Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66858 | Soybean | nucleus | 73.47 | 74.67 |
| KRG95191 | Soybean | nucleus | 73.41 | 74.66 |
| KRH33202 | Soybean | nucleus | 69.17 | 73.82 |
| Solyc04g016370.2.1 | Tomato | nucleus | 71.87 | 72.71 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 64.23 | 68.4 |
| AT3G57300.2 | Thale cress | cytosol | 67.63 | 68.38 |
| CDX72050 | Canola | cytosol | 64.61 | 68.3 |
| Bra007318.1-P | Field mustard | nucleus | 65.19 | 67.85 |
| Bra014632.1-P | Field mustard | cytosol | 65.83 | 67.7 |
| CDY30994 | Canola | nucleus | 26.4 | 64.22 |
| OQU92590 | Sorghum | nucleus | 56.07 | 62.14 |
| CDX88940 | Canola | nucleus | 65.25 | 61.43 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 58.25 | 60.71 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 58.0 | 60.36 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 57.93 | 60.29 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 58.12 | 59.5 |
| Zm00001d029180_P002 | Maize | nucleus | 57.42 | 58.62 |
| Zm00001d047471_P002 | Maize | nucleus | 56.78 | 56.41 |
| CDY06115 | Canola | nucleus | 65.13 | 53.85 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 15.67 | 32.15 |
| VIT_01s0010g02080.t01 | Wine grape | cytosol | 13.81 | 29.53 |
| VIT_15s0021g02180.t01 | Wine grape | cytosol | 14.07 | 25.61 |
| VIT_05s0020g02960.t01 | Wine grape | nucleus | 16.76 | 23.66 |
| VIT_05s0020g01780.t01 | Wine grape | nucleus | 16.25 | 23.43 |
| VIT_04s0008g05880.t01 | Wine grape | nucleus | 16.57 | 17.53 |
| VIT_08s0007g06370.t01 | Wine grape | nucleus | 21.26 | 16.13 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 17.34 | 15.31 |
| VIT_15s0046g02290.t01 | Wine grape | plastid | 18.56 | 12.77 |
| VIT_01s0011g01480.t01 | Wine grape | nucleus | 16.76 | 12.1 |
| VIT_05s0020g02020.t01 | Wine grape | nucleus | 14.32 | 8.34 |
Protein Annotations
| EntrezGene:100250397 | wikigene:100250397 | MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ProteinID:CBI29799 |
| ProteinID:CBI29799.3 | ncoils:Coil | UniProt:D7THS3 | InterPro:DBINO | EMBL:FN595991 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 |
| InterPro:Ino80 | EntrezGene:LOC100250397 | wikigene:LOC100250397 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | TIGR:TC64038 |
| UniParc:UPI0001BE38D1 | ArrayExpress:VIT_08s0007g09020 | EnsemblPlantsGene:VIT_08s0007g09020 | EnsemblPlants:VIT_08s0007g09020.t01 | RefSeq:XP_002278785 | RefSeq:XP_002278785.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:22355199..22372637
Molecular Weight (calculated)
177227.0 Da
IEP (calculated)
8.386
GRAVY (calculated)
-0.586
Length
1557 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPKPHPNNG FSFSNLFNLE SLMNFQLPQQ DDDFDYYGNS SQDESRGSQG GTMGDYHNGI MSERELSLVS KKRRSQNSED EEEDGNYSTF ISEERYRSML
0101: GEHIQKYKRR FKDPSPSPAP ARMGVSVPKS TLGSKTRKLG NEHRGGLHEV ETPSEWLADV GPQKMVGFHD ADFAPEYGTS RTIYESSYLD IGEGIAYRIP
0201: PAYEKLAVTL NLPTFSDIRV EEYYLKSTLD LGSLAEMMTA DKRFGPKSRA GMGEPQSQYE SLQARLRALS SSNSVQKFSL KVSDIALNSS SIPEGAAGSI
0301: QRSILSEGGA LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPSMIEKEEM ERIGKVWVNI VRRDIPKHQR IFINFHRKQL IDAKRFSENC QREVKLKVSR
0401: SLKLMRGAAI RTRKLARDML VFWKRVDKEM AELRKKEERE AAEALRREQE LREVKRQQQR LNFLITQTEL FSHFMQNKAT SQPSEALPVD GEKPKDQELL
0501: VSSSDDVPGE EQDPEDDELK KEALKAAQDA VSKQKRLTSA FDNECLKLRQ AAEPEVPSPD ASGAAGSSNI DLLHPSTMPV ASSVQTPELF KGSLKEYQLK
0601: GLQWLVNCYE QGLNGILADE MGLGKTIQAM AFLAHLAEEK NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RMILRKNINP KRLYRREAGF
0701: HILITSYQLL VSDEKYFRRV KWQYMVLDEA QAIKSSNSIR WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPTLFD SHEQFNEWFS KGIENHAEHG
0801: GTLNEHQLNR LHAILKPFML RRVKKDVVSE LTGKTEVTVH CKLSSRQQAF YQAIKNKISL AELFDGNRGH LNEKKILNLM NIVIQLRKVC NHPELFERNE
0901: GSTYLYFGEI PNSLLPPPFG ELEDMHYAGA QNPITYKVPK LVHQEVMQSS GIISSTARRG VHRETFLKHF NIFSPVNIYQ SVLPQENNSN GSAVKSGTFG
1001: FTHLMDLSPE EVAFLATGTF MERLLFFIMR WDRQFLDGIL DLLMEAEEED FSNSHLDSGK VRAVTRMLLM PSRSETNLLR RKLATGLGHA PFEALVVPHQ
1101: DRLQANTRLV HATYTFIPRT RAPPINAHCS NRNFAYKLLE ELHHPWLKRL FIGFARTSDY NGPKKPDVPH HLIQEIDSEL PVSKPALQLT YKIFGSSPPM
1201: QSFDPAKLLT DSGKLQTLDI LLKRLRAENH RVLLFAQMTK MLNILEDYMN YRKYRYLRLD GSSTIMDRRD MVRDFQLRSD IFVFLLSTRA GGLGINLTAA
1301: DTVIFYESDW NPTLDLQAMD RAHRLGQTKD VTVYRLICKE TVEEKILQRA SQKSTVQQLV MTGGHVQGDL LAPEDVVSLL LDDAQLEQKL RDLPLQDKQK
1401: KKRGTKGILL DAEGDATLED FPNISQGNGQ EPSPDAERPK SSSKKRKAAT DKQTPPKPRN SQKAMKNVDS YTGMTDPNSM AMDYELDDSL QNDDMQLQKH
1501: KRPKRPTKSV NENLEPAFTN STVIIEQTQY QPHLELGPGG LRAGGKDDTP LHTDSLT
0101: GEHIQKYKRR FKDPSPSPAP ARMGVSVPKS TLGSKTRKLG NEHRGGLHEV ETPSEWLADV GPQKMVGFHD ADFAPEYGTS RTIYESSYLD IGEGIAYRIP
0201: PAYEKLAVTL NLPTFSDIRV EEYYLKSTLD LGSLAEMMTA DKRFGPKSRA GMGEPQSQYE SLQARLRALS SSNSVQKFSL KVSDIALNSS SIPEGAAGSI
0301: QRSILSEGGA LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPSMIEKEEM ERIGKVWVNI VRRDIPKHQR IFINFHRKQL IDAKRFSENC QREVKLKVSR
0401: SLKLMRGAAI RTRKLARDML VFWKRVDKEM AELRKKEERE AAEALRREQE LREVKRQQQR LNFLITQTEL FSHFMQNKAT SQPSEALPVD GEKPKDQELL
0501: VSSSDDVPGE EQDPEDDELK KEALKAAQDA VSKQKRLTSA FDNECLKLRQ AAEPEVPSPD ASGAAGSSNI DLLHPSTMPV ASSVQTPELF KGSLKEYQLK
0601: GLQWLVNCYE QGLNGILADE MGLGKTIQAM AFLAHLAEEK NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RMILRKNINP KRLYRREAGF
0701: HILITSYQLL VSDEKYFRRV KWQYMVLDEA QAIKSSNSIR WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPTLFD SHEQFNEWFS KGIENHAEHG
0801: GTLNEHQLNR LHAILKPFML RRVKKDVVSE LTGKTEVTVH CKLSSRQQAF YQAIKNKISL AELFDGNRGH LNEKKILNLM NIVIQLRKVC NHPELFERNE
0901: GSTYLYFGEI PNSLLPPPFG ELEDMHYAGA QNPITYKVPK LVHQEVMQSS GIISSTARRG VHRETFLKHF NIFSPVNIYQ SVLPQENNSN GSAVKSGTFG
1001: FTHLMDLSPE EVAFLATGTF MERLLFFIMR WDRQFLDGIL DLLMEAEEED FSNSHLDSGK VRAVTRMLLM PSRSETNLLR RKLATGLGHA PFEALVVPHQ
1101: DRLQANTRLV HATYTFIPRT RAPPINAHCS NRNFAYKLLE ELHHPWLKRL FIGFARTSDY NGPKKPDVPH HLIQEIDSEL PVSKPALQLT YKIFGSSPPM
1201: QSFDPAKLLT DSGKLQTLDI LLKRLRAENH RVLLFAQMTK MLNILEDYMN YRKYRYLRLD GSSTIMDRRD MVRDFQLRSD IFVFLLSTRA GGLGINLTAA
1301: DTVIFYESDW NPTLDLQAMD RAHRLGQTKD VTVYRLICKE TVEEKILQRA SQKSTVQQLV MTGGHVQGDL LAPEDVVSLL LDDAQLEQKL RDLPLQDKQK
1401: KKRGTKGILL DAEGDATLED FPNISQGNGQ EPSPDAERPK SSSKKRKAAT DKQTPPKPRN SQKAMKNVDS YTGMTDPNSM AMDYELDDSL QNDDMQLQKH
1501: KRPKRPTKSV NENLEPAFTN STVIIEQTQY QPHLELGPGG LRAGGKDDTP LHTDSLT
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.