Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G022450.1 | Barley | nucleus | 30.8 | 92.51 |
| Zm00001d007089_P003 | Maize | nucleus | 88.23 | 87.56 |
| Os07t0660200-01 | Rice | nucleus | 31.61 | 86.37 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 83.47 | 83.28 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 83.29 | 83.1 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 83.29 | 83.1 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 64.5 | 66.19 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 60.73 | 59.39 |
| Solyc12g099910.1.1 | Tomato | nucleus | 58.47 | 59.05 |
| KRH14560 | Soybean | nucleus | 59.74 | 58.39 |
| KRH73568 | Soybean | nucleus | 32.95 | 58.32 |
| Bra037208.1-P | Field mustard | nucleus | 56.21 | 57.47 |
| CDY37209 | Canola | nucleus | 56.15 | 57.41 |
| AT2G13370.2 | Thale cress | nucleus | 57.08 | 57.08 |
| CDX81444 | Canola | nucleus | 56.03 | 57.06 |
| Zm00001d009312_P028 | Maize | nucleus | 20.77 | 31.68 |
| Zm00001d007978_P003 | Maize | cytosol | 14.33 | 31.35 |
| Zm00001d040831_P021 | Maize | nucleus | 20.36 | 31.34 |
| Zm00001d033827_P006 | Maize | cytosol | 14.27 | 29.01 |
| Zm00001d024816_P007 | Maize | cytosol | 16.88 | 26.22 |
| Zm00001d006798_P002 | Maize | nucleus | 16.82 | 25.99 |
| Zm00001d048552_P005 | Maize | cytosol | 12.76 | 24.34 |
| Zm00001d045109_P008 | Maize | cytosol | 18.56 | 23.99 |
| Zm00001d002656_P002 | Maize | nucleus | 11.77 | 20.74 |
| Zm00001d029180_P002 | Maize | nucleus | 14.5 | 16.39 |
| Zm00001d047471_P002 | Maize | nucleus | 14.85 | 16.34 |
| Zm00001d021541_P002 | Maize | nucleus | 20.71 | 16.04 |
| Zm00001d006428_P002 | Maize | nucleus | 20.3 | 15.98 |
| Zm00001d017660_P021 | Maize | nucleus | 17.63 | 14.74 |
| Zm00001d015595_P001 | Maize | cytosol | 1.68 | 14.72 |
| Zm00001d051507_P007 | Maize | nucleus | 17.4 | 14.56 |
| Zm00001d014977_P002 | Maize | nucleus | 16.3 | 12.99 |
| Zm00001d037346_P007 | Maize | nucleus | 18.27 | 8.27 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103633530 | MapMan:12.4.1.1.2 | MapMan:15.3.4.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 |
| Gene3D:3.40.50.300 | UniProt:A0A1D6IMC7 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain | ncoils:Coil |
| InterPro:DUF4208 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006338 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016818 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf | InterPro:IPR000953 | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | ProteinID:ONM60431.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 |
| PFAM:PF09111 | PFAM:PF13907 | PFscan:PS50013 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF952 | InterPro:SLIDE | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01176 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF46689 | SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI0004DEABB4 |
| EnsemblPlantsGene:Zm00001d022405 | EnsemblPlants:Zm00001d022405_P051 | EnsemblPlants:Zm00001d022405_T051 | SEG:seg | : | : |
Description
Protein CHROMATIN REMODELING 5
Coordinates
chr7:-:176865496..176884518
Molecular Weight (calculated)
196173.0 Da
IEP (calculated)
5.730
GRAVY (calculated)
-0.844
Length
1724 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFSNSGSK ADSGGYNLNE KAEDEGIYES VQDGNVDLSS RQWNLNEKAD DAYHCEAEQY EAGQSGLYSS EKASGQHIQK GGRSSGGPWG TNFLKDSRSK
0101: QMAEDVPSNS GRGMNAASLH DGLDDSGEDD ELNRANGEVP AEEMLSDDYY EQDGEEQIES LHRGGTKQSS CSTSGGAAKS GSRQMKASKY NAYDDDDDDD
0201: YNDENDDDND ADEDDPADVD FEPDSETDKA TDKDKFMDSE NSDGDDDDGL ELSDDDDDFV ENRRQPKRLK IVATKTSKGR KLPMPAQRKR GVSHSDEEYS
0301: SGKDSDLPSD ADFKHRSKRP DRLHQKSVGR SDVAPINSHN ELRTSGRRTV KKISYVESEE SDDSEEKSTK QQKLMKEELE EEDGETIEKV LWHQPKGVAE
0401: EAIKNHQSAQ PTVVSLTSDF DQQWDELEFY IKWKGQSYLH CQWKTLSELQ SVSGFKKVIN YTKRVAEEQR YKRALSREEV EVHDVGKEME LDLIKQYSQV
0501: ERIFADRVSK ADGDDLVPEY LVKWQGLPYA ESTWEKDTDI DFAQDAIDEY KAREAATSIL GKTVDFQRKK SKASLRRLDD QPEWLKAGKL RDYQLEGLNF
0601: LVNGWRNDTN VILADEMGLG KTIQSVSMLG FLHNAQEING PFLVVVPLST LSNWAKEFRK WLPNMNVVIY VGNRASREMC QKHEFFSDKK GGRHVKFHTL
0701: ITTYEVILKD KAVLSKIKWN YLMVDEAHRL KNCEASLYTT LLEFSTKNKL LITGTPLQNS VEELWALLHF LDPVKFNSKD SFVERYKNLS SFNETELANL
0801: HKELRPHILR RVIKDVEKSL PPKIERILRV EMSPLQKQYY KWILERNFQN LNKGVRGNQV SLLNIVVELK KCCNHPFLFE SADHGYGGDS IGDRNKVERI
0901: VMSSGKLVLL DKLLVRLRET NHRVLIFSQM VKMLDILAEY LSLRGFQFQR LDGSTRADLR HQAMEHFNAP GSDDFCFLLS TRAGGLGINL ATADTVIIFD
1001: SDWNPQNDLQ AMSRAHRIGQ QETVNIYRFV TCKSVEEDIL ERAKKKMVLD HLVIQKLNAE GRLEKKESKK GGSIFDKNEL SAILRFGAEE LFKEDKTDEE
1101: AKRNLESLDI DEILERAEKV ETKGGEGEEG NELLSAFKVA NFSSGEDDAT FWSRLIQPDP ADIIQETLAP RAARNKKSYV EDPQFDKNNN RKRRAVEAQE
1201: KPRRRSGRTV ETVNSVPLVD GAVAQVREWS FGNIPKKDAS RFVRAVKKFG NATQIDLIVD DVGGVLEKAP HEAQIELFDL LIDGCQKAVK ENTDIKGTVL
1301: DFFGVAVKAY ELLARVEELQ LLSKRIARYK DPIKQYRIQL PYKKPQWSAS CGWTETDDAR LMVGIHWYGY GNWEKIRLDP KLGLTTKIAP ATLGERETFL
1401: PRAPNLDNRA SALLQKEYAK FSGNSSKVKG NARQTVNNDS NSGARSMRGR QKDAPDKEDN KPNKDDIQKR KVMMEAEARE EGEISESEAE TKYRLDKEEK
1501: WLEWCSEVLN EEQETLKRLD RLQNTSVNLP KEKVLSRIRK YLLIIGDKIG EVVRQHSESY RQSRMTMRLW NYVATFSNMS GEQLHDLYLK LSQDQLEGGV
1601: GPSHGANFTS IPSSKGGNSN QLHPTRNHRP TRSLQYNSES LHNNESSGSS EAWKRRRRAD PDNQFDTQPL YQPPIMTNGN RLQESSSSAG ILGWGPVEMR
1701: RYGNERPKRG VHPSHFPTGH GPLL
0101: QMAEDVPSNS GRGMNAASLH DGLDDSGEDD ELNRANGEVP AEEMLSDDYY EQDGEEQIES LHRGGTKQSS CSTSGGAAKS GSRQMKASKY NAYDDDDDDD
0201: YNDENDDDND ADEDDPADVD FEPDSETDKA TDKDKFMDSE NSDGDDDDGL ELSDDDDDFV ENRRQPKRLK IVATKTSKGR KLPMPAQRKR GVSHSDEEYS
0301: SGKDSDLPSD ADFKHRSKRP DRLHQKSVGR SDVAPINSHN ELRTSGRRTV KKISYVESEE SDDSEEKSTK QQKLMKEELE EEDGETIEKV LWHQPKGVAE
0401: EAIKNHQSAQ PTVVSLTSDF DQQWDELEFY IKWKGQSYLH CQWKTLSELQ SVSGFKKVIN YTKRVAEEQR YKRALSREEV EVHDVGKEME LDLIKQYSQV
0501: ERIFADRVSK ADGDDLVPEY LVKWQGLPYA ESTWEKDTDI DFAQDAIDEY KAREAATSIL GKTVDFQRKK SKASLRRLDD QPEWLKAGKL RDYQLEGLNF
0601: LVNGWRNDTN VILADEMGLG KTIQSVSMLG FLHNAQEING PFLVVVPLST LSNWAKEFRK WLPNMNVVIY VGNRASREMC QKHEFFSDKK GGRHVKFHTL
0701: ITTYEVILKD KAVLSKIKWN YLMVDEAHRL KNCEASLYTT LLEFSTKNKL LITGTPLQNS VEELWALLHF LDPVKFNSKD SFVERYKNLS SFNETELANL
0801: HKELRPHILR RVIKDVEKSL PPKIERILRV EMSPLQKQYY KWILERNFQN LNKGVRGNQV SLLNIVVELK KCCNHPFLFE SADHGYGGDS IGDRNKVERI
0901: VMSSGKLVLL DKLLVRLRET NHRVLIFSQM VKMLDILAEY LSLRGFQFQR LDGSTRADLR HQAMEHFNAP GSDDFCFLLS TRAGGLGINL ATADTVIIFD
1001: SDWNPQNDLQ AMSRAHRIGQ QETVNIYRFV TCKSVEEDIL ERAKKKMVLD HLVIQKLNAE GRLEKKESKK GGSIFDKNEL SAILRFGAEE LFKEDKTDEE
1101: AKRNLESLDI DEILERAEKV ETKGGEGEEG NELLSAFKVA NFSSGEDDAT FWSRLIQPDP ADIIQETLAP RAARNKKSYV EDPQFDKNNN RKRRAVEAQE
1201: KPRRRSGRTV ETVNSVPLVD GAVAQVREWS FGNIPKKDAS RFVRAVKKFG NATQIDLIVD DVGGVLEKAP HEAQIELFDL LIDGCQKAVK ENTDIKGTVL
1301: DFFGVAVKAY ELLARVEELQ LLSKRIARYK DPIKQYRIQL PYKKPQWSAS CGWTETDDAR LMVGIHWYGY GNWEKIRLDP KLGLTTKIAP ATLGERETFL
1401: PRAPNLDNRA SALLQKEYAK FSGNSSKVKG NARQTVNNDS NSGARSMRGR QKDAPDKEDN KPNKDDIQKR KVMMEAEARE EGEISESEAE TKYRLDKEEK
1501: WLEWCSEVLN EEQETLKRLD RLQNTSVNLP KEKVLSRIRK YLLIIGDKIG EVVRQHSESY RQSRMTMRLW NYVATFSNMS GEQLHDLYLK LSQDQLEGGV
1601: GPSHGANFTS IPSSKGGNSN QLHPTRNHRP TRSLQYNSES LHNNESSGSS EAWKRRRRAD PDNQFDTQPL YQPPIMTNGN RLQESSSSAG ILGWGPVEMR
1701: RYGNERPKRG VHPSHFPTGH GPLL
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.