Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007318.1-P | Field mustard | nucleus | 77.96 | 98.13 |
| CDX72050 | Canola | cytosol | 76.53 | 97.83 |
| AT3G57300.2 | Thale cress | cytosol | 66.97 | 81.88 |
| CDY30994 | Canola | nucleus | 27.4 | 80.62 |
| CDX88940 | Canola | nucleus | 68.88 | 78.42 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 53.85 | 65.13 |
| KRG95191 | Soybean | nucleus | 52.95 | 65.12 |
| KRH33202 | Soybean | nucleus | 50.19 | 64.77 |
| KRH66858 | Soybean | nucleus | 52.52 | 64.56 |
| Solyc04g016370.2.1 | Tomato | nucleus | 51.57 | 63.09 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 46.68 | 60.12 |
| OQU92590 | Sorghum | nucleus | 43.02 | 57.65 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 44.88 | 56.48 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 44.77 | 56.43 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 44.61 | 56.15 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 44.72 | 55.36 |
| Zm00001d029180_P002 | Maize | nucleus | 44.45 | 54.89 |
| Zm00001d047471_P002 | Maize | nucleus | 44.18 | 53.1 |
| CDY47176 | Canola | cytosol | 9.56 | 37.97 |
| CDY53848 | Canola | cytosol | 11.21 | 27.37 |
| CDY30755 | Canola | cytosol | 11.15 | 27.13 |
| CDX81370 | Canola | cytosol | 10.99 | 27.02 |
| CDY57125 | Canola | cytosol | 10.99 | 27.02 |
| CDY04120 | Canola | cytosol | 10.52 | 26.05 |
| CDY48619 | Canola | nucleus, plastid | 10.57 | 26.01 |
| CDX92595 | Canola | nucleus | 11.95 | 25.17 |
| CDX74702 | Canola | cytosol | 10.94 | 23.68 |
| CDY18960 | Canola | cytosol | 10.89 | 23.59 |
| CDY18857 | Canola | nucleus | 12.75 | 22.88 |
| CDY24695 | Canola | nucleus | 12.53 | 22.41 |
| CDY13907 | Canola | nucleus | 12.37 | 22.0 |
| CDY18840 | Canola | nucleus | 12.64 | 21.98 |
| CDY02609 | Canola | nucleus | 11.84 | 21.14 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 12.59 | 20.92 |
| CDX75208 | Canola | cytosol | 11.1 | 17.47 |
| CDX68802 | Canola | cytosol | 11.21 | 17.38 |
| CDY56279 | Canola | cytosol | 11.31 | 15.86 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 11.47 | 15.7 |
| CDY52874 | Canola | nucleus | 15.88 | 14.82 |
| CDY08401 | Canola | nucleus | 15.72 | 14.76 |
| CDY67658 | Canola | cytosol, nucleus | 8.34 | 13.91 |
| CDX81444 | Canola | nucleus | 12.06 | 13.41 |
| CDY37209 | Canola | nucleus | 12.0 | 13.4 |
| CDY27338 | Canola | nucleus, plastid | 14.29 | 12.79 |
| CDY37083 | Canola | plastid | 14.29 | 12.75 |
| CDY68094 | Canola | nucleus | 8.39 | 12.67 |
| CDX83383 | Canola | nucleus, plastid | 13.91 | 12.27 |
| CDX95672 | Canola | plastid | 6.16 | 10.74 |
| CDX95673 | Canola | cytosol | 5.52 | 10.57 |
| CDY14410 | Canola | nucleus | 12.64 | 9.51 |
| CDY07678 | Canola | nucleus | 12.69 | 8.7 |
| CDY71637 | Canola | nucleus | 3.4 | 8.65 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078EVQ6 | EnsemblPlants:CDY06115 | ProteinID:CDY06115 |
| ProteinID:CDY06115.1 | ncoils:Coil | InterPro:DBINO | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 |
| GO:GO:0006351 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | EnsemblPlantsGene:GSBRNA2T00121993001 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0004EF1D4A | SEG:seg | : | : | : | : |
Description
BnaA09g36650D
Coordinates
chrLK031967:-:876488..885539
Molecular Weight (calculated)
214793.0 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.678
Length
1883 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPSRRQFRD SRYANLFDLE PLMNFRIPRH EDESDYYGSS SQDETRGNQG GVVANYGNGV RRGMSSGTKK RKRWIEADDD VEEGDDHYSQ HVSEEHYRAM
0101: LGEHMQRFKS RSKESRGNHT PLMGVPVRKS NVGINRGRND HHRRFYDVDT SSNYAADAIP QRRGSYRESN VTPKIAYEPS YLDIGEGVVY KIPPSYDKLV
0201: ASLNLPSFSD IHVDDFYLKG ALDLRSLAEL MARDKRSGAR SRNGMGEPRP QYDSLQARVK ALSASSSSPN FSLKVSEDAM NSVIPEGAAG TTARTILSEG
0301: GVLQVHYVKV LEKGDTYEIV QRSLPKKVKV KNDPAVIEKT ERDKIRKAWI NIVRRDIPKH HRVFTTFHRK QSIDAKRFAD GCQREVKMKV ARSFKLPRSA
0401: PIRTRKISRD MLLFWKRFDK QMPLMNFRIP RHEDESDYYG SSSQDETRGN QGGVVANYGN GVRRGMSSGT KKRKRWTEVD DDVEDGDDHY SQHVTEEHYR
0501: AMLGEHMQRF KSRSKESRGN HTPLMGVPVR KSNVGINRGR NDHHRRFYDV DTSSNYAADA IPQRRGSYRE SNVTPKIAYE PSYLDIGEGV VYKIPPSYDK
0601: LVASLNLPSF SDIHVDDFYL KGALDLRSLA ELMARDKRSG ARSRNGMGEP RPQYDSLQAR VKALSASSSS PNFSLKVSED AMNSVIPEGA AGTTARTILS
0701: EGGVLQVHYV KVLEKGDTYE IVQRSLPKKV KVKNDPAVIE KTERDKIRKA WINIVRRDIP KHHRVFTTFH RKQSIDAKRF ADGCQREVKM KVARSFKLPR
0801: SAPIRTRKIS RDMLLFWKRF DKQMAEERKK QEKEAAEALK REQELREAQR QQQRLNFLIK QTELYSHFMQ NKTDAMPSES LPLGDENLME DPEDAKMKED
0901: ALNAAREAVS KQRKITDAFD TEYMKLQQTS DMEGPSIDVS VSGSGNIDLH NPSTMPVTST VQTPEMFKGT LKEYQMKGLQ WLVNCYEQGL NGILADEMGL
1001: GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWADEIS RFCPDLKTLP YWGGLQERTI LRKNINPKRM YRRDAGFHIL ITSYQLLVTD EKYFRRVKWQ
1101: YMVLDEAQAI KSSTSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPMVFDSHE QFNEWFSKGI ENHAEHGGTL NEHQLNRLHA ILKPFMLRRV
1201: KKDVVSELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGHFND KKILNLMNIV IQLRKASSMV CNHPELFERN EGSSYLYFGV MSNSLLPPPF
1301: GELEDVHYSG GHNPITYEIP KLLQNEMLQN SETFCSSIGK GLSRESFLKN FNIFSPEYIH RSTLPSDSSS VDQAVSGSGA FAFSRLMDLS PSEVGYLALC
1401: SVMERLLFSI LKWERQFLDE IVDSFMESMD DDLDGDNMNT AQTRAVTRML LMPSKVETSL LKGRVGTGPT CHSIESLVIS HQDRLLSSIK LLHSAYTFIP
1501: KARAPPISVH CSDRNSAYRI TEEMHQPWLK RLLIGFARTS EANGPRKPSS VPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK LLTDSGKLQT
1601: LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQQ RNDIFVFLLS TRAGGLAMDR AHRLGQTKDV TVYRLICKET
1701: VEEKILHRAS QKNTVQQLVM TGGHVQGDDV FGTADVVSLL MDDAEAAQLE QKFRELPLQV KDRQKKKQPM KRIRIDAEGD ATLEELDDAT ERQDNGQEPS
1801: QEPETTKPSN KKRKAAPTPK SRVPQKAKEE ENGEGDDTLQ PQRTKRVKRQ TKSVNESLEP VFSASVTPTN GEFNPSSSNV DAD
0101: LGEHMQRFKS RSKESRGNHT PLMGVPVRKS NVGINRGRND HHRRFYDVDT SSNYAADAIP QRRGSYRESN VTPKIAYEPS YLDIGEGVVY KIPPSYDKLV
0201: ASLNLPSFSD IHVDDFYLKG ALDLRSLAEL MARDKRSGAR SRNGMGEPRP QYDSLQARVK ALSASSSSPN FSLKVSEDAM NSVIPEGAAG TTARTILSEG
0301: GVLQVHYVKV LEKGDTYEIV QRSLPKKVKV KNDPAVIEKT ERDKIRKAWI NIVRRDIPKH HRVFTTFHRK QSIDAKRFAD GCQREVKMKV ARSFKLPRSA
0401: PIRTRKISRD MLLFWKRFDK QMPLMNFRIP RHEDESDYYG SSSQDETRGN QGGVVANYGN GVRRGMSSGT KKRKRWTEVD DDVEDGDDHY SQHVTEEHYR
0501: AMLGEHMQRF KSRSKESRGN HTPLMGVPVR KSNVGINRGR NDHHRRFYDV DTSSNYAADA IPQRRGSYRE SNVTPKIAYE PSYLDIGEGV VYKIPPSYDK
0601: LVASLNLPSF SDIHVDDFYL KGALDLRSLA ELMARDKRSG ARSRNGMGEP RPQYDSLQAR VKALSASSSS PNFSLKVSED AMNSVIPEGA AGTTARTILS
0701: EGGVLQVHYV KVLEKGDTYE IVQRSLPKKV KVKNDPAVIE KTERDKIRKA WINIVRRDIP KHHRVFTTFH RKQSIDAKRF ADGCQREVKM KVARSFKLPR
0801: SAPIRTRKIS RDMLLFWKRF DKQMAEERKK QEKEAAEALK REQELREAQR QQQRLNFLIK QTELYSHFMQ NKTDAMPSES LPLGDENLME DPEDAKMKED
0901: ALNAAREAVS KQRKITDAFD TEYMKLQQTS DMEGPSIDVS VSGSGNIDLH NPSTMPVTST VQTPEMFKGT LKEYQMKGLQ WLVNCYEQGL NGILADEMGL
1001: GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWADEIS RFCPDLKTLP YWGGLQERTI LRKNINPKRM YRRDAGFHIL ITSYQLLVTD EKYFRRVKWQ
1101: YMVLDEAQAI KSSTSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPMVFDSHE QFNEWFSKGI ENHAEHGGTL NEHQLNRLHA ILKPFMLRRV
1201: KKDVVSELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGHFND KKILNLMNIV IQLRKASSMV CNHPELFERN EGSSYLYFGV MSNSLLPPPF
1301: GELEDVHYSG GHNPITYEIP KLLQNEMLQN SETFCSSIGK GLSRESFLKN FNIFSPEYIH RSTLPSDSSS VDQAVSGSGA FAFSRLMDLS PSEVGYLALC
1401: SVMERLLFSI LKWERQFLDE IVDSFMESMD DDLDGDNMNT AQTRAVTRML LMPSKVETSL LKGRVGTGPT CHSIESLVIS HQDRLLSSIK LLHSAYTFIP
1501: KARAPPISVH CSDRNSAYRI TEEMHQPWLK RLLIGFARTS EANGPRKPSS VPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK LLTDSGKLQT
1601: LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQQ RNDIFVFLLS TRAGGLAMDR AHRLGQTKDV TVYRLICKET
1701: VEEKILHRAS QKNTVQQLVM TGGHVQGDDV FGTADVVSLL MDDAEAAQLE QKFRELPLQV KDRQKKKQPM KRIRIDAEGD ATLEELDDAT ERQDNGQEPS
1801: QEPETTKPSN KKRKAAPTPK SRVPQKAKEE ENGEGDDTLQ PQRTKRVKRQ TKSVNESLEP VFSASVTPTN GEFNPSSSNV DAD
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.