Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66858 | Soybean | nucleus | 96.41 | 96.34 |
| KRH33202 | Soybean | nucleus | 78.38 | 82.25 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 74.66 | 73.41 |
| Solyc04g016370.2.1 | Tomato | nucleus | 69.24 | 68.88 |
| CDX72050 | Canola | cytosol | 64.73 | 67.28 |
| Bra007318.1-P | Field mustard | nucleus | 65.32 | 66.84 |
| AT3G57300.2 | Thale cress | cytosol | 67.08 | 66.69 |
| Bra014632.1-P | Field mustard | cytosol | 65.51 | 66.25 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 60.88 | 63.75 |
| CDY30994 | Canola | nucleus | 26.06 | 62.34 |
| CDX88940 | Canola | nucleus | 65.12 | 60.28 |
| OQU92590 | Sorghum | nucleus | 55.19 | 60.14 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 57.09 | 58.5 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 57.15 | 58.49 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 57.02 | 58.36 |
| Zm00001d029180_P002 | Maize | nucleus | 57.09 | 57.31 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 56.83 | 57.2 |
| Zm00001d047471_P002 | Maize | nucleus | 56.24 | 54.95 |
| CDY06115 | Canola | nucleus | 65.12 | 52.95 |
| KRH76800 | Soybean | cytosol | 15.48 | 31.1 |
| KRH28662 | Soybean | cytosol | 15.28 | 30.67 |
| KRH49484 | Soybean | nucleus | 14.11 | 28.65 |
| KRG89166 | Soybean | nucleus | 13.91 | 28.32 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 14.5 | 25.28 |
| KRH05279 | Soybean | nucleus | 7.45 | 25.17 |
| KRG91253 | Soybean | nucleus | 16.39 | 23.39 |
| KRH35559 | Soybean | nucleus | 16.33 | 23.32 |
| KRH50913 | Soybean | nucleus | 16.07 | 23.25 |
| KRH21031 | Soybean | nucleus | 16.13 | 23.15 |
| KRH27613 | Soybean | nucleus | 16.07 | 23.14 |
| KRH11241 | Soybean | nucleus | 16.2 | 23.13 |
| KRH02212 | Soybean | nucleus | 15.68 | 22.66 |
| KRH73568 | Soybean | nucleus | 11.43 | 17.97 |
| KRH52357 | Soybean | nucleus | 16.72 | 17.78 |
| KRH61691 | Soybean | nucleus | 16.53 | 17.55 |
| KRH71872 | Soybean | nucleus | 21.75 | 16.32 |
| KRH38118 | Soybean | nucleus | 21.82 | 16.3 |
| KRH02187 | Soybean | nucleus | 13.78 | 15.26 |
| KRH14560 | Soybean | nucleus | 17.11 | 14.85 |
| KRH00799 | Soybean | nucleus | 18.22 | 12.56 |
| KRH40427 | Soybean | nucleus | 18.16 | 12.51 |
| KRH48113 | Soybean | nucleus | 18.09 | 12.44 |
| KRH06623 | Soybean | nucleus | 17.77 | 12.35 |
| KRH42374 | Soybean | nucleus | 17.11 | 12.11 |
| KRH58495 | Soybean | nucleus | 16.98 | 11.13 |
| KRH50934 | Soybean | nucleus | 17.64 | 7.13 |
Protein Annotations
| EntrezGene:100780615 | MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02012091 | ncoils:Coil |
| InterPro:DBINO | EnsemblPlantsGene:GLYMA_19G136000 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1N8X6 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | EnsemblPlants:KRG95191 |
| ProteinID:KRG95191 | ProteinID:KRG95191.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000233E8CA | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:39717782..39729913
Molecular Weight (calculated)
174930.0 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.614
Length
1531 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDHRPKSKDS LSYSTLFNLE PLMNFQLPKQ DDDFDYYGNS SQDESRDSEG GGITNHGNGN VHEKEVNLFK KRRWSLNSDN EEKTSFYGAH MTEERYRSML
0101: GEHIQKYKRR FKGTLSSPAQ NQAAAPLVKS NTGLKARKSG NEHRGGGLHV AESTSEWMND SSSQKPGNYR DADFSPQYGT DRIMYEPASL DIGDGIIYKI
0201: PPVYDKLAGA LNLPSFSDIH VEDFYLKGTL DLGSLAEMMA ADKRFGNRNR AGMGEAIPQF ESLQARLKVM SASNSAHKFS LKMSDVDLNS SIPEGAAGSI
0301: RRSILSEGGV LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPALIEKEEM ERCGKIWANI VRRDIPKHHR NFTIFHRKQL IDAKRVSETC QREVRMKVSR
0401: SLKWTRTVGM RTRKLARDML LFWKRIDKEM TEVRKREEKE AAEALRREQE LREAKRQQQR LNFLIQQTEL YSHFMQNKSN LLSSETLPKE DEDADDQDAL
0501: VDSSDVMPDE EVDPEEAELK KEALKAAQEA VSKQRMLTSA FDTECLRLRQ AGETDSLPPD VAGASNIDLQ TPSTMPVAST VRTPELFKGV LKEYQLKGLQ
0601: WLVNCYEQGL NGILADEMGL GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWNEELE RFCPELKRLP YWGGLSERTV LRKSINPKDL YRREAKFHIL
0701: ITSYQLLVSD EKYFRRVKWQ YMVLDEAQAI KSATSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPTLFDSHE QFNEWFSKGI ENHAEHGGTL
0801: NEHQLNRLHS ILKPFMLRRV KKDVISELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGQLNE KRILNLMNIV IQLRKVCNHP ELFERSEGST
0901: YLYFGEIPNS LPPPPFGEME DVYYSGGHNP ISYEIPKLVY QEIIQSSETL SSAVGPVVSR ESFHKHFNIF RPENVYRSVF SEDMYSKSGN FGFTHMMDLS
1001: PQEVTFLATG SFMERLLFSM MRWEQKFIDE AVDFLTETID DDPECSYLEK EKVRAVTRML LVPSRSETLV LQKKLQTGPS HAPFEALVVP HQDRVLSNAR
1101: LLHSAYTYIP QSRAPPIGAH CSDRNFCYKM IEELHDPWIK RLLVGFARTS DNNGPRKPDS PHHLIQEIDS ELPVSQPALE LTHSIFGSSP PMRNFDPAKL
1201: LTDSGKLQTL DILLKRLRAE NHRVLLFAQM TKMLNILEDY MNYRKYRYFR LDGSSTIQDR RDMVRDFQHR SDIFVFLLST RAGGLGINLT AADTVIFYES
1301: DWNPTLDLQA MDRAHRLGQT KDVTVYRLIC KETVEEKILL RASQKSTVQN LVMTGGSVGG DLLAPEDVVS LLLDDVQLEQ KLKEIPLQVK DKQKKKQPMR
1401: GIRVNEDGDA SMEDLTSSVA QGTSDNDLSM DPEGSKSSNK KRKAASDKPT SRPKNSQKMS EFSTMPMDGE LDDLDPVGQK PKRPKRIKKN VNEKFEDAFT
1501: WTASLVPEQS QFPPPRDFSV GGSKAESGQD N
0101: GEHIQKYKRR FKGTLSSPAQ NQAAAPLVKS NTGLKARKSG NEHRGGGLHV AESTSEWMND SSSQKPGNYR DADFSPQYGT DRIMYEPASL DIGDGIIYKI
0201: PPVYDKLAGA LNLPSFSDIH VEDFYLKGTL DLGSLAEMMA ADKRFGNRNR AGMGEAIPQF ESLQARLKVM SASNSAHKFS LKMSDVDLNS SIPEGAAGSI
0301: RRSILSEGGV LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPALIEKEEM ERCGKIWANI VRRDIPKHHR NFTIFHRKQL IDAKRVSETC QREVRMKVSR
0401: SLKWTRTVGM RTRKLARDML LFWKRIDKEM TEVRKREEKE AAEALRREQE LREAKRQQQR LNFLIQQTEL YSHFMQNKSN LLSSETLPKE DEDADDQDAL
0501: VDSSDVMPDE EVDPEEAELK KEALKAAQEA VSKQRMLTSA FDTECLRLRQ AGETDSLPPD VAGASNIDLQ TPSTMPVAST VRTPELFKGV LKEYQLKGLQ
0601: WLVNCYEQGL NGILADEMGL GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWNEELE RFCPELKRLP YWGGLSERTV LRKSINPKDL YRREAKFHIL
0701: ITSYQLLVSD EKYFRRVKWQ YMVLDEAQAI KSATSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPTLFDSHE QFNEWFSKGI ENHAEHGGTL
0801: NEHQLNRLHS ILKPFMLRRV KKDVISELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGQLNE KRILNLMNIV IQLRKVCNHP ELFERSEGST
0901: YLYFGEIPNS LPPPPFGEME DVYYSGGHNP ISYEIPKLVY QEIIQSSETL SSAVGPVVSR ESFHKHFNIF RPENVYRSVF SEDMYSKSGN FGFTHMMDLS
1001: PQEVTFLATG SFMERLLFSM MRWEQKFIDE AVDFLTETID DDPECSYLEK EKVRAVTRML LVPSRSETLV LQKKLQTGPS HAPFEALVVP HQDRVLSNAR
1101: LLHSAYTYIP QSRAPPIGAH CSDRNFCYKM IEELHDPWIK RLLVGFARTS DNNGPRKPDS PHHLIQEIDS ELPVSQPALE LTHSIFGSSP PMRNFDPAKL
1201: LTDSGKLQTL DILLKRLRAE NHRVLLFAQM TKMLNILEDY MNYRKYRYFR LDGSSTIQDR RDMVRDFQHR SDIFVFLLST RAGGLGINLT AADTVIFYES
1301: DWNPTLDLQA MDRAHRLGQT KDVTVYRLIC KETVEEKILL RASQKSTVQN LVMTGGSVGG DLLAPEDVVS LLLDDVQLEQ KLKEIPLQVK DKQKKKQPMR
1401: GIRVNEDGDA SMEDLTSSVA QGTSDNDLSM DPEGSKSSNK KRKAASDKPT SRPKNSQKMS EFSTMPMDGE LDDLDPVGQK PKRPKRIKKN VNEKFEDAFT
1501: WTASLVPEQS QFPPPRDFSV GGSKAESGQD N
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.