Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 95.95 | 94.5 |
| Zm00001d006798_P002 | Maize | nucleus | 91.26 | 90.77 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 68.65 | 84.29 |
| Os05t0144300-01 | Rice | nucleus | 82.97 | 81.65 |
| TraesCS1B01G106900.4 | Wheat | nucleus | 80.54 | 78.77 |
| TraesCS1D01G089200.2 | Wheat | nucleus | 80.36 | 78.45 |
| Solyc01g079690.2.1 | Tomato | nucleus | 58.38 | 65.13 |
| KRH27613 | Soybean | nucleus | 61.71 | 64.44 |
| KRH35559 | Soybean | nucleus | 62.16 | 64.37 |
| KRG91253 | Soybean | nucleus | 62.07 | 64.21 |
| VIT_05s0020g02960.t01 | Wine grape | nucleus | 63.42 | 63.83 |
| AT3G06010.1 | Thale cress | nucleus | 59.73 | 60.16 |
| CDY18840 | Canola | nucleus | 58.65 | 60.11 |
| Bra040237.1-P | Field mustard | nucleus | 58.83 | 59.36 |
| AT5G19310.1 | Thale cress | nucleus | 56.58 | 59.02 |
| GSMUA_Achr6P20210_001 | Banana | nucleus | 66.76 | 50.55 |
| GSMUA_Achr8P06840_001 | Banana | nucleus | 59.28 | 47.68 |
| Zm00001d007978_P003 | Maize | cytosol | 22.52 | 31.73 |
| Zm00001d033827_P006 | Maize | cytosol | 23.15 | 30.31 |
| Zm00001d040831_P021 | Maize | nucleus | 25.77 | 25.54 |
| Zm00001d009312_P028 | Maize | nucleus | 25.77 | 25.31 |
| Zm00001d048552_P005 | Maize | cytosol | 18.47 | 22.68 |
| Zm00001d002656_P002 | Maize | nucleus | 18.92 | 21.45 |
| Zm00001d015595_P001 | Maize | cytosol | 3.33 | 18.78 |
| Zm00001d045109_P008 | Maize | cytosol | 22.52 | 18.74 |
| Zm00001d022405_P051 | Maize | nucleus | 26.22 | 16.88 |
| Zm00001d029180_P002 | Maize | nucleus | 23.06 | 16.79 |
| Zm00001d047471_P002 | Maize | nucleus | 23.06 | 16.34 |
| Zm00001d014977_P002 | Maize | nucleus | 30.27 | 15.53 |
| Zm00001d007089_P003 | Maize | nucleus | 24.14 | 15.43 |
| Zm00001d051507_P007 | Maize | nucleus | 24.05 | 12.95 |
| Zm00001d017660_P021 | Maize | nucleus | 23.87 | 12.85 |
| Zm00001d006428_P002 | Maize | nucleus | 23.96 | 12.15 |
| Zm00001d021541_P002 | Maize | nucleus | 24.14 | 12.04 |
| Zm00001d037346_P007 | Maize | nucleus | 31.8 | 9.26 |
Protein Annotations
| MapMan:12.4.1.1.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6J209 | ProteinID:AQK42098.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0042393 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF14619 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF873 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM01314 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| InterPro:SnAC | UniParc:UPI000844E294 | EnsemblPlantsGene:Zm00001d024816 | EnsemblPlants:Zm00001d024816_P007 | EnsemblPlants:Zm00001d024816_T007 | SEG:seg |
Description
chromatin complex subunit A
Coordinates
chr10:-:89407915..89426830
Molecular Weight (calculated)
126987.0 Da
IEP (calculated)
6.354
GRAVY (calculated)
-0.624
Length
1110 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAASVDAAAA LAVTPPAVEE AGGAVEQART LIGALNLLSR NLPLPPDVLR AVSSIYHDGG AGDDEEEEGG EREAEKEGNM EMTAAEEGYP VDVATKGSSL
0101: IEELEDAIYK NKKTPISYSE LAALKEGRFN ASIQHRLAEL EGLPSTRGED LQMKCLLEMY GLKLLDLQKK VRSDISAEYW LQKKCAYPER QLFDWGLMRI
0201: RYPLSMYGIG DILSMDADDV HRKKRFTERM SRLEEEEKNQ ADIRKRKFFA EILNASREHQ VQLGTTFKQR KQRNDGVQAW HVRARQRISR QEKNRLNLLK
0301: IGDQVAYMKM VEESKNERLK MLLDKTNELL EGIGKAVQRQ KDAEHVSQHE GSEVPKGSES EDCSQISGVK SESPGESPSD DDADFAGSAD ESKFNAGRRL
0401: DFTVHSIEEK VTEQPSALEG GELRPYQLEG LQWMLSLFNN NLNGILADEM GLGKTIQTIA LIAYLLENKE VAGPHLIIAP KAVLPNWSNE FKTWAPSIGT
0501: ILYDGRPEER KLLREKNFDG LQFNVLLTHY DLILKDKKFL KKVHWHYLIV DEGHRLKNHE CALARTLVSG YQIRRRLLLT GTPIQNSLQE LWSLLNFILP
0601: NIFNSSQNFE EWFNAPFACD VSLNDEEQLL IIHRLHQVLR PFLLRRKKDE VEKYLPVKTQ VILKCDMSAW QKAYYEQVTS REKVALGFGL RSKALQNLSM
0701: QLRKCCNHPY LFVEHYNMYQ REEIVRASGK FELLDRLLPK LQRAGHRVLL FSQMTKLLDV LEIYLQMYNF KYMRLDGSTK TEERGRLLAD FNKKDSEYFM
0801: FLLSTRAGGL GLNLQTADTV IIFDSDWNPQ MDQQAEDRAH RIGQKNEVRV FVLVSVGSIE EEILDRAKQK MGIDAKVIQA GLFNTTSTAQ DRRALLQEIL
0901: RRGTSSLGTD IPSEREINRL AARTDEEFWL FEKMDEERRL RENYKSRLMD GNEVPDWVFA NNDLPKRTVA DEFQNIMVGA KRRRKEVVYS DSFGDQWMKS
1001: DEGFEDIPKA TQRSKKTAYS SDIQVEFSER RKRPRSVENS ADGVSNPTWT PDKGRAGVSS YSKDETEDDG EDEVITSGLQ KGNSFTWNTL GRRRSSHFSS
1101: SSDSRGRPTF
0101: IEELEDAIYK NKKTPISYSE LAALKEGRFN ASIQHRLAEL EGLPSTRGED LQMKCLLEMY GLKLLDLQKK VRSDISAEYW LQKKCAYPER QLFDWGLMRI
0201: RYPLSMYGIG DILSMDADDV HRKKRFTERM SRLEEEEKNQ ADIRKRKFFA EILNASREHQ VQLGTTFKQR KQRNDGVQAW HVRARQRISR QEKNRLNLLK
0301: IGDQVAYMKM VEESKNERLK MLLDKTNELL EGIGKAVQRQ KDAEHVSQHE GSEVPKGSES EDCSQISGVK SESPGESPSD DDADFAGSAD ESKFNAGRRL
0401: DFTVHSIEEK VTEQPSALEG GELRPYQLEG LQWMLSLFNN NLNGILADEM GLGKTIQTIA LIAYLLENKE VAGPHLIIAP KAVLPNWSNE FKTWAPSIGT
0501: ILYDGRPEER KLLREKNFDG LQFNVLLTHY DLILKDKKFL KKVHWHYLIV DEGHRLKNHE CALARTLVSG YQIRRRLLLT GTPIQNSLQE LWSLLNFILP
0601: NIFNSSQNFE EWFNAPFACD VSLNDEEQLL IIHRLHQVLR PFLLRRKKDE VEKYLPVKTQ VILKCDMSAW QKAYYEQVTS REKVALGFGL RSKALQNLSM
0701: QLRKCCNHPY LFVEHYNMYQ REEIVRASGK FELLDRLLPK LQRAGHRVLL FSQMTKLLDV LEIYLQMYNF KYMRLDGSTK TEERGRLLAD FNKKDSEYFM
0801: FLLSTRAGGL GLNLQTADTV IIFDSDWNPQ MDQQAEDRAH RIGQKNEVRV FVLVSVGSIE EEILDRAKQK MGIDAKVIQA GLFNTTSTAQ DRRALLQEIL
0901: RRGTSSLGTD IPSEREINRL AARTDEEFWL FEKMDEERRL RENYKSRLMD GNEVPDWVFA NNDLPKRTVA DEFQNIMVGA KRRRKEVVYS DSFGDQWMKS
1001: DEGFEDIPKA TQRSKKTAYS SDIQVEFSER RKRPRSVENS ADGVSNPTWT PDKGRAGVSS YSKDETEDDG EDEVITSGLQ KGNSFTWNTL GRRRSSHFSS
1101: SSDSRGRPTF
0001: MVAQQLQERC GGTSQEDPVE TTKSLICALN YISRDLPLPP HLFTAVSSIY HGASSSSLSD SDVSPPLPTS PPANKAPYGA DLMGEFEDAL LKQRPDCESG
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
Arabidopsis Description
CHR12Probable ATP-dependent DNA helicase CHR12 [Source:UniProtKB/Swiss-Prot;Acc:F4J9M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.