1.20.920.10Gene3D:3.40.50.300MapMan:35.1InterPro:BRMInterPro:BromodomainInterPro:Bromodomain-like_sf
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008094GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016043GO:GO:0016787GO:GO:0040029GO:GO:0043044EnsemblPlantsGene:GSMUA_Achr1G24350_001EnsemblPlants:GSMUA_Achr1P24350_001
EnsemblPlants:GSMUA_Achr1T24350_001InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487InterPro:IPR001650
InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427UniProt:M0S2P2InterPro:P-loop_NTPasePFAM:PF00176
PFAM:PF00271PFAM:PF00439PFAM:PF08880PFscan:PS50014PFscan:PS51192PFscan:PS51194
PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297SMART:SM00487SMART:SM00490
SMART:SM00951InterPro:SNF2_NSUPFAM:SSF47370SUPFAM:SSF52540UniParc:UPI0002947FE8SEG:seg
Description
ATP-dependent helicase BRM [Source:GMGC_GENE;Acc:GSMUA_Achr1G24350_001]
Coordinates
chr1:-:18696351..18709289
Molecular Weight (calculated)
240828.0 Da
IEP (calculated)
9.158
GRAVY (calculated)
-0.668
Length
2132 amino acids
Sequence
(BLAST)
0001: MQNSIHQAYF QFALQAAQQK AHGNSVVQQQ GKMNMVGSSG RDQDIFMNRL KMQELMSLQA VNKSQMPMLN RPAEQFTHAE KQMEPGCTST DQRIDQKPFL
0101: ADGQLASANM VRPMQPLQLL QSQSSLQNLA SNQLEMAQVQ AMQAWAKEHN IDLSVPANLN LIAQVLPFWQ SNRMSVMQKP TESNTTAQKS CLPSSKQLVM
0201: PSPVGSENSA HGNSTSDLSG QRGSIKCHQT VPSTSISNGG DTTGLNTNTL QMQQQVADYS RINQNERVVR PTIITSSCGL VNHLPNSCGS MNQPVDKSNA
0301: KNAFMGNELQ QMQNLRPLQK INRSNILPTV PGNSTVGCQI PTESGFAQTP NHHVGFTKQQ LYVLKAQILA FRRLKRGERS LPPEVLQAIS DPPVDSQPQH
0401: WPVQSGTVNQ DLMRIAKSND NEHKRCVESN DQAEQSAPVN KGRIHLKEES ITGEEKAALA SQMQGATSLE KGSVCLGSIG KLEESNTTVK SEQEVERGSQ
0501: NLSTDKVKAV PVDGAVPVPG QLKKPASTSS TAPPRDGVSR KYHGPLFDFP SFTRKHDSLG SSTTNNSTNL TLAYDVKDLL FEEGKIVLDK KRAEKLKKIS
0601: RLLAINLDRK RIKPDLVIRL QIEERKTKLL DFQARLRDEV ERQQQEIMAM PDRPYRKFVR QCEQQRLELI RQVQQLQKAS REKQLKSTFQ WRKKLLEAHW
0701: AIRDARTTRN RGIAKYHERM LKEFSKRKDE DRNKRMEALK NNDMDRYREM LLEQQTNISG DASQRYAVLS SFVSQTEEYL HKLGGKITAS KSHQEVEEAA
0801: NVAAAAARAQ GLSTEEVRAA AACAGEEVMI RNRFSEMNAL KESSANKIVI VRYYNLAHAV TERVIRQPSM LRAGTLRDYQ LVGLQWMLSL YNNKLNGILA
0901: DEMGLGKTVQ VMALIAYLME FKTNYGPHLI IVPNAVLVNW KSELLNWLPS ISCIFYVGGK DERSKLFSQL ISLATNNPNI LIRCSLSLLK YVLTYSCKTA
1001: LTYGPPFSAD PKFFFLENYS EEVCSVKFNV LVTTYEFIMY DRSKLSKIDW KYIIIDEAQR MKDRESVLAR DLDRYRCQRR LLLTGTPLQN DLKELWSLLN
1101: LLLPEVFDNR RAFHDWFSKP FQKDGTPHNQ EDEWLETEKK VIIIHRLHRI LEPFMLRRRV EDVEGSLPRK VSVVLRCRMS AIQGAIYDWI KSTGTIRNLN
1201: NKCMELRKAC NHPLLNYPYF SNYSKDFIVR SCGKLWILDR ILIKLQRAGH RVLLFSTMTK LLDILEEYLQ WRRLIYRRID GTTSLEDREA AIVDFNHPDS
1301: DCFIFLLSIR AAGRGLNLQT ADTVVIYDPD PNPQNEEQAV ARAHRIGQKR EVKVIYMEAV SLIRNNIQQY KIDMADEVIN AGRFDQRTTH EERRMTLEML
1401: LHDEERYQEN VHNVPSLQEV NRLIARSKEE VGLFDQMDED FDWTADMVKH NEVPVWLRAS TGEVDAVAAS LSKKPSKNIL SVNIGLEPSA NFSGSSPSKA
1501: ERRGRPKGPT AQKYPIYQEQ DDEDGEESDI DSEERNASEE DGEIGEFDDE ESNGADMMLL NHKDQVVEGM DCDNGRYEFS RTMDGSQNVN KLEEAGSTGS
1601: SSGSRKLPQS ETPSLSSQKF GSLSALDARP CLSSKKRSEE LEEGEIAVSG NSHMDLQQSG SWHHDHDDGE DEQVLQPKIK RKRSMRIRPK YAAERNDERS
1701: SSERIFAQRS PRLPLHVDHD YGVPSRTENP EAFAEAGLGK NDTSSSLLKQ RHNVPSRKIS PLQKSGRLSY FCGSAEDGNE YSRESWSSRA NSSCGPTSVG
1801: AKMSDITQRK CKNVISKLQR KIHKDGNQIV PTLSDWWRRN GNSSLAIPLA ARSSPLDLQI IEQRVDNLDY NGVTDFIADV QLMLKSIVQH CNYTHEVKCE
1901: AEKLQGLFFE IMKIAFPDSD FREARNAVTF SSPRGAVMTK SPKPASSSKI KQQTPTSKLE TMSFPDKALP HGVTPVDGEG TTKSTSSKHR KESRLVSGGW
2001: KEQTPECSQL LTHPGDLVIC KKKRKEREKS AVKHRLGLAS PSNLGRMGPI SPPSSGCGGS APSPTMNRSS SFPSQRDSRP AQQAKHPLSW RHREMQQLDD
2101: GNSGLHSIGD VQWAKPVKRM RTDTSKRRPS HT
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.