Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014632.1-P | Field mustard | cytosol | 87.03 | 86.0 |
| AT3G57300.2 | Thale cress | cytosol | 85.03 | 82.6 |
| CDY06115 | Canola | nucleus | 98.13 | 77.96 |
| KRG95191 | Soybean | nucleus | 66.84 | 65.32 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 67.85 | 65.19 |
| KRH33202 | Soybean | nucleus | 63.37 | 64.98 |
| KRH66858 | Soybean | nucleus | 66.38 | 64.82 |
| Solyc04g016370.2.1 | Tomato | nucleus | 65.04 | 63.22 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 58.69 | 60.05 |
| OQU92590 | Sorghum | nucleus | 53.94 | 57.44 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 56.08 | 56.08 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 55.95 | 56.02 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 55.75 | 55.75 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 55.95 | 55.03 |
| Zm00001d029180_P002 | Maize | nucleus | 55.68 | 54.62 |
| Zm00001d047471_P002 | Maize | nucleus | 55.21 | 52.71 |
| Bra012099.1-P | Field mustard | cytosol | 14.17 | 27.5 |
| Bra017422.1-P | Field mustard | cytosol | 13.24 | 25.98 |
| Bra040221.1-P | Field mustard | nucleus | 15.98 | 22.78 |
| Bra020751.1-P | Field mustard | nucleus | 15.71 | 22.32 |
| Bra002173.1-P | Field mustard | nucleus | 15.64 | 21.99 |
| Bra040237.1-P | Field mustard | nucleus | 15.91 | 21.64 |
| Bra023689.1-P | Field mustard | nucleus | 15.31 | 20.8 |
| Bra004881.1-P | Field mustard | nucleus | 7.75 | 17.93 |
| Bra011311.1-P | Field mustard | nucleus | 14.1 | 17.38 |
| Bra037150.1-P | Field mustard | nucleus | 13.9 | 17.35 |
| Bra007814.1-P | Field mustard | nucleus | 14.24 | 15.6 |
| Bra034727.1-P | Field mustard | nucleus | 19.85 | 14.71 |
| Bra037208.1-P | Field mustard | nucleus | 15.31 | 13.58 |
| Bra039296.1-P | Field mustard | plastid | 18.11 | 12.68 |
| Bra000409.1-P | Field mustard | plastid | 17.91 | 12.4 |
| Bra027574.1-P | Field mustard | nucleus | 15.11 | 10.17 |
| Bra000114.1-P | Field mustard | nucleus | 15.91 | 7.27 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EnsemblPlantsGene:Bra007318 | EnsemblPlants:Bra007318.1 | EnsemblPlants:Bra007318.1-P |
| ncoils:Coil | InterPro:DBINO | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | UniProt:M4CSX6 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0002542C8D | SEG:seg | : | : | : | : |
Description
AT3G57300 (E=0.0) INO80, ATINO80 | INO80 (INO80 ORTHOLOG); ATP binding / DNA binding / helicase/ nucleic acid binding
Coordinates
chrA09:+:28553485..28560510
Molecular Weight (calculated)
170522.0 Da
IEP (calculated)
8.985
GRAVY (calculated)
-0.624
Length
1496 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPSRRQFRD SRYANLFDLE PLMNFRIPRH EDESDYYGSS SQDETRGNQG GLIANYGNGV KRGMSSGTKK RKRWIEADDD VEDGDDHYSQ HVTEEHYRAM
0101: LGEHMQRFKN RSKESRGNHT PLMGVPVRKS NVGINRGRND HHRRFYDVDT SSNFAADPIP QRRGSYRESN ITPKIAYEPS YLDIGEGVVY KIPPSYDKLV
0201: ASLNLPSFSD IHVDDFYLKG ALDLRSLAEL MARDKRSGSR SRNGMGEPRP QYDSLQARVK ALSASSSSPN FSLKVSEDAM NSVIPEGAAG TTARTILSEG
0301: GVLQVHYVKV LEKGDTYEIV QRSLPKKVKV KNDPAVIEKT ERDKIRKAWI NIVRRDIPKH HRVFTTFHRK QSIDAKRFAD GCQREVKMKV ARSFKLPRSA
0401: PIRTRKISRD MLLFWKRFDK QMAEERKKQE KEAAEALKRE QELREAQRQQ QRLNFLIKQT ELYSHFMQNK TDAMPSESLP IGDENLVDEA LQEPSAAKLS
0501: EMEDPEDAKM KEDALNAARE AVSKQRKITD AFDTEYMKLQ KTSDMEGPPI DVSVSGSGNI DLHNPSTMPV TSTVQTPEMF KGTLKEYQMK GLQWLVNCYE
0601: QGLNGILADE MGLGKTIQAM AFLAHLAEEK NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RTILRKNINP KRMYRRDAGF HILITSYQLL
0701: VTDEKYFRRV KWQYMVLDEA QAIKSSTSIR WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPMVFD SHEQFNEWFS KGIENHAEHG GTLNEHQLNR
0801: LHAILKPFML RRVKKDVVSE LTTKTEVTVH CKLSSRQQAF YQAIKNKISL AELFDSNRGH FNDKKILNLM NIVIQLRKAS SMVCNHPELF ERNEGSSYLY
0901: FGVMSNSLLP PPFGELEDVH YSGGHNPITY EIPKLLQNEM LQNSETFCSS IGKGLSRESF LKNFNIFSPE YIHRSTLPSD SSSVDQAVSG SGAFAFSRLM
1001: DLSPSEVGYL ALCSVMERLL FSILKWERQF LDEIVDSFME SMDDDLDGDN MNTAQTRAVT RMLLMPSKVE TSLLKGRVGT GPTCHSIESL VISHQDRLLS
1101: SIKLLHSAYT FIPKARAPPI SVHCSDRNSA YRITEEMHQP WLKRLLIGFA RTSEANGPRK PSSVPHPLIQ EIDSELPVVQ PALQLTHIIF GSCPPMQSFD
1201: PAKLLTDSGK LQTLDILLKR LRAGNHRVLL FAQMTKMLNI LEDYMNYRKY KYLRLDGSST IMDRRDMVRD FQQRNDIFVF LLSTRAGGLA MDRAHRLGQT
1301: KDVTVYRLIC KETVEEKILH RASQKNTVQQ LVMTGGHVQG DDVFGTADVV SLLMDDAEAA QLEQKFRELP LQVKDRQKKK QPMKRIRIDA EGDATLEELD
1401: DATERQDNGQ EPSQEPETTK PSNKKRKAAP TPKSRVPQKA KEEENGEGDD TLQPQRTKRV KRQTKSVNES LEPVFSASVT PTNGEFNPSS SNVDAD
0101: LGEHMQRFKN RSKESRGNHT PLMGVPVRKS NVGINRGRND HHRRFYDVDT SSNFAADPIP QRRGSYRESN ITPKIAYEPS YLDIGEGVVY KIPPSYDKLV
0201: ASLNLPSFSD IHVDDFYLKG ALDLRSLAEL MARDKRSGSR SRNGMGEPRP QYDSLQARVK ALSASSSSPN FSLKVSEDAM NSVIPEGAAG TTARTILSEG
0301: GVLQVHYVKV LEKGDTYEIV QRSLPKKVKV KNDPAVIEKT ERDKIRKAWI NIVRRDIPKH HRVFTTFHRK QSIDAKRFAD GCQREVKMKV ARSFKLPRSA
0401: PIRTRKISRD MLLFWKRFDK QMAEERKKQE KEAAEALKRE QELREAQRQQ QRLNFLIKQT ELYSHFMQNK TDAMPSESLP IGDENLVDEA LQEPSAAKLS
0501: EMEDPEDAKM KEDALNAARE AVSKQRKITD AFDTEYMKLQ KTSDMEGPPI DVSVSGSGNI DLHNPSTMPV TSTVQTPEMF KGTLKEYQMK GLQWLVNCYE
0601: QGLNGILADE MGLGKTIQAM AFLAHLAEEK NIWGPFLVVA PASVLNNWAD EISRFCPDLK TLPYWGGLQE RTILRKNINP KRMYRRDAGF HILITSYQLL
0701: VTDEKYFRRV KWQYMVLDEA QAIKSSTSIR WKTLLSFNCR NRLLLTGTPI QNNMAELWAL LHFIMPMVFD SHEQFNEWFS KGIENHAEHG GTLNEHQLNR
0801: LHAILKPFML RRVKKDVVSE LTTKTEVTVH CKLSSRQQAF YQAIKNKISL AELFDSNRGH FNDKKILNLM NIVIQLRKAS SMVCNHPELF ERNEGSSYLY
0901: FGVMSNSLLP PPFGELEDVH YSGGHNPITY EIPKLLQNEM LQNSETFCSS IGKGLSRESF LKNFNIFSPE YIHRSTLPSD SSSVDQAVSG SGAFAFSRLM
1001: DLSPSEVGYL ALCSVMERLL FSILKWERQF LDEIVDSFME SMDDDLDGDN MNTAQTRAVT RMLLMPSKVE TSLLKGRVGT GPTCHSIESL VISHQDRLLS
1101: SIKLLHSAYT FIPKARAPPI SVHCSDRNSA YRITEEMHQP WLKRLLIGFA RTSEANGPRK PSSVPHPLIQ EIDSELPVVQ PALQLTHIIF GSCPPMQSFD
1201: PAKLLTDSGK LQTLDILLKR LRAGNHRVLL FAQMTKMLNI LEDYMNYRKY KYLRLDGSST IMDRRDMVRD FQQRNDIFVF LLSTRAGGLA MDRAHRLGQT
1301: KDVTVYRLIC KETVEEKILH RASQKNTVQQ LVMTGGHVQG DDVFGTADVV SLLMDDAEAA QLEQKFRELP LQVKDRQKKK QPMKRIRIDA EGDATLEELD
1401: DATERQDNGQ EPSQEPETTK PSNKKRKAAP TPKSRVPQKA KEEENGEGDD TLQPQRTKRV KRQTKSVNES LEPVFSASVT PTNGEFNPSS SNVDAD
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.