Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92590 | Sorghum | nucleus | 82.83 | 92.38 |
| Zm00001d029180_P002 | Maize | nucleus | 84.81 | 87.15 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 76.52 | 80.25 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 76.45 | 80.08 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 76.45 | 80.08 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 76.01 | 78.3 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 56.48 | 60.53 |
| KRH33202 | Soybean | nucleus | 53.8 | 57.78 |
| Solyc04g016370.2.1 | Tomato | nucleus | 55.9 | 56.92 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 56.41 | 56.78 |
| KRH66858 | Soybean | nucleus | 55.14 | 56.4 |
| KRG95191 | Soybean | nucleus | 54.95 | 56.24 |
| CDX72050 | Canola | cytosol | 52.71 | 56.08 |
| CDY30994 | Canola | nucleus | 22.65 | 55.47 |
| Bra007318.1-P | Field mustard | nucleus | 52.71 | 55.21 |
| Bra014632.1-P | Field mustard | cytosol | 53.22 | 55.09 |
| AT3G57300.2 | Thale cress | cytosol | 53.41 | 54.35 |
| CDX88940 | Canola | nucleus | 53.48 | 50.67 |
| CDY06115 | Canola | nucleus | 53.1 | 44.18 |
| Zm00001d007978_P003 | Maize | cytosol | 13.98 | 27.79 |
| Zm00001d033827_P006 | Maize | cytosol | 14.04 | 25.94 |
| Zm00001d048552_P005 | Maize | cytosol | 13.47 | 23.34 |
| Zm00001d024816_P007 | Maize | cytosol | 16.34 | 23.06 |
| Zm00001d006798_P002 | Maize | nucleus | 16.34 | 22.94 |
| Zm00001d040831_P021 | Maize | nucleus | 16.27 | 22.77 |
| Zm00001d009312_P028 | Maize | nucleus | 16.4 | 22.74 |
| Zm00001d015595_P001 | Maize | cytosol | 2.81 | 22.34 |
| Zm00001d002656_P002 | Maize | nucleus | 13.72 | 21.96 |
| Zm00001d045109_P008 | Maize | cytosol | 15.12 | 17.77 |
| Zm00001d017660_P021 | Maize | nucleus | 20.55 | 15.62 |
| Zm00001d051507_P007 | Maize | nucleus | 20.29 | 15.43 |
| Zm00001d022405_P051 | Maize | nucleus | 16.34 | 14.85 |
| Zm00001d007089_P003 | Maize | nucleus | 14.81 | 13.36 |
| Zm00001d014977_P002 | Maize | nucleus | 17.36 | 12.58 |
| Zm00001d006428_P002 | Maize | nucleus | 16.02 | 11.46 |
| Zm00001d021541_P002 | Maize | nucleus | 16.15 | 11.37 |
| Zm00001d037346_P007 | Maize | nucleus | 16.66 | 6.85 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6PA70 | ProteinID:AQL06628.1 | ncoils:Coil |
| InterPro:DBINO | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Glycosyl_hydrolases_36 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF05691 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0008435FB7 | EnsemblPlantsGene:Zm00001d047471 | EnsemblPlants:Zm00001d047471_P002 | EnsemblPlants:Zm00001d047471_T002 |
| SEG:seg | : | : | : | : | : |
Description
DNA helicase INO80
Coordinates
chr9:-:131188483..131205097
Molecular Weight (calculated)
178836.0 Da
IEP (calculated)
7.772
GRAVY (calculated)
-0.522
Length
1567 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFNADDVVKE CVVTSGAGGR AMALRSMGRG CGLFSAYYSQ EPVRCLLDMV EVEFSYDVDI DLVFVDLPVL EQERYQWTLE IVPLLNFRVP VPEDLARYEN
0101: SSSNGSPSSE GQGSLLDQYN GVNDASHGLH RKRKRHLDGA SDDDEADAYS NKITEEQYRA MLSEHVQKYR RSKFKEGAFS SDPPRVATPQ LKHKNGGKKN
0201: MKRISDFSDD VALDGIEASH EYNGIECIKT HGGFNKLVAT LDSTYLDMGD STRYLVPEGY DKLASSLNLP VSSDIRVEEH FLKGMLDLRT LAAMLGTDQR
0301: FEASNRGGIS EPLPQFESLK ERVKVQEFSL QVTKDPFAIP EGSAGRIRRY IISEAGDLQV HYVRVMEKGD TYEIIERSLP KKQIVKKEPS VIMKEESEKT
0401: YKLWQSLATK SIPKHHKNFT ALIKKRQVDA KRFSDSCQRE VKLKVSRSLK LMRCAAVRTR KFVKDMQMFW KRVDKEQYEL RKKEEKEAAE ALKREEELRE
0501: AKRQQHRLNF LLSQTELYSH FMQNKTGGSA PPDEEDVPDE EDPEEAQLKR EALRAAQHAV SQQKMKTNAF DSEIVRLRQT SDSALPTDDS SSMDPSKIDL
0601: LHPSTMPETS SVQTPELFKG VLKEYQLKGL QWLVNCYEQG LNGILADEMG LGKTVQAMAF LSHLAEDKNI WGPFLVVAPA SVVNNWAEEL IRFCPDLKIL
0701: PYWGPERMIL RKNINPKRLY RRDASFHILI TNYQILVNEE KLLRRVKWQY MVLDEAQAIK SSSSQRWKTL LSFNCRNRLL LTGTPIQNNM AELWALLHFI
0801: MPTLFDSHEQ FNEWFSKGIE GHAEHGGALN EHQLSRLHAI LKPFMLRRVK IDVIAEMTKK KEEIVPCKLS SRQQVFYQAI KNKISLNELL AGSRGSLNDK
0901: KLLSLMNIVM QLRKVCNHPE LFERNEGSSY FNFAEIPNSL LSPPFGELQD VHYAGKRNPI IFEIPKLVYE GIISNMENSG NICGFQNGYL NRLFNIFLPS
1001: NIYRSAIPEV SSSKESLLSS GAFGFTRLSN LCPVEASFLA TASLFERLVF SVMQWNMNYT AEILDEFLDS EDTGIQSSHN DSTKVRAVAR LLLSSTKVKP
1101: SLLRTKIGTG PIDGPYEALV LSHRDRLASN IRLLRSAYAF IPPARAPPIN VWCADRNFAY KFTDEMYDPW AKKLFLGFAR TSEFNGPRQP IAPHPLIQEL
1201: NTDLPIIEPM LQLPYRIFGS SPPMSNFDPA KMLTDSGKLH TLDMLLRRLR AEGHRVLLFA QMTKMLDILE DYMNFRKFKY FRLDGSSAIS DRRDMVRDFQ
1301: NRNDIFVFLL STRAGGLGIN LTAADTVIFY EIDWNPTQDQ QAMDRTHRLG QTKEVTETSV YANLTNCCSI IFMVNLFHIS KVTVYRLICK DTIEEKILQR
1401: AKQKNAVQEL VMKGKHVQDD HLMRQEDVVS LLIDDTQIAH KLKEISMQAK DRQKRRRAKG IKVDKEGDLT LEDLDDATAE AVDQDKTTSK KKKSSHKKHT
1501: NSHDNDNIDK NGEADVGDHP GSSNTENEQM PESRPKRSKR LMKSITDDKE LAAAADHEKP VNEAENH
0101: SSSNGSPSSE GQGSLLDQYN GVNDASHGLH RKRKRHLDGA SDDDEADAYS NKITEEQYRA MLSEHVQKYR RSKFKEGAFS SDPPRVATPQ LKHKNGGKKN
0201: MKRISDFSDD VALDGIEASH EYNGIECIKT HGGFNKLVAT LDSTYLDMGD STRYLVPEGY DKLASSLNLP VSSDIRVEEH FLKGMLDLRT LAAMLGTDQR
0301: FEASNRGGIS EPLPQFESLK ERVKVQEFSL QVTKDPFAIP EGSAGRIRRY IISEAGDLQV HYVRVMEKGD TYEIIERSLP KKQIVKKEPS VIMKEESEKT
0401: YKLWQSLATK SIPKHHKNFT ALIKKRQVDA KRFSDSCQRE VKLKVSRSLK LMRCAAVRTR KFVKDMQMFW KRVDKEQYEL RKKEEKEAAE ALKREEELRE
0501: AKRQQHRLNF LLSQTELYSH FMQNKTGGSA PPDEEDVPDE EDPEEAQLKR EALRAAQHAV SQQKMKTNAF DSEIVRLRQT SDSALPTDDS SSMDPSKIDL
0601: LHPSTMPETS SVQTPELFKG VLKEYQLKGL QWLVNCYEQG LNGILADEMG LGKTVQAMAF LSHLAEDKNI WGPFLVVAPA SVVNNWAEEL IRFCPDLKIL
0701: PYWGPERMIL RKNINPKRLY RRDASFHILI TNYQILVNEE KLLRRVKWQY MVLDEAQAIK SSSSQRWKTL LSFNCRNRLL LTGTPIQNNM AELWALLHFI
0801: MPTLFDSHEQ FNEWFSKGIE GHAEHGGALN EHQLSRLHAI LKPFMLRRVK IDVIAEMTKK KEEIVPCKLS SRQQVFYQAI KNKISLNELL AGSRGSLNDK
0901: KLLSLMNIVM QLRKVCNHPE LFERNEGSSY FNFAEIPNSL LSPPFGELQD VHYAGKRNPI IFEIPKLVYE GIISNMENSG NICGFQNGYL NRLFNIFLPS
1001: NIYRSAIPEV SSSKESLLSS GAFGFTRLSN LCPVEASFLA TASLFERLVF SVMQWNMNYT AEILDEFLDS EDTGIQSSHN DSTKVRAVAR LLLSSTKVKP
1101: SLLRTKIGTG PIDGPYEALV LSHRDRLASN IRLLRSAYAF IPPARAPPIN VWCADRNFAY KFTDEMYDPW AKKLFLGFAR TSEFNGPRQP IAPHPLIQEL
1201: NTDLPIIEPM LQLPYRIFGS SPPMSNFDPA KMLTDSGKLH TLDMLLRRLR AEGHRVLLFA QMTKMLDILE DYMNFRKFKY FRLDGSSAIS DRRDMVRDFQ
1301: NRNDIFVFLL STRAGGLGIN LTAADTVIFY EIDWNPTQDQ QAMDRTHRLG QTKEVTETSV YANLTNCCSI IFMVNLFHIS KVTVYRLICK DTIEEKILQR
1401: AKQKNAVQEL VMKGKHVQDD HLMRQEDVVS LLIDDTQIAH KLKEISMQAK DRQKRRRAKG IKVDKEGDLT LEDLDDATAE AVDQDKTTSK KKKSSHKKHT
1501: NSHDNDNIDK NGEADVGDHP GSSNTENEQM PESRPKRSKR LMKSITDDKE LAAAADHEKP VNEAENH
0001: MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
Arabidopsis Description
PIE1Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.