Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37209 | Canola | nucleus | 99.76 | 99.76 |
| CDX81444 | Canola | nucleus | 98.22 | 97.81 |
| AT2G13370.2 | Thale cress | nucleus | 89.26 | 87.3 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 26.33 | 77.35 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 71.53 | 68.41 |
| Solyc12g099910.1.1 | Tomato | nucleus | 68.15 | 67.31 |
| KRH14560 | Soybean | nucleus | 70.17 | 67.06 |
| KRH73568 | Soybean | nucleus | 38.08 | 65.91 |
| Os07t0660200-01 | Rice | nucleus | 23.61 | 63.07 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 59.96 | 60.18 |
| Zm00001d022405_P051 | Maize | nucleus | 57.47 | 56.21 |
| KXG36860 | Sorghum | nucleus | 57.18 | 55.82 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 57.18 | 55.79 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 57.18 | 55.79 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 57.12 | 55.73 |
| Zm00001d007089_P003 | Maize | nucleus | 53.08 | 51.53 |
| Bra040221.1-P | Field mustard | nucleus | 20.11 | 32.32 |
| Bra020751.1-P | Field mustard | nucleus | 20.05 | 32.1 |
| Bra012099.1-P | Field mustard | cytosol | 14.53 | 31.78 |
| Bra002173.1-P | Field mustard | nucleus | 19.99 | 31.67 |
| Bra023689.1-P | Field mustard | nucleus | 20.17 | 30.88 |
| Bra040237.1-P | Field mustard | nucleus | 17.32 | 26.55 |
| Bra017422.1-P | Field mustard | cytosol | 11.86 | 26.25 |
| Bra011311.1-P | Field mustard | nucleus | 18.33 | 25.45 |
| Bra007814.1-P | Field mustard | nucleus | 20.11 | 24.84 |
| Bra004881.1-P | Field mustard | nucleus | 8.3 | 21.64 |
| Bra037150.1-P | Field mustard | nucleus | 14.23 | 20.02 |
| Bra014632.1-P | Field mustard | cytosol | 14.29 | 15.92 |
| Bra027574.1-P | Field mustard | nucleus | 20.23 | 15.35 |
| Bra007318.1-P | Field mustard | nucleus | 13.58 | 15.31 |
| Bra034727.1-P | Field mustard | nucleus | 17.08 | 14.26 |
| Bra039296.1-P | Field mustard | plastid | 17.56 | 13.85 |
| Bra000409.1-P | Field mustard | plastid | 17.62 | 13.74 |
| Bra000114.1-P | Field mustard | nucleus | 18.68 | 9.62 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:12.4.1.1.2 | MapMan:15.3.4.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| EnsemblPlantsGene:Bra037208 | EnsemblPlants:Bra037208.1 | EnsemblPlants:Bra037208.1-P | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain |
| ncoils:Coil | InterPro:DUF4208 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0009506 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | UniProt:M4F7Z7 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 | PFAM:PF13907 | PFscan:PS50013 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF952 | SMART:SM00298 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM01176 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF54160 |
| UniParc:UPI0002541C1F | SEG:seg | : | : | : | : |
Description
AT2G13370 (E=0.0) CHR5 | CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding
Coordinates
chrA09:+:3929569..3939249
Molecular Weight (calculated)
192296.0 Da
IEP (calculated)
5.436
GRAVY (calculated)
-0.784
Length
1686 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFRNYSND TVSPSALDDN QDAATFQSSS PLQQDMDASY NTERGFDMNL DVQYQCEAEP GSSIGQQSQT GVAVSSGRRT GVSGKWGSTF WKDCQPMGQR
0101: DGAGSAKHSL EYLSNSEKLD SENENEEDKG MNKQQSGQGD VPAEEMLSDE YYEQDEDNQS DHVQYKAFGD PINSRSLPKT GSSIHSKSRT SRAIQKNIHY
0201: GDADIDYEEE EDEDDPEDAD FEPYDAASGG DASKKNDQDW DVSDEDPDSD DDFDLPDSED DYDTKKPKAR QQGKGFRKLS SGLDRKSAQA SSRQKRKPSY
0301: QEDFSEDDSD NEIDEGFRSL PRRGTTLGKN NGRSTNNIGQ SSEVRSSTRS VRKVSYVESE DSEEIDDGKN RKTQKDDIEE EDCDAIEKVL WHQPKGMSGD
0401: AHTNKKLTVP VLLSQLFDTQ PDWNEMEFLI KWKGQSHLHC QWKSLTDLQN LSGFKKVLNY TKKVTEEIRY RTALSREEIE VSDVSKEMDL DIIKQNCQVE
0501: RIIADRISKD DLGDVVPEYL VKWQGLSYAE ATWEKDVDIA FAQAAIDEYK AREVSIAVQG KMVEQQRTKG KVSLRKLEEQ PEWLSGGTLR DYQLQGLNFL
0601: VNSWLNDTNV ILADEMGLGK TVQSVSMLGF LQNTQQIPGP FLVVVPLSTL ANWAKEFRKW LPDMNIIVYV GTRASREVCQ QYEFYNEKNV GRPIKFNALL
0701: TTYEVVLKDK AVLSKIKWIY LMVDEAHRLK NSEAQLYTAL LEFSTKNKLL ITGTPLQNSV EELWALLHFL DPAKFKNKDE FVQNYKNLSS FNESELANLH
0801: LELRPHILRR VIKDVEKSLP PKIERILRVE MSPLQKQYYK WILERNFHDL NKGVRGNQVS LLNIVVELKK CCNHPFLFES ADHGYGGDIN DNTKLDKIIL
0901: SSGKLVILDK LLVRLRETKH RVLIFSQMVR MLDILAEYLS LRGFQFQRLD GSTKAELRQQ AMDHFNAPAS DDFCFLLSTR AGGLGINLAT ADTVVIFDSD
1001: WNPQNDLQAM SRAHRIGQQE VVNIYRFVTS KSVEEEILER AKRKMVLDHL VIQKLNAEGR LEKRETKKGA NFDKNELSAI LRFGAEELFK EDKNDEESKK
1101: RLLSMDIDEI LERAEQVEEK DAGESEHELL GAFKASSYVA NFCNAEDDGS FWSRWIKPES VVTADEALAP RAARNTKSYV DHDRSQPDRT SKRKKKGSEP
1201: PDRSQKRRKT EYFVPSTPIL EGTTAQVRGW SYGNLPKRDA QRFYRTVMKF GNHNQIACIA EEVGGVVEAA PEEAQVELFD ALIDGCRESV ETEDFESKGP
1301: VLDFFGVPVK ANELLKRVEG LQLLSKRISR YDDPITQFRV LSYLKPSNWS KGCGWNQIDD ARLLLGILYH GFGNWEKIRL DESLGLTKKI APVELQHHET
1401: FLPRAPNLKE RATALLEMEL SAAGGKNTNA KASRKNSKKA VINQLKAPAR DRKGKSGPAN LITIKDVGPR RTQKAEPLVK EEGEMSDDEE VYEQFKEQKW
1501: MEWCEDVLAG EIKTLERLQR LQTISADLPK EKVLFKIRRY LQILGRRIDE VVLEHEEDSY KQDRMTMRLW NYVSTFSNLS GDRLNQIYSK LKQEREEEEG
1601: VGPSQLNGST AGRRQQRFKT PGPPQVHKGI DTAKFEAWKR RKRTENNDVH QSERPLMSNN SNSLGILGPA PSDRSHRARQ AGFPPR
0101: DGAGSAKHSL EYLSNSEKLD SENENEEDKG MNKQQSGQGD VPAEEMLSDE YYEQDEDNQS DHVQYKAFGD PINSRSLPKT GSSIHSKSRT SRAIQKNIHY
0201: GDADIDYEEE EDEDDPEDAD FEPYDAASGG DASKKNDQDW DVSDEDPDSD DDFDLPDSED DYDTKKPKAR QQGKGFRKLS SGLDRKSAQA SSRQKRKPSY
0301: QEDFSEDDSD NEIDEGFRSL PRRGTTLGKN NGRSTNNIGQ SSEVRSSTRS VRKVSYVESE DSEEIDDGKN RKTQKDDIEE EDCDAIEKVL WHQPKGMSGD
0401: AHTNKKLTVP VLLSQLFDTQ PDWNEMEFLI KWKGQSHLHC QWKSLTDLQN LSGFKKVLNY TKKVTEEIRY RTALSREEIE VSDVSKEMDL DIIKQNCQVE
0501: RIIADRISKD DLGDVVPEYL VKWQGLSYAE ATWEKDVDIA FAQAAIDEYK AREVSIAVQG KMVEQQRTKG KVSLRKLEEQ PEWLSGGTLR DYQLQGLNFL
0601: VNSWLNDTNV ILADEMGLGK TVQSVSMLGF LQNTQQIPGP FLVVVPLSTL ANWAKEFRKW LPDMNIIVYV GTRASREVCQ QYEFYNEKNV GRPIKFNALL
0701: TTYEVVLKDK AVLSKIKWIY LMVDEAHRLK NSEAQLYTAL LEFSTKNKLL ITGTPLQNSV EELWALLHFL DPAKFKNKDE FVQNYKNLSS FNESELANLH
0801: LELRPHILRR VIKDVEKSLP PKIERILRVE MSPLQKQYYK WILERNFHDL NKGVRGNQVS LLNIVVELKK CCNHPFLFES ADHGYGGDIN DNTKLDKIIL
0901: SSGKLVILDK LLVRLRETKH RVLIFSQMVR MLDILAEYLS LRGFQFQRLD GSTKAELRQQ AMDHFNAPAS DDFCFLLSTR AGGLGINLAT ADTVVIFDSD
1001: WNPQNDLQAM SRAHRIGQQE VVNIYRFVTS KSVEEEILER AKRKMVLDHL VIQKLNAEGR LEKRETKKGA NFDKNELSAI LRFGAEELFK EDKNDEESKK
1101: RLLSMDIDEI LERAEQVEEK DAGESEHELL GAFKASSYVA NFCNAEDDGS FWSRWIKPES VVTADEALAP RAARNTKSYV DHDRSQPDRT SKRKKKGSEP
1201: PDRSQKRRKT EYFVPSTPIL EGTTAQVRGW SYGNLPKRDA QRFYRTVMKF GNHNQIACIA EEVGGVVEAA PEEAQVELFD ALIDGCRESV ETEDFESKGP
1301: VLDFFGVPVK ANELLKRVEG LQLLSKRISR YDDPITQFRV LSYLKPSNWS KGCGWNQIDD ARLLLGILYH GFGNWEKIRL DESLGLTKKI APVELQHHET
1401: FLPRAPNLKE RATALLEMEL SAAGGKNTNA KASRKNSKKA VINQLKAPAR DRKGKSGPAN LITIKDVGPR RTQKAEPLVK EEGEMSDDEE VYEQFKEQKW
1501: MEWCEDVLAG EIKTLERLQR LQTISADLPK EKVLFKIRRY LQILGRRIDE VVLEHEEDSY KQDRMTMRLW NYVSTFSNLS GDRLNQIYSK LKQEREEEEG
1601: VGPSQLNGST AGRRQQRFKT PGPPQVHKGI DTAKFEAWKR RKRTENNDVH QSERPLMSNN SNSLGILGPA PSDRSHRARQ AGFPPR
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.