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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P29570_001 Banana nucleus 66.62 64.01
CDY67658 Canola cytosol, nucleus 27.41 49.96
VIT_01s0011g01480.t01 Wine grape nucleus 49.81 47.52
CDY68094 Canola nucleus 28.43 46.91
KRH42374 Soybean nucleus 45.72 43.48
KRH58495 Soybean nucleus 47.81 42.14
Zm00001d006428_P002 Maize nucleus 44.02 41.37
Zm00001d021541_P002 Maize nucleus 44.56 41.21
KXG36264 Sorghum nucleus 44.46 41.14
Os07t0497100-01 Rice nucleus 44.46 40.5
TraesCS2B01G251900.1 Wheat nucleus 43.68 40.12
TraesCS2A01G227900.1 Wheat nucleus 43.59 39.96
AT5G44800.1 Thale cress nucleus 43.05 39.86
TraesCS2D01G234200.1 Wheat nucleus 43.49 39.83
Solyc02g068560.2.1 Tomato nucleus 45.92 39.66
Bra027574.1-P Field mustard nucleus 42.71 39.56
GSMUA_AchrUn_... Banana cytosol 6.51 27.63
GSMUA_Achr3P26090_001 Banana cytosol 9.14 24.77
GSMUA_Achr8P09960_001 Banana nucleus 11.9 22.66
GSMUA_Achr3P23910_001 Banana nucleus 11.76 22.64
GSMUA_Achr4P21270_001 Banana cytosol 14.97 22.34
GSMUA_Achr4P25930_001 Banana cytosol 8.11 20.69
GSMUA_Achr8P29610_001 Banana nucleus 14.72 18.04
GSMUA_AchrUn_... Banana cytosol, nucleus 2.62 16.27
GSMUA_Achr6P20210_001 Banana nucleus 10.88 15.28
GSMUA_Achr8P00120_001 Banana nucleus 10.74 15.12
GSMUA_Achr8P06840_001 Banana nucleus 9.82 14.64
GSMUA_Achr6P02430_001 Banana cytosol 6.12 13.95
GSMUA_Achr3P26510_001 Banana nucleus 9.62 12.17
GSMUA_Achr1P24350_001 Banana nucleus 12.59 12.15
GSMUA_AchrUn_... Banana nucleus, plastid 12.54 11.57
GSMUA_AchrUn_... Banana nucleus 11.37 10.9
Protein Annotations
Gene3D:1.10.10.60Gene3D:2.40.50.40Gene3D:3.30.40.10Gene3D:3.40.50.10810Gene3D:3.40.50.300MapMan:35.1
InterPro:Chromo-like_dom_sfInterPro:Chromo/chromo_shadow_domInterPro:Chromo_domainInterPro:DUF1087GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005524GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr9G11210_001
EnsemblPlants:GSMUA_Achr9P11210_001EnsemblPlants:GSMUA_Achr9T11210_001InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:Homeobox-like_sfInterPro:IPR000953
InterPro:IPR001650InterPro:IPR013083InterPro:IPR014001InterPro:IPR017877InterPro:IPR019787InterPro:IPR038718
UniProt:M0TZD0InterPro:Myb-like_domInterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00385PFAM:PF06465
ScanProsite:PS01359PFscan:PS50013PFscan:PS50016PFscan:PS50090PFscan:PS51192PFscan:PS51194
PANTHER:PTHR10799PANTHER:PTHR10799:SF939SMART:SM00249SMART:SM00487SMART:SM00490SMART:SM01147
InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF46689SUPFAM:SSF52540SUPFAM:SSF54160SUPFAM:SSF57903
UniParc:UPI000294C496InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
CHR4/MI-2-LIKE, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G11210_001]
Coordinates
chr9:-:7289358..7303412
Molecular Weight (calculated)
230599.0 Da
IEP (calculated)
7.679
GRAVY (calculated)
-0.590
Length
2058 amino acids
Sequence
(BLAST)
0001: MREESSLCDD MIDRNWVLKR KRKRITSGVN LLNGKEGTSL SSESLLKSTS VKRKLKGDID KIKGHDGHYF ECAVCDLGGN LLCCDSCPQT YHLECLTPPL
0101: KCTPPGKWHC PSCSDHKDNV KTPSNAEAYL RRARTKTMFE KSTIVHKQTI NDKASLSERN FIPENNKGKT TFSPESKIKK KSEFSFHWKT SSRKEAHSLV
0201: KSLKSDHSKN FPEESSDKYK RDVQRKKLIV PFALPTQKAR KKKQKLSRRD KKKRSRTEKG KDVATAVSNE LSTENCFETS GSPKKCESFD QWISASKKED
0301: KTLKYDSEEQ YEVCSKAFLR SSLTNSSFGN IHTFDHGKLE TIILVIQLQS LLSLIHVDRI LGCRVQPNTT MSSQTIRSAT HQEYANSEIN SGCLAIGQAS
0401: YGIIDPQNSS KLLVQCQNGS KVETKDTESA LKDGFDGEAN LVSEEKNVCH KAAVCEAHNG QCETKGFSEN AVSATECSQD GFITKKKNNV ESRTTEEMIQ
0501: DSETKNNNVV YEFLVKWEQW KKPLRVIALR ACKDGLKEAL VKWCGLPYDE CTWERLDESI INESAHLLEA LNWLRKCWRK SKNVILADEM GLGKTISACA
0601: FISSLYSEFK AKLPCLVLVP LSTMPNWMAD KSDKSTKLYK FNVLLTTYEM VLADTSHLRG VPWEVLIVDE GHRLKNSSSK LFGLLNTFSF QHRVLLTGTP
0701: LQNNIGEMYN LLNFLQPVSF PSLSAFEEKF DDLTTAEKVE ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYLEFLHEMR IKASAKLTLL
0801: HSMLKILYKE GHRVLIFSQM TKLLDILEDY LAIEFGPKTF ERVDGSVSVA NRQAAIARFN QDKSRFVFLL STRSCGLGIN LATADTVIIY DSDFNPHADI
0901: QAMNRAHRIG QSKRLLVYRL VVRASVEERI LQLAKKKLML DQLFVNKSGS QKEVEDILRW GTEELFNDSE GVNGQDLKEA STSKLDAGCT KILWDENAIQ
1001: KLLDRSDLQS VPENTDVDLE NDMLGTVKSV DWNDDTNEEP DGTDLLSGIA GDGSEQKSEA KEDNAAGGTE ENEWDRLLRV RWEKYQLEEE AALGRGKRLR
1101: KAVSYKETFA SIPSETFSES GNEEEEPEHE YTPAGRALKE KFARLRARQK ERIAQRQTAE LSNMIDKTEL PNESLVQSVN EMEGLAKKNH DNKNDQVVAI
1201: NLEDNRPSQQ LDGNRSESFA RFGKFSKHGY KRFHSDHLDL SVRPPENLSP DIFLPSHQLQ SANIASSMPS SSLLPVLGLY APNANQVGLS SRNFRAPLRQ
1301: PISSSEQRQI NRGNVEYLFP SASSSRPSSD PSVEVREKSA STSTLPEASG YSLNHKLKNM IPDSYFPFCT PAPTSGRPPL DALENSGSSF ASFQEKLGLP
1401: NLILDDKLVP KFPLPSKSLM KQHVDLLPSL SLGMEFVNDT FQEFPDMPVL PNFKQQPSDS LKQKQQMTEL PSMHGLGHVQ GTYSSLPENH QMVLDNIMMR
1501: SQSATNKLFK KRLKVDAWSE DELDSLWIGV RRHGRGNWDA MLRDPILKFS KYRTAEDLSL RWKEEQQKIM DVPAFSAPKS SKSLSFPGIS DGMMTRALLG
1601: SKFSGLGSER PKSLSHLTDI HLGCGDFKSS FPCIDPFGQV SRIDENFPQV VAWQHERLRP NYTGDLSAGA FNRLDNVSLP FDHPCQGNLA TSLSVNLQKN
1701: EDEYHAKKNH PVPVVPDKQL NLLHNSSCNV NPKESNMGIP LIPQKKQVFP NFSSNNDIAL GSSNTDKLPH WLREAVNIPS SRPSEREVPL MLPPAVSAIA
1801: QSVRLLYGEE KTFPPFAIPG PLPIQPKDPR KSLKRKKKLN KLRQLTPDIG CATKNFDHGA SSSIPPAPEI MEFVPDPGKS DLSENLTQNL NLNSPSSSLF
1901: VTQGKSSVSA LAPSPEVLPL VTSCMPSGPS ELLITDMPGP SCQVAEISES NDLVFKQDKE VLNGDKKDIH GKQKIHENSL LGCWDTMLSS EKIDQVDDGD
2001: LSKTHSDTSK SNQVKVEEMS SEETILSSTL TPTSAWVHRS MPATPSPASP PAHPSLPR
Best Arabidopsis Sequence Match ( AT5G44800.1 )
(BLAST)
0001: MKDSGSEMIK RDWVMKQKRR KLPSILDILD QKVDSSMAFD SPEYTSSSKP SKQRLKTDST PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
Arabidopsis Description
CHR4PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.