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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P11210_001 Banana nucleus 64.01 66.62
VIT_01s0011g01480.t01 Wine grape nucleus 46.45 46.13
CDY67658 Canola cytosol, nucleus 24.14 45.79
KRH42374 Soybean nucleus 43.6 43.16
CDY68094 Canola nucleus 24.93 42.82
KRH58495 Soybean nucleus 45.52 41.76
KXG36264 Sorghum nucleus 42.9 41.32
Os07t0497100-01 Rice nucleus 43.56 41.3
Zm00001d006428_P002 Maize nucleus 42.2 41.28
Zm00001d021541_P002 Maize nucleus 42.62 41.03
TraesCS2B01G251900.1 Wheat nucleus 42.2 40.34
TraesCS2D01G234200.1 Wheat nucleus 42.11 40.14
TraesCS2A01G227900.1 Wheat nucleus 41.97 40.04
Solyc02g068560.2.1 Tomato nucleus 43.56 39.15
Bra027574.1-P Field mustard nucleus 40.43 38.97
AT5G44800.1 Thale cress nucleus 40.34 38.87
GSMUA_AchrUn_... Banana cytosol 5.93 26.19
GSMUA_Achr3P26090_001 Banana cytosol 8.22 23.19
GSMUA_Achr4P21270_001 Banana cytosol 14.38 22.34
GSMUA_Achr3P23910_001 Banana nucleus 11.11 22.26
GSMUA_Achr8P09960_001 Banana nucleus 11.11 22.02
GSMUA_Achr4P25930_001 Banana cytosol 7.8 20.69
GSMUA_Achr8P29610_001 Banana nucleus 14.05 17.92
GSMUA_AchrUn_... Banana cytosol, nucleus 2.57 16.57
GSMUA_Achr6P20210_001 Banana nucleus 10.69 15.62
GSMUA_Achr8P00120_001 Banana nucleus 10.6 15.53
GSMUA_Achr8P06840_001 Banana nucleus 9.66 15.0
GSMUA_Achr6P02430_001 Banana cytosol 5.51 13.07
GSMUA_Achr3P26510_001 Banana nucleus 9.48 12.48
GSMUA_Achr1P24350_001 Banana nucleus 12.0 12.05
GSMUA_AchrUn_... Banana nucleus 11.58 11.56
GSMUA_AchrUn_... Banana nucleus, plastid 12.0 11.53
Protein Annotations
Gene3D:1.10.10.60Gene3D:2.40.50.40Gene3D:3.30.40.10Gene3D:3.40.50.10810Gene3D:3.40.50.300MapMan:35.1
InterPro:Chromo-like_dom_sfInterPro:Chromo/chromo_shadow_domInterPro:Chromo_domainInterPro:DUF1087GO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr6G29570_001EnsemblPlants:GSMUA_Achr6P29570_001EnsemblPlants:GSMUA_Achr6T29570_001
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:Homeobox-like_sfInterPro:IPR000953InterPro:IPR001650InterPro:IPR013083
InterPro:IPR014001InterPro:IPR017877InterPro:IPR019787InterPro:IPR038718UniProt:M0TBA2InterPro:Myb-like_dom
InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF00385PFAM:PF00628ScanProsite:PS01359
PFscan:PS50013PFscan:PS50016PFscan:PS50090PFscan:PS51192PFscan:PS51194PANTHER:PTHR10799
PANTHER:PTHR10799:SF939SMART:SM00249SMART:SM00298SMART:SM00487SMART:SM00490SMART:SM01147
InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF46689SUPFAM:SSF52540SUPFAM:SSF54160SUPFAM:SSF57903
UniParc:UPI000294C077InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
CHR4/MI-2-LIKE, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G29570_001]
Coordinates
chr6:-:29777037..29802183
Molecular Weight (calculated)
240224.0 Da
IEP (calculated)
7.879
GRAVY (calculated)
-0.696
Length
2142 amino acids
Sequence
(BLAST)
0001: MREESSSRDN MIDRNWLLKR KRKRITSGLG LSNGKESTSR SSESLLNNAA KRKKGDIHVS RLARKIKGQD GHYFECVVCD LGGNLLCCDS CPRTYHLECL
0101: TPPLKRIPSG KWHCRNCSEQ KANIKTSDNS EPYLRRARMK SMFGKPTILY KQPVHDKATL PERNSVPRTN NGKATFSRRT PNQKSDSSRY DKSVSPKSSH
0201: LCEGGPQDGI LAATDNKTKK SDSSFRRKTS SHEKSRKKKQ KPSMTDKKKK PIAKKGKDAS TAVSNEPSME TCLSTGGSLQ NCKSLDQQNS ASKEEASSSA
0301: GEEQYEISTE KASRSSQELD ERSMQAHKIT KHHGNHWDGV QQVDRILGCR LQASTKMSSQ TIRSPTSSEL ADSENNPGSP ASRQPPYGLN GPRNNDKLLT
0401: ECQNQCEVEI KDTKRVLTEA YNDKSCESKG SLNNIPTSEC LQDEHITKEN FVVLKDSPLD KANIALEVCM ENSKDSDLIS AHKQSNSYTE TGPSQLAVSC
0501: VSNGDDGSVL DTQPSNNDKS RITVEMVQDS GNENNDDIIY EFLVKWVGQS NTHNTWVPES QLKILAKRKL ENYKAKYGTA IINICEEQWK IPQRVISLRT
0601: CKDGINEALV KWCGLPYDEC TWERLDEPVM KESAHRQPNV LKGGLLFPHQ LEALNWLRKC WFKNKNVILA DEMGLGKTIS ACAFISSLYF EFKAKLPSLI
0701: LVPLSTMPNW LAEFALWAPR LNVLSKSYKF NVLIVDEGHR LKNSSSKLFG LLNTFSFRHR VLLTGTPLQN NIGELYNLLN FLQPVAFPSL AAFEEKLKKD
0801: AMQNIPPKTE RIIPVELTSI QAEYYRAMLT KNYQILRNIG KAKLTLLHSM LKILHKEGHR VLIFSQMSKL LDILEDYLTI EFGPKTYERV DGSVPVADRQ
0901: AAIARFNQDK TRFVFLLSTR SCGLGINLAT ADTVIIYDSD FNPHADIQAM NRAHRIGQSK RLLVYRLVVR ASVEERILHL AKKKLMLDQL FVNKSESQKE
1001: VEDILRWGAG ELFSDSDAVN GQDAKEAPTS KLDAGCTKIV WDEGAILKLL DRSDLQSVSE STDVDLENNM LGSVKSVDWN DDTNEEPDGS QLLPGVAVDG
1101: CEKISEAKED TAVGGSEENE WDRLLRVRSY SKYDNQTLYL YVVHRWEKYQ LEEEAVLGRG KRLRKAVSYK ESFASIPSET ISESGNEEEE PEHEYTHAGR
1201: ALKEKFARLR ARQKERIAQR QTADFSHSTD RTELLTQSMV QSVHEAEGLE KKIQDDNNEQ VVTIDQEDDT STQPLDDKRT ESPARLGKFL KHGYKRFHSD
1301: HLDLSVRPPG SLSADFFLPR NQLQSTNNAV SLPSNNLLPV LGLCAPNASQ AGSSSRNFRS PLRLSTSSNG QRRISSRNVE CPLPAASCSR PPNDMNIELK
1401: EKSASTSILP EASGDSLHHK LKNMIPDGYF PFYPPASTSG RPPLDIFETS SSSFTSFQEK LGLPNLTFDV NMAPKFSIPP KNLMKPHSDL LPSLSLTMEY
1501: INSSFQELPN MPVLPNFRQQ LSDSLKQKQQ MTELKSRLDI GPMPGTRSSL PENHQKVLDN IMMRTQSATN KLFKKRLKAD AWSEDELDAL WIGVRRHGRG
1601: NWDAMLRDPK LRFSKYRTIE DLFLRWTEEQ QKIIDTPAFS APKSSKPLSF PEISDGMMTR ALLGGQLPGL GSAWPKSFSD LTDIQLGCGD FKSSFSCTDP
1701: FSHNSRIDEN CPQVAAWKND RPRSGFHGGF YPGVSLPFDM PCSDNLVTSL SMNHPSSSAL QQNEDENCAM KNFPLPGVSE KLQNLLHDSI SKVHSNESNV
1801: GMTLDPHKQQ TFLDSSSNNS IAFGSSNTNK LPHWLREAVN IPPSRPPEPE LCSTLPPTVS AIAQSVRLLY GEEKTFPPFA IPDLPPIQPQ DPRKSLKRKR
1901: KLDRLQQLTP DIDGFIEKFD HSSPGTIPPV SQIMESAPDL GRSDLNEDFT SQNLNLNSPT LSSFATQEKS SGSALAACPE VLEQVKSCMS CGPCGLSVTE
2001: MPGPSCQRTE MSKSKDLEIF KHDRKGLNED LEDGHGKHKT ARNSLLGCWD KMLSTEQTSQ ADNRDSSKTQ SDTSRPNQMN LKEMSSEETV SDNNKSEHEH
2101: RENGLEMSKL LIRGYEGRFV SCKSSFYLCM GENGDDKSWR KH
Best Arabidopsis Sequence Match ( AT5G44800.1 )
(BLAST)
0001: MKDSGSEMIK RDWVMKQKRR KLPSILDILD QKVDSSMAFD SPEYTSSSKP SKQRLKTDST PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
Arabidopsis Description
CHR4PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.