Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36860 | Sorghum | nucleus | 89.23 | 89.75 |
| Zm00001d022405_P051 | Maize | nucleus | 87.56 | 88.23 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 28.44 | 86.06 |
| Os07t0660200-01 | Rice | nucleus | 29.25 | 80.51 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 76.74 | 77.14 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 76.63 | 77.03 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 76.57 | 76.97 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 59.18 | 61.19 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 55.5 | 54.68 |
| Solyc12g099910.1.1 | Tomato | nucleus | 53.54 | 54.48 |
| KRH73568 | Soybean | nucleus | 30.17 | 53.8 |
| KRH14560 | Soybean | nucleus | 54.58 | 53.74 |
| Bra037208.1-P | Field mustard | nucleus | 51.53 | 53.08 |
| CDY37209 | Canola | nucleus | 51.47 | 53.02 |
| CDX81444 | Canola | nucleus | 51.41 | 52.75 |
| AT2G13370.2 | Thale cress | nucleus | 51.93 | 52.32 |
| Zm00001d009312_P028 | Maize | nucleus | 19.29 | 29.65 |
| Zm00001d040831_P021 | Maize | nucleus | 18.94 | 29.38 |
| Zm00001d007978_P003 | Maize | cytosol | 12.9 | 28.43 |
| Zm00001d033827_P006 | Maize | cytosol | 12.84 | 26.3 |
| Zm00001d024816_P007 | Maize | cytosol | 15.43 | 24.14 |
| Zm00001d006798_P002 | Maize | nucleus | 15.31 | 23.84 |
| Zm00001d048552_P005 | Maize | cytosol | 11.86 | 22.79 |
| Zm00001d045109_P008 | Maize | cytosol | 16.81 | 21.89 |
| Zm00001d002656_P002 | Maize | nucleus | 10.31 | 18.28 |
| Zm00001d029180_P002 | Maize | nucleus | 13.41 | 15.28 |
| Zm00001d047471_P002 | Maize | nucleus | 13.36 | 14.81 |
| Zm00001d021541_P002 | Maize | nucleus | 18.88 | 14.74 |
| Zm00001d015595_P001 | Maize | cytosol | 1.67 | 14.72 |
| Zm00001d006428_P002 | Maize | nucleus | 18.42 | 14.61 |
| Zm00001d017660_P021 | Maize | nucleus | 16.18 | 13.63 |
| Zm00001d051507_P007 | Maize | nucleus | 15.95 | 13.44 |
| Zm00001d014977_P002 | Maize | nucleus | 15.26 | 12.25 |
| Zm00001d037346_P007 | Maize | nucleus | 16.98 | 7.74 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103647912 | Gene3D:2.40.50.40 | MapMan:35.1 | UniProt:A0A1D6F350 | InterPro:Chromo-like_dom_sf |
| InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain | ncoils:Coil | InterPro:DUF4208 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006338 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016818 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 |
| InterPro:IPR014001 | ProteinID:ONM25873.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 |
| PFAM:PF09111 | PFAM:PF13907 | PFscan:PS50013 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF952 | InterPro:SLIDE | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01176 |
| InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI0008443B88 | EnsemblPlantsGene:Zm00001d007089 | EnsemblPlants:Zm00001d007089_P003 |
| EnsemblPlants:Zm00001d007089_T003 | SEG:seg | : | : | : | : |
Description
Protein CHROMATIN REMODELING 5
Coordinates
chr2:-:221949341..221966837
Molecular Weight (calculated)
197308.0 Da
IEP (calculated)
6.070
GRAVY (calculated)
-0.757
Length
1737 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFSNSGSK ADSEGYNLNE KADDDGIHES IRDGNDGLNS RQWNLNEKAE DAYHSEAEQY ESGQSGLYAS RQHVQRGGRS SGGPWGTNFL KDSRSKQTAK
0101: EVASNSGRGM DAANSHDDMD GSREDDELNR ANGEVPAEEM LSDDYYEQDG EDQIESLHRG GMKQSSCSTS GGAAKSGSRQ MKKMSKYNAY DNDEYNDEND
0201: DDSDADEDDP ADMDFEPDGE TDKATDKDKF MDSENSDGDD DDDLELSDDE DDFVENRRQP KRLKIVATKT SKGGQLPMPV QPKRGVSHSD EEYFSGKDSD
0301: VPSDSDFKHI PKKPDRLHQK PVGRSDVAPI SSHNELRTSG RRRTVKKISY AESEESDDSE EKSNKRQKLI KEEPEEEDGE TIEKVLWHQP KGVAEEAIRN
0401: HRSAQPTVAS LTSDFDQQWD ELEFYIKWKG QSYLHCQWKI LSELQSVSGF KKVINYTKRV SEEQRYKRAL SREEVEVERI FADRVSKADG DDLVPEYLVK
0501: WQGLPYAEST CFSPLVFVIK SSTSVGIQSS LRRLDGQPEW LKAGKLRDYQ LEGLNFLVNG WRNDTNVILA DEMGLGKTIQ SVSMLGFLHN AQEINGPFLV
0601: VVPLSTLSNW AKEFRKWLPN MNVVVYVGNR ASREMCQQHE FFSDKKGGRH VKFHTLITTY EVILKDKAVL SKIKWNYLMV DEAHRLKNCE ASLYTTLLEF
0701: STKNKLLITG TPLQNSVEEL WALLHFLDPV KFNSKDSFVE RYKNLSSFNE TELANLHKEL RPHILRRVIK DVEKSLPPKI ERILRVEMSP LQKQYYKWIL
0801: ERNFQNLNKG VRGNQLFQLA HLGIECNLAV SDLDWNNVTI LSHLLLLGQA VPHLLLLAQE VSHLAVHYLS NWSMGKATRQ DLAVVSLLNI VVELKKCCNH
0901: PFLFESADHG YGGDSIGDRN KVERIVMSSG KLVLLDKLLV RLRETNHRVL IFSQGLFSVV WFGSNPHYGC PKRESKKMVK MLDILAEYLS LRGFQFQRLD
1001: GSTRADLRHQ AMEHFNAPGS DDFCFLLSTR AGGLGINLAT ADTVIIFDSD WNPQNDLQVL DHLVIQKLNA EGRLEKKESK KGGPIFDKNE LSAILRFGAE
1101: ELFKEDKTDE ETKRNLESLD IDEILERAEK VETKGGEGEE GNELLSAFKA CDVANFSSVE DDATFWSRLI QPDPADIVQE TLAPRAARNK KSYIEDPQLD
1201: KNNNRKRRAV ETQEKPRRLS GRTVETVNSL PLVDGAVAQV REWSFGNVPK KDASRFVRAV KKFGNATQIG LIVDDVGGVL AKVPHEAQIE LFDLLVDGCQ
1301: EAVKENTDIK GTVLDFFGVA VKAYELLARV EELQFLAKRI ARYKDPIKQY RIQLPYKKPQ WSASCGWTET DDARLMVGIH WYGYGNWEKI RLDPKLGLTT
1401: KIAPATLGER ETFLPRAPNL DNRASALLQK EYAKFSGKSL KVKGNTRQTV NNDSNSGVRS MRGRQKDVPE KDDNKPNKDD IQKRRVIVEA EAREEGEISE
1501: SEAETRYRQD KEEKWLEWCS EVLDEEQETL KRLDRLQNTS VNLPKEKVLS RIRKYLLIIG DKIGEVVRQH SESYRQSRMV MRLWNYVATF SNMSGEQLHD
1601: LYMKLSQDQL EGGVGPSHGG NFTSIPPNKG GNSNQLHPSR NQRPTRSLQY NSESFHNESS GSSEAWKRRR RADTDNQFDT QPLCQPPIMT NGNRLQESSS
1701: SAGILGWGPV EIRRYGNERP KRAVHPSHFP TGHGPLL
0101: EVASNSGRGM DAANSHDDMD GSREDDELNR ANGEVPAEEM LSDDYYEQDG EDQIESLHRG GMKQSSCSTS GGAAKSGSRQ MKKMSKYNAY DNDEYNDEND
0201: DDSDADEDDP ADMDFEPDGE TDKATDKDKF MDSENSDGDD DDDLELSDDE DDFVENRRQP KRLKIVATKT SKGGQLPMPV QPKRGVSHSD EEYFSGKDSD
0301: VPSDSDFKHI PKKPDRLHQK PVGRSDVAPI SSHNELRTSG RRRTVKKISY AESEESDDSE EKSNKRQKLI KEEPEEEDGE TIEKVLWHQP KGVAEEAIRN
0401: HRSAQPTVAS LTSDFDQQWD ELEFYIKWKG QSYLHCQWKI LSELQSVSGF KKVINYTKRV SEEQRYKRAL SREEVEVERI FADRVSKADG DDLVPEYLVK
0501: WQGLPYAEST CFSPLVFVIK SSTSVGIQSS LRRLDGQPEW LKAGKLRDYQ LEGLNFLVNG WRNDTNVILA DEMGLGKTIQ SVSMLGFLHN AQEINGPFLV
0601: VVPLSTLSNW AKEFRKWLPN MNVVVYVGNR ASREMCQQHE FFSDKKGGRH VKFHTLITTY EVILKDKAVL SKIKWNYLMV DEAHRLKNCE ASLYTTLLEF
0701: STKNKLLITG TPLQNSVEEL WALLHFLDPV KFNSKDSFVE RYKNLSSFNE TELANLHKEL RPHILRRVIK DVEKSLPPKI ERILRVEMSP LQKQYYKWIL
0801: ERNFQNLNKG VRGNQLFQLA HLGIECNLAV SDLDWNNVTI LSHLLLLGQA VPHLLLLAQE VSHLAVHYLS NWSMGKATRQ DLAVVSLLNI VVELKKCCNH
0901: PFLFESADHG YGGDSIGDRN KVERIVMSSG KLVLLDKLLV RLRETNHRVL IFSQGLFSVV WFGSNPHYGC PKRESKKMVK MLDILAEYLS LRGFQFQRLD
1001: GSTRADLRHQ AMEHFNAPGS DDFCFLLSTR AGGLGINLAT ADTVIIFDSD WNPQNDLQVL DHLVIQKLNA EGRLEKKESK KGGPIFDKNE LSAILRFGAE
1101: ELFKEDKTDE ETKRNLESLD IDEILERAEK VETKGGEGEE GNELLSAFKA CDVANFSSVE DDATFWSRLI QPDPADIVQE TLAPRAARNK KSYIEDPQLD
1201: KNNNRKRRAV ETQEKPRRLS GRTVETVNSL PLVDGAVAQV REWSFGNVPK KDASRFVRAV KKFGNATQIG LIVDDVGGVL AKVPHEAQIE LFDLLVDGCQ
1301: EAVKENTDIK GTVLDFFGVA VKAYELLARV EELQFLAKRI ARYKDPIKQY RIQLPYKKPQ WSASCGWTET DDARLMVGIH WYGYGNWEKI RLDPKLGLTT
1401: KIAPATLGER ETFLPRAPNL DNRASALLQK EYAKFSGKSL KVKGNTRQTV NNDSNSGVRS MRGRQKDVPE KDDNKPNKDD IQKRRVIVEA EAREEGEISE
1501: SEAETRYRQD KEEKWLEWCS EVLDEEQETL KRLDRLQNTS VNLPKEKVLS RIRKYLLIIG DKIGEVVRQH SESYRQSRMV MRLWNYVATF SNMSGEQLHD
1601: LYMKLSQDQL EGGVGPSHGG NFTSIPPNKG GNSNQLHPSR NQRPTRSLQY NSESFHNESS GSSEAWKRRR RADTDNQFDT QPLCQPPIMT NGNRLQESSS
1701: SAGILGWGPV EIRRYGNERP KRAVHPSHFP TGHGPLL
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.