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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P24350_001 Banana nucleus 75.28 78.71
GSMUA_AchrUn_... Banana nucleus 64.87 67.38
VIT_15s0046g02290.t01 Wine grape plastid 62.94 62.0
OQU84199 Sorghum nucleus 57.47 60.4
Zm00001d014977_P002 Maize nucleus 57.34 59.08
KRH48113 Soybean nucleus 58.77 58.85
KRH40427 Soybean nucleus 58.59 58.78
KRH00799 Soybean nucleus 58.55 58.73
TraesCS6D01G039800.1 Wheat nucleus, plastid 58.28 58.7
TraesCS6B01G048200.2 Wheat nucleus, plastid 58.1 58.6
KRH06623 Soybean nucleus 57.87 58.56
TraesCS6A01G034200.2 Wheat nucleus, plastid 58.14 58.51
HORVU6Hr1G006050.1 Barley plastid 57.96 58.36
Bra000409.1-P Field mustard plastid 55.59 57.31
CDX83383 Canola nucleus, plastid 54.73 57.14
AT2G46020.3 Thale cress plastid 56.21 57.14
Solyc01g094800.2.1 Tomato nucleus 56.66 56.48
CDY37083 Canola plastid 53.12 56.14
CDY27338 Canola nucleus, plastid 52.89 56.04
Bra039296.1-P Field mustard plastid 53.7 56.01
CDX95673 Canola cytosol 24.67 55.89
CDX95672 Canola plastid 25.39 52.41
CDY71637 Canola nucleus 17.09 51.49
GSMUA_AchrUn_... Banana cytosol 6.91 31.75
GSMUA_Achr3P26090_001 Banana cytosol 10.14 29.78
GSMUA_Achr3P23910_001 Banana nucleus 12.7 26.47
GSMUA_Achr8P09960_001 Banana nucleus 12.79 26.36
GSMUA_Achr6P02430_001 Banana cytosol 10.45 25.8
GSMUA_Achr6P20210_001 Banana nucleus 15.61 23.74
GSMUA_Achr4P25930_001 Banana cytosol 8.57 23.67
GSMUA_Achr8P06840_001 Banana nucleus 13.86 22.39
GSMUA_Achr8P00120_001 Banana nucleus 11.98 18.26
GSMUA_Achr4P21270_001 Banana cytosol 10.72 17.33
GSMUA_Achr8P29610_001 Banana nucleus 12.97 17.2
GSMUA_AchrUn_... Banana cytosol, nucleus 2.02 13.55
GSMUA_Achr9P11210_001 Banana nucleus 11.57 12.54
GSMUA_Achr3P26510_001 Banana nucleus 8.93 12.23
GSMUA_Achr6P29570_001 Banana nucleus 11.53 12.0
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:BRMInterPro:Bromodomain
InterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008094GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0040029GO:GO:0043044EnsemblPlantsGene:GSMUA_AchrUn_randomG07690_001
EnsemblPlants:GSMUA_AchrUn_randomP07690_001EnsemblPlants:GSMUA_AchrUn_randomT07690_001InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487
InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718UniProt:M0U780
InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF00439PFAM:PF08880PFscan:PS50014
PFscan:PS51192PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297
SMART:SM00487SMART:SM00490SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370
SUPFAM:SSF52540UniParc:UPI0002960D16SEG:seg:::
Description
ATP-dependent helicase BRM [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07690_001]
Coordinates
chrchrUn_random:+:32596497..32621367
Molecular Weight (calculated)
251579.0 Da
IEP (calculated)
9.107
GRAVY (calculated)
-0.728
Length
2229 amino acids
Sequence
(BLAST)
0001: MQSGNVRNPA ATPPPGRSPP SSAASPSSSS SAVSAPNHLG FESLQHQQQQ LAYRQALQQQ EHQQKLQQLR KSEVDKSLLT YQSTSTHGPT SGTGFPTTPG
0101: PSHLSQLSKK YGNIPHHPGA VHVPEENENK GQGVGHQMQN PLHQAYLQFA FQAAQKSHGN SVVLQQGKMN MAGPSQRDQD MLMNKLKMQE LMSLQVVNKS
0201: QMPMLNRTAE QFTYAEKHLE LGHTSTDQRN DLKPLPADGQ LASVNMVVPG QPLQLLHSQA SVQNSANNQL EMAQVQAMQV WAKEHNIDLS VPANLSLISQ
0301: ILPFWQSNRM AVMQKPNETR PTAQQSCFPS LMQPAMPSPI GTENSANVNS PSDLPGRYSS YKCHQALPSS SLPGGGDTIG INPNTLQIQR QVAGHNRINQ
0401: NEGTVKTPIT TECGGQVTHL TNSSGNLNQT LEKSDAKNTF TGSEMQQMQN LRSLQQLDRS SFLPAVPRNG TVGTQVPSEG GFAQIAKQRI GFTKQQLHVL
0501: KAQILAFRRL KRGERSLPPE VLQAIADTPV DSQPKHGHIQ SGVNQDLVTN AKSNDNKHRR HVESNDQAQR SAPMSEGHMQ LKDESFTGEE KAASVNQMQG
0601: TAGLEREAVC KGSIGKSEDS SSIVKSDHEV EKGSQDLSSR GDYYIDKGKP VPVDGTIMVP EQLKKPASTS STTPPRDGIS RKYHGPIFDF PSFTRKHDSL
0701: GSTTANYSTN LTLAYDIKDL LFEEGKIVFN KKKVENLKKI SRLLTVNLER RRIKPDLVIR LQIEERKLKL LDLQARLRDE VEQQQQEIMA MPDRPYRKFV
0801: RQCEQQRAEL TRQVQQSQKA SREKQLKSIF QWRKKLLEAH WAIRDARTAR NRGIAKYHER MLREFSKRKD EDRNKRMEAL KNNDVDRYRE MLLEQQTNIQ
0901: GDAAQRYAVL SSFLSQTEEY LRKLGSKITA SKSHQEVEEA ANAAAAAARA QGLSSEEVRT AASCAGEEVM IRNRFSEMNA PKDSSANKYY NLAHAVSERV
1001: IRQPSMLRSG TLRDYQLVGL QWMLSLYNNK LNGILADEMG LGKTVQVMAL IAYLMEFKRN YGPHLIIVPN AVLVNWKSEL LNWLPSISCI FYVGGKEERS
1101: KLFSQEVCAV KFNVLVTTYE FIMYDRSKLS KIDWKYIIID EAQRMKDRES VLARDLDRYR CQRRLLLTGT PLQNDLKELW SLLNLLLPEV FDNRKAFHDW
1201: FSKPFQKDGP PQNQEEDEWL ETEKKVIIIH RLHQILEPFM LRRRVEDVEG SLPRKVSIVL RCRMSAIQGA IYDWIKSTGT LRNLHNRCME LRKVCNHPLL
1301: NYPYFSNYSK DFIVRSCGKL WILDRILIKL QRAGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NSPDSDCFIF LLSIRAAGRG
1401: LNLQTADTVV IYDPDPNPQN EEQAVARAHR IGQKREVKVI YMEADDLAGK DRYIGSIESL IRNNIQQYKM DMADEVINAG RFDQRTTHEE RRITLEMLLH
1501: DEERYQETVH DVPSLQEVNR MIARSEEEVE LFDQMDEDLD WTADMVKHNE VPKWLRVSSC EVEAVAANLS KKPSKNILSG NIELEPSAIF SGLSPSKTER
1601: RRGRPKSSTA KNIPIYQELD DEDAEDSDID SEERNAFEEE GEIGEFEDEE FNVADDVLPV HKDQEVEGMD YNNGAYEFSQ TMDGGQNVHA FEEADSTGSS
1701: SGSRRLPQPE TPLLVSQKFG SLSALDAKPG LPSKKMADEL EEGEIAVSGD SHMDLQQSGS WLHDHDDGED EQVLQPKIKR KRSMRMRPRC FSERTDEKSS
1801: SERIFPHHSS RLPLQVDHEY AMPARTEKLK AFAEVGLQRH VTGSSSLKHR HNVPSKKISP QQKSGRLSYF SGSAEDGNEH SRESWNGRTN SSGGPTFVGV
1901: KMSDSTQRKC KNVISKLQRR INKDGNQIVP ILSDWWRNAN SSLAIPLVVH GTLDLQIIEL RVDNLEYSGV TDFIADVQLM LKNIVRHFNY SSEVRSEAEK
2001: LRDLFFHIMK IAFPDSDFRE AKNAVTFSSP GGSVTMQPQK LPSSSKTKQQ GPTNKLETVT VRDKVVPHRA TPIGGEERTK SSSSKHQKES RSVSGSLKEQ
2101: APECSQFLTH PGDLVICKKK RKERDKSAVK QRTGSASPSN PGRMGPLSPP STGRVASAPS PTMNRSSSLS FGKDSRHARQ AKHPSVWPHR EMQQLGDGDG
2201: GRHGIGDVQW AKPVKRMRTD TGKRRPSHM
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.