Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014632.1-P | Field mustard | cytosol | 86.7 | 94.72 |
| CDX72050 | Canola | cytosol | 77.75 | 87.3 |
| CDY30994 | Canola | nucleus | 33.13 | 85.62 |
| AT3G57300.2 | Thale cress | cytosol | 75.57 | 81.17 |
| CDY06115 | Canola | nucleus | 78.42 | 68.88 |
| KRH33202 | Soybean | nucleus | 58.1 | 65.87 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 61.43 | 65.25 |
| KRG95191 | Soybean | nucleus | 60.28 | 65.12 |
| KRH66858 | Soybean | nucleus | 60.22 | 65.01 |
| Solyc04g016370.2.1 | Tomato | nucleus | 58.4 | 62.77 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 53.57 | 60.6 |
| OQU92590 | Sorghum | nucleus | 49.64 | 58.43 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 51.09 | 56.56 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 51.15 | 56.55 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 50.85 | 56.22 |
| Zm00001d029180_P002 | Maize | nucleus | 51.33 | 55.67 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 50.91 | 55.36 |
| Zm00001d047471_P002 | Maize | nucleus | 50.67 | 53.48 |
| CDY47176 | Canola | cytosol | 11.79 | 41.14 |
| CDY53848 | Canola | cytosol | 13.91 | 29.83 |
| CDY30755 | Canola | cytosol | 13.85 | 29.59 |
| CDY57125 | Canola | cytosol | 13.66 | 29.5 |
| CDX81370 | Canola | cytosol | 13.6 | 29.37 |
| CDY04120 | Canola | cytosol | 13.0 | 28.29 |
| CDY48619 | Canola | nucleus, plastid | 13.06 | 28.24 |
| CDX92595 | Canola | nucleus | 14.51 | 26.85 |
| CDX74702 | Canola | cytosol | 13.42 | 25.52 |
| CDY18960 | Canola | cytosol | 13.36 | 25.43 |
| CDY18857 | Canola | nucleus | 15.11 | 23.83 |
| CDY18840 | Canola | nucleus | 15.48 | 23.64 |
| CDY24695 | Canola | nucleus | 14.99 | 23.55 |
| CDY13907 | Canola | nucleus | 14.75 | 23.04 |
| CDY02609 | Canola | nucleus | 14.27 | 22.37 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 15.05 | 21.98 |
| CDX75208 | Canola | cytosol | 13.66 | 18.9 |
| CDX68802 | Canola | cytosol | 13.78 | 18.78 |
| CDY56279 | Canola | cytosol | 14.09 | 17.35 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 14.27 | 17.15 |
| CDY67658 | Canola | cytosol, nucleus | 10.7 | 15.68 |
| CDY52874 | Canola | nucleus | 19.04 | 15.62 |
| CDY08401 | Canola | nucleus | 18.86 | 15.56 |
| CDY37209 | Canola | nucleus | 14.63 | 14.35 |
| CDX81444 | Canola | nucleus | 14.69 | 14.35 |
| CDY68094 | Canola | nucleus | 10.7 | 14.19 |
| CDY27338 | Canola | nucleus, plastid | 17.05 | 13.4 |
| CDY37083 | Canola | plastid | 17.05 | 13.37 |
| CDX83383 | Canola | nucleus, plastid | 16.57 | 12.83 |
| CDX95673 | Canola | cytosol | 7.01 | 11.79 |
| CDX95672 | Canola | plastid | 7.01 | 10.74 |
| CDY14410 | Canola | nucleus | 15.48 | 10.23 |
| CDY07678 | Canola | nucleus | 15.54 | 9.35 |
| CDY71637 | Canola | nucleus | 4.11 | 9.19 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:A0A078DI90 | EnsemblPlants:CDX88940 | ProteinID:CDX88940 |
| ProteinID:CDX88940.1 | ncoils:Coil | InterPro:DBINO | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 |
| GO:GO:0006351 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | EnsemblPlantsGene:GSBRNA2T00149038001 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0004EE80CA | SEG:seg | : | : |
Description
BnaA04g02460D
Coordinates
chrLK031857:+:14011..24325
Molecular Weight (calculated)
188490.0 Da
IEP (calculated)
9.356
GRAVY (calculated)
-0.533
Length
1654 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRSRRSDSR YATLFNLEPL RNFTIPRHED EIENYDETRS NQVANYGNGV KKRKRWIEEA GDDDDDDDHY NQHVTEEHYR SMLEEHVQRL KSSSRESQGN
0101: HTSLMRKSNV GSYRGNGQRG RFYDADAISQ RRGSYRGSAV TPKIAYEPSY LDIGNGVVYK IPPSYDKLVA SLNLPSFSDL HVEDFYLRGA LDLRSLAELL
0201: ASVKRSGARS RNGMGEPRPQ YESLQARVKA LSASNSNPSF SLKVSEDAIN SLIPEGAAGS TARTVLSEGG VLQVHYVKVL EKGDTYEIVE RSLPKKLKVK
0301: NDPAVIEKTE RDKIRKAWIN IVKRDIPKHH RVFTNFYRKQ SIDAKRFADG CQREVRYKVA RSYKLPRSAP IRTRKISRDM LLFWKRFDKQ MAEERKKQEK
0401: EAAEALKREQ ELREAQRQQQ RLNFLIKQTE LYSHFMQNKT DSKPSESLSI ADENLVEDPE EAKMKADALK AAQEAVSKQK KITDAFDTES MKLRQTSDMD
0501: GPSNDVSVSG SGNIDLHNPS TMPATSTVQT PELFKGTLKE YQMKGLQWLV NCYEQGLNGI LADEMGLGKT IQAMAFLAHL AEEKNIWGPF LVVAPASVLN
0601: NWADEISRFC PDLKTLPYWG GLQERTILRK NINPKRMYRR ITWQNYGPCC TSSCQCCLTA MNNLTSGSQE GMTKPFITWV FSVSDSICDA FPVSPRLISS
0701: FGLLRLAWTS ELKMLLLPFC CSVVSATLRR EPFCNGLNGI LADEMGLGKT IQAMAFLAHL AEEKNIWGPF LVVAPASVLN NWADEISRFC PDLKTLPYWG
0801: GLQERTILRK NINPKRMYRR DAGFHILITS YQLLVTDEKY FRRVKWQYMV LDEAQAIKNS TSIRWKTLLS FNCRNRLLLT GTPIQNNMAE LWALLHFIMP
0901: MLFDSHEQFN EWFSRGIENH AEHGGTLNEH QLNRLHAILK PFMLRRLKKD VVSELTTKTE VTVHCKLSSR QQAFYQAIKN KISLAELFDS NRGHFNDKKL
1001: LNLMNIVIQL RKASSHVCNH PELFERNEGS SYLYFGVMSN SLLPPPFGEL EDVHYSGGQN PITYKIPKLL QKEMLQSSET FCSSIRRGLS RESFLKHFNI
1101: YSPEYILRSI FSSDSSVDQA VSGSGAFGFS RLMDLSPSEV GYLALCSAME RLLFSILKWE RQFLDVILDS VMEFVDDDLS GGNITRRKTR AVTRMLLMPS
1201: KLETSLLKGK RGTRPTCHSL ESLVVSHQDR LLSNIKLLHS TYTFIPKARA PPVSVHCSDR NFAYRTTEEM HQPWFKRLLI GFARTSEANG PRKPNNLPHP
1301: LIQEIDSELP AVQPALQLTH RVFGSCPPMQ SFDPAKLLTD SGKLQTLDIL LKRLRAGNHR VLLFAQMTKM LNILEDYMNY RKYKYLRLDG SSTIMDRRDM
1401: VRDFQQRSDI FVFLLSTRAG GLGINLTAAD TVIFYESDWN PTLDLQAMDR AHRLGQTKDV TVYRLICKET VEEKILHRAS QKNTVQQLVM TGGHVQGDDV
1501: FGTADVVSLL MDDAEAAQLE QKFRELPLQV RDRQKKKQPV KCIRIDAEGD AALEELEDAA ERRDKEQEPS QETEKTKPSN KKRKAAASTP KPRVPPKAKE
1601: EVNEEGDASL QPQRTKRVKR QTKSINESLE PIFSASVTAA NGEVNPSSSN LDAN
0101: HTSLMRKSNV GSYRGNGQRG RFYDADAISQ RRGSYRGSAV TPKIAYEPSY LDIGNGVVYK IPPSYDKLVA SLNLPSFSDL HVEDFYLRGA LDLRSLAELL
0201: ASVKRSGARS RNGMGEPRPQ YESLQARVKA LSASNSNPSF SLKVSEDAIN SLIPEGAAGS TARTVLSEGG VLQVHYVKVL EKGDTYEIVE RSLPKKLKVK
0301: NDPAVIEKTE RDKIRKAWIN IVKRDIPKHH RVFTNFYRKQ SIDAKRFADG CQREVRYKVA RSYKLPRSAP IRTRKISRDM LLFWKRFDKQ MAEERKKQEK
0401: EAAEALKREQ ELREAQRQQQ RLNFLIKQTE LYSHFMQNKT DSKPSESLSI ADENLVEDPE EAKMKADALK AAQEAVSKQK KITDAFDTES MKLRQTSDMD
0501: GPSNDVSVSG SGNIDLHNPS TMPATSTVQT PELFKGTLKE YQMKGLQWLV NCYEQGLNGI LADEMGLGKT IQAMAFLAHL AEEKNIWGPF LVVAPASVLN
0601: NWADEISRFC PDLKTLPYWG GLQERTILRK NINPKRMYRR ITWQNYGPCC TSSCQCCLTA MNNLTSGSQE GMTKPFITWV FSVSDSICDA FPVSPRLISS
0701: FGLLRLAWTS ELKMLLLPFC CSVVSATLRR EPFCNGLNGI LADEMGLGKT IQAMAFLAHL AEEKNIWGPF LVVAPASVLN NWADEISRFC PDLKTLPYWG
0801: GLQERTILRK NINPKRMYRR DAGFHILITS YQLLVTDEKY FRRVKWQYMV LDEAQAIKNS TSIRWKTLLS FNCRNRLLLT GTPIQNNMAE LWALLHFIMP
0901: MLFDSHEQFN EWFSRGIENH AEHGGTLNEH QLNRLHAILK PFMLRRLKKD VVSELTTKTE VTVHCKLSSR QQAFYQAIKN KISLAELFDS NRGHFNDKKL
1001: LNLMNIVIQL RKASSHVCNH PELFERNEGS SYLYFGVMSN SLLPPPFGEL EDVHYSGGQN PITYKIPKLL QKEMLQSSET FCSSIRRGLS RESFLKHFNI
1101: YSPEYILRSI FSSDSSVDQA VSGSGAFGFS RLMDLSPSEV GYLALCSAME RLLFSILKWE RQFLDVILDS VMEFVDDDLS GGNITRRKTR AVTRMLLMPS
1201: KLETSLLKGK RGTRPTCHSL ESLVVSHQDR LLSNIKLLHS TYTFIPKARA PPVSVHCSDR NFAYRTTEEM HQPWFKRLLI GFARTSEANG PRKPNNLPHP
1301: LIQEIDSELP AVQPALQLTH RVFGSCPPMQ SFDPAKLLTD SGKLQTLDIL LKRLRAGNHR VLLFAQMTKM LNILEDYMNY RKYKYLRLDG SSTIMDRRDM
1401: VRDFQQRSDI FVFLLSTRAG GLGINLTAAD TVIFYESDWN PTLDLQAMDR AHRLGQTKDV TVYRLICKET VEEKILHRAS QKNTVQQLVM TGGHVQGDDV
1501: FGTADVVSLL MDDAEAAQLE QKFRELPLQV RDRQKKKQPV KCIRIDAEGD AALEELEDAA ERRDKEQEPS QETEKTKPSN KKRKAAASTP KPRVPPKAKE
1601: EVNEEGDASL QPQRTKRVKR QTKSINESLE PIFSASVTAA NGEVNPSSSN LDAN
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.