Factsheet for Zm00001d040831_P021

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32501	Sorghum	nucleus	95.8	96.93
Zm00001d009312_P028	Maize	nucleus	95.54	94.69
Os01t0367900-01	Rice	nucleus	91.16	92.23
CDY47176	Canola	cytosol	37.05	87.55
KRH21031	Soybean	nucleus	80.54	84.54
KRH11241	Soybean	nucleus	80.54	84.14
VIT_05s0020g01780.t01	Wine grape	nucleus	80.8	83.8
KRH50913	Soybean	nucleus	78.93	83.55
PGSC0003DMT400079102	Potato	nucleus	78.57	83.18
CDY18857	Canola	nucleus	77.77	83.03
GSMUA_Achr3P23910_001	Banana	nucleus	79.2	82.97
Solyc06g054560.2.1	Tomato	nucleus	78.57	82.94
Bra040221.1-P	Field mustard	nucleus	77.68	82.94
KRH02212	Soybean	nucleus	78.3	82.81
AT3G06400.3	Thale cress	nucleus	77.77	82.4
PGSC0003DMT400058376	Potato	nucleus	77.86	81.95
CDY24695	Canola	nucleus	76.7	81.58
Solyc01g067390.2.1	Tomato	nucleus	77.41	81.41
Bra020751.1-P	Field mustard	nucleus	76.43	81.29
AT5G18620.2	Thale cress	nucleus	77.5	80.97
TraesCS3D01G068900.1	Wheat	nucleus	80.27	80.2
TraesCS3B01G083400.1	Wheat	nucleus	80.89	79.89
CDX92595	Canola	nucleus	63.66	79.75
TraesCS3A01G069900.2	Wheat	nucleus	80.36	79.65
CDY13907	Canola	nucleus	75.0	79.32
Bra002173.1-P	Field mustard	nucleus	75.18	79.14
HORVU3Hr1G012850.1	Barley	nucleus	78.66	77.76
CDY02609	Canola	nucleus	72.23	76.68
CDY05261	Canola	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	76.96	76.08
Bra023689.1-P	Field mustard	nucleus	73.93	75.2
Zm00001d007978_P003	Maize	cytosol	23.12	32.87
Zm00001d033827_P006	Maize	cytosol	23.75	31.37
Zm00001d006798_P002	Maize	nucleus	25.71	25.81
Zm00001d024816_P007	Maize	cytosol	25.54	25.77
Zm00001d048552_P005	Maize	cytosol	20.45	25.33
Zm00001d045109_P008	Maize	cytosol	24.73	20.76
Zm00001d022405_P051	Maize	nucleus	31.34	20.36
Zm00001d002656_P002	Maize	nucleus	17.05	19.51
Zm00001d007089_P003	Maize	nucleus	29.38	18.94
Zm00001d029180_P002	Maize	nucleus	22.32	16.39
Zm00001d047471_P002	Maize	nucleus	22.77	16.27
Zm00001d015595_P001	Maize	cytosol	2.86	16.24
Zm00001d051507_P007	Maize	nucleus	25.0	13.59
Zm00001d017660_P021	Maize	nucleus	25.0	13.58
Zm00001d014977_P002	Maize	nucleus	25.0	12.95
Zm00001d021541_P002	Maize	nucleus	25.0	12.58
Zm00001d006428_P002	Maize	nucleus	24.46	12.51
Zm00001d037346_P007	Maize	nucleus	26.34	7.74

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.1040.30	EntrezGene:103650180	MapMan:12.4.1.1.4	Gene3D:3.40.50.10810	Gene3D:3.40.50.300
UniProt:A0A1D6MT91	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003682	GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0006338	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016589	GO:GO:0016787
GO:GO:0016818	GO:GO:0016887	GO:GO:0031491	GO:GO:0043044	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:Homeobox-like_sf	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR017884	InterPro:IPR036306	InterPro:IPR038718
InterPro:ISWI	InterPro:ISWI_HAND-dom	InterPro:ISWI_HAND-dom_sf	ProteinID:ONM32126.1	InterPro:P-loop_NTPase	PFAM:PF00176
PFAM:PF00271	PFAM:PF09110	PFAM:PF09111	PFscan:PS51192	PFscan:PS51194	PFscan:PS51293
PANTHER:PTHR10799	PANTHER:PTHR10799:SF887	InterPro:SANT/Myb	InterPro:SANT_dom	InterPro:SLIDE	SMART:SM00487
SMART:SM00490	SMART:SM00717	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF101224	SUPFAM:SSF46689
SUPFAM:SSF52540	UniParc:UPI0008426614	EnsemblPlantsGene:Zm00001d040831	EnsemblPlants:Zm00001d040831_P021	EnsemblPlants:Zm00001d040831_T021	SEG:seg

Description

ISWI chromatin-remodeling complex ATPase CHR11

Coordinates

chr3:-:68534741..68545191

Molecular Weight (calculated)

129384.0 Da

IEP (calculated)

4.938

GRAVY (calculated)

-0.827

Length

1120 amino acids

Sequence
(BLAST)

0001: MAKPVKYDDE EEISSSSAEE DDDQSAAAAS GSGEEGDDDE EDAAALPTEE EEAEGEGQQE EEVDEEEIEA VTTGAGAEDG EDASAATAAE GEEESQSTED
0101: DESVARDKDN GDETDAVVGK REKTRLKELQ KMKKQKIQEI LDTQNAAIDA DMNNKGKGRL KYLLQQTEIF AHFAKGSQSN EKKPRGRGRH ASKMTEEEED
0201: EEYLKEEEDA LAGAGGTRLV SQPSCIKGKM RDYQLAGLNW LIRLYENGIN GILADEMGLG KTLQTISLLG YLHEFRGIAG PHMVVAPKST LGNWMKEIQR
0301: FCPILRAVKF LGNPEERNHI RDNLLQPGKF DVCVTSFEMA IKEKSALRRF SWRYIIIDEA HRIKNENSLL SKTMRIYNTN YRLLITGTPL QNNLHELWAL
0401: LNFLLPEIFS SAETFDEWFQ ISGENDQQEV VQQLHKVLRP FLLRRLKSDV EKGLPPKKET ILKVGMSQMQ KQYYRALLQK DLEVINAGGE RKRLLNIAMQ
0501: LRKCCNHPYL FQGAEPGPPY TTGEHLIENA GKMVLLDKLL PKLKERDSRV LIFSQMTRLL DILEDYLMYR GYQYCRIDGN TGGEDRDASI EAFNSPGSEK
0601: FVFLLSTRAG GLGINLATAD VVVLYDSDWN PQADLQAQDR AHRIGQKKEV QVFRFCTEYT IEEKVIERAY KKLALDALVI QQGRLAEQKT VNKDDLLQMV
0701: RFGAEMVFSS KDSTITDEDI DRIIAKGEET TAELDAKMKK FTEDAIKFKM DDNAELYDFD DEKDENKVDF KKLVSDNWIE PPRRERKRNY SESDYFKQAL
0801: RQGAPAKPRE PRIPRMPHLH DFQFFNNQRL NELYEKEVRY LMQANQKKDT IDGEDEDQLE PLTAEEQEEK EQLLEEGFAS WTRRDFNTFI RACEKYGRND
0901: IKSISSEMEG KTEEEVQRYA RVFKERYKEL SDYDRIIKNI ERGEARISRK DEIMKAIGKK LDRYKNPWLE LKIQYGQNKG KFYNEECDRF MLCMVHKLGY
1001: GNWDELKAAF RMSPLFRFDW FVKSRTTQEL ARRCDTLIRL VEKENQEYDE QERQARKEKR LAKNMTPTKR AALKNSEGEN TPPSSFKRRR QSLMDDYVGS
1101: FLICFRESVR EADHVWHPPL

Best Arabidopsis Sequence Match ( AT3G06400.1 )
(BLAST)

0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR

Arabidopsis Description

CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.