Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95672 | Canola | plastid | 97.57 | 66.85 |
| CDX83383 | Canola | nucleus, plastid | 98.38 | 34.1 |
| Bra000409.1-P | Field mustard | plastid | 96.89 | 33.16 |
| CDY27338 | Canola | nucleus, plastid | 84.32 | 29.66 |
| CDY37083 | Canola | plastid | 84.32 | 29.59 |
| AT2G46020.3 | Thale cress | plastid | 86.89 | 29.32 |
| VIT_15s0046g02290.t01 | Wine grape | plastid | 63.65 | 20.81 |
| KRH06623 | Soybean | nucleus | 61.22 | 20.56 |
| KRH48113 | Soybean | nucleus | 60.41 | 20.08 |
| KRH00799 | Soybean | nucleus | 60.27 | 20.07 |
| KRH40427 | Soybean | nucleus | 60.14 | 20.03 |
| Solyc01g094800.2.1 | Tomato | nucleus | 58.24 | 19.28 |
| GSMUA_Achr1P24350_001 | Banana | nucleus | 50.81 | 17.64 |
| OQU84199 | Sorghum | nucleus | 50.41 | 17.59 |
| Zm00001d014977_P002 | Maize | nucleus | 50.68 | 17.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.73 | 17.15 |
| GSMUA_AchrUn_... | Banana | nucleus, plastid | 51.49 | 17.09 |
| TraesCS6D01G039800.1 | Wheat | nucleus, plastid | 50.81 | 16.99 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 50.81 | 16.98 |
| TraesCS6B01G048200.2 | Wheat | nucleus, plastid | 50.68 | 16.97 |
| HORVU6Hr1G006050.1 | Barley | plastid | 50.54 | 16.89 |
| CDY18840 | Canola | nucleus | 7.97 | 5.45 |
| CDY30994 | Canola | nucleus | 4.46 | 5.16 |
| CDX72050 | Canola | cytosol | 8.65 | 4.34 |
| CDX88940 | Canola | nucleus | 9.19 | 4.11 |
| CDY06115 | Canola | nucleus | 8.65 | 3.4 |
| CDY57125 | Canola | cytosol | 2.84 | 2.74 |
| CDY30755 | Canola | cytosol | 2.84 | 2.71 |
| CDX81370 | Canola | cytosol | 2.7 | 2.61 |
| CDY53848 | Canola | cytosol | 2.7 | 2.59 |
| CDY04120 | Canola | cytosol | 2.57 | 2.5 |
| CDX92595 | Canola | nucleus | 2.97 | 2.46 |
| CDY48619 | Canola | nucleus, plastid | 2.43 | 2.35 |
| CDY14410 | Canola | nucleus | 7.84 | 2.32 |
| CDY24695 | Canola | nucleus | 3.24 | 2.28 |
| CDY18857 | Canola | nucleus | 3.11 | 2.19 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 3.24 | 2.12 |
| CDY07678 | Canola | nucleus | 7.57 | 2.04 |
| CDY02609 | Canola | nucleus | 2.7 | 1.9 |
| CDY13907 | Canola | nucleus | 2.7 | 1.89 |
| CDX81444 | Canola | nucleus | 4.05 | 1.77 |
| CDY37209 | Canola | nucleus | 3.92 | 1.72 |
| CDX75208 | Canola | cytosol | 2.57 | 1.59 |
| CDX68802 | Canola | cytosol | 2.57 | 1.57 |
| CDY47176 | Canola | cytosol | 0.95 | 1.48 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 2.7 | 1.45 |
| CDY08401 | Canola | nucleus | 3.92 | 1.45 |
| CDY52874 | Canola | nucleus | 3.92 | 1.44 |
| CDY56279 | Canola | cytosol | 2.43 | 1.34 |
| CDY18960 | Canola | cytosol | 0.54 | 0.46 |
| CDX74702 | Canola | cytosol | 0.54 | 0.46 |
| CDX95673 | Canola | cytosol | 0.0 | 0.0 |
| CDY68094 | Canola | nucleus | 0.0 | 0.0 |
| CDY67658 | Canola | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | GO:A0A078K185 | UniProt:A0A078K185 | InterPro:BRM | EnsemblPlants:CDY71637 | ProteinID:CDY71637 |
| ProteinID:CDY71637.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008094 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0040029 | GO:GO:0043044 | EnsemblPlantsGene:GSBRNA2T00017770001 | InterPro:Gln-Leu-Gln_QLQ |
| InterPro:IPR014978 | PFAM:PF08880 | PFscan:PS51666 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF577 | SMART:SM00951 |
| UniParc:UPI0004EF2BBD | SEG:seg | : | : | : | : |
Description
BnaCnng73760DBnaCnng73760D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K185]
Coordinates
chrLK046738:+:2..2461
Molecular Weight (calculated)
82303.8 Da
IEP (calculated)
10.456
GRAVY (calculated)
-0.902
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: KERNKTSSSA GWNGQLMPGN IIRPMQAPQA MQGVNNMGTN QLALSQQWQA MQAWARERNI DLSHPANANQ MSHILQARMA AQQKAIEGNV ASQSPAMPVS
101: SQPVSSSALP GENSPRANSA SDLSGQSGGP AKARHANSFA STSSPRMVNP GASPFSQGRD NPMYPRHLAQ PTNGMQSGNS LQTSANDAHV PDQKKSLGSS
201: EHLQMRQPRQ LNAPTPNLAA PSDAGPLSNS SRHSGQGTQQ AQQRSGFTKQ QLHVLKAQIL AFRRLKKGEG SLPQELLKAI APPPLELQTQ RQVSPVRLQV
301: QDRSTDKTVE DQARSLESGK ESQAAASSNG QIFSKEEENL RDTEVPLAKS HSQLFQNRGK EPASIDAVTK LEQQTDVFPV KSDQGAEAST QQTPRSDSNA
401: DKGKAVASDG DQSNVPSQAN TPQQHKDTAS ARKYHGPLFD FPFFTRKHDS YGSATANANN NLTLAYDIKD LICEEGAEFF NKKRADSLKK INGLLAKNLE
501: RKRIRPDLVL RLQIEEKKLR LRDLQSRVRD EVDRQQQEIM SMPDRPYRKF VRLCERQRLE MNRQVLASQK AVREKQLKTI FQWRKKLLEA HWAIRDARTA
601: RNRGVAKYHE KMLREFSKRK DDGRNKRMEA LKNNDVERYR EMLLEQQTNI PGDAAERYAV LSSFLTQTED YLHKLGGKIT ATKNQQEVEE AANAAAVAAR
701: LQGLSEEEVR AAAACAREEV VIRNRFMEMN APKDNSSVNK
101: SQPVSSSALP GENSPRANSA SDLSGQSGGP AKARHANSFA STSSPRMVNP GASPFSQGRD NPMYPRHLAQ PTNGMQSGNS LQTSANDAHV PDQKKSLGSS
201: EHLQMRQPRQ LNAPTPNLAA PSDAGPLSNS SRHSGQGTQQ AQQRSGFTKQ QLHVLKAQIL AFRRLKKGEG SLPQELLKAI APPPLELQTQ RQVSPVRLQV
301: QDRSTDKTVE DQARSLESGK ESQAAASSNG QIFSKEEENL RDTEVPLAKS HSQLFQNRGK EPASIDAVTK LEQQTDVFPV KSDQGAEAST QQTPRSDSNA
401: DKGKAVASDG DQSNVPSQAN TPQQHKDTAS ARKYHGPLFD FPFFTRKHDS YGSATANANN NLTLAYDIKD LICEEGAEFF NKKRADSLKK INGLLAKNLE
501: RKRIRPDLVL RLQIEEKKLR LRDLQSRVRD EVDRQQQEIM SMPDRPYRKF VRLCERQRLE MNRQVLASQK AVREKQLKTI FQWRKKLLEA HWAIRDARTA
601: RNRGVAKYHE KMLREFSKRK DDGRNKRMEA LKNNDVERYR EMLLEQQTNI PGDAAERYAV LSSFLTQTED YLHKLGGKIT ATKNQQEVEE AANAAAVAAR
701: LQGLSEEEVR AAAACAREEV VIRNRFMEMN APKDNSSVNK
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF NVLVTTYEFI MYDRSKLSKV
1101: DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201: QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD
1301: FLVRSCGKLW ILDRILIKLQ RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL LSIRAAGRGL NLQTADTVVI
1401: YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501: EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG
1601: GPGGERKRGR PKSKKINYKE IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD YPPGSGSYKK NPPRDDAGSS
1701: GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801: EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ
1901: KRCKIVISKL QRRIDKEGQQ IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY GFSHEVRSEA KKVHNLFFDL
2001: LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101: KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF NVLVTTYEFI MYDRSKLSKV
1101: DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201: QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD
1301: FLVRSCGKLW ILDRILIKLQ RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL LSIRAAGRGL NLQTADTVVI
1401: YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501: EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG
1601: GPGGERKRGR PKSKKINYKE IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD YPPGSGSYKK NPPRDDAGSS
1701: GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801: EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ
1901: KRCKIVISKL QRRIDKEGQQ IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY GFSHEVRSEA KKVHNLFFDL
2001: LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101: KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.