Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35559 | Soybean | nucleus | 85.23 | 84.51 |
| KRG91253 | Soybean | nucleus | 85.14 | 84.34 |
| VIT_05s0020g02960.t01 | Wine grape | nucleus | 78.08 | 75.25 |
| Solyc01g079690.2.1 | Tomato | nucleus | 69.05 | 73.77 |
| CDY18840 | Canola | nucleus | 71.4 | 70.08 |
| AT3G06010.1 | Thale cress | nucleus | 71.87 | 69.33 |
| Bra040237.1-P | Field mustard | nucleus | 71.68 | 69.27 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 57.48 | 67.59 |
| AT5G19310.1 | Thale cress | nucleus | 66.98 | 66.92 |
| Os05t0144300-01 | Rice | nucleus | 65.66 | 61.88 |
| Zm00001d024816_P007 | Maize | cytosol | 64.44 | 61.71 |
| Zm00001d006798_P002 | Maize | nucleus | 64.44 | 61.38 |
| TraesCS1B01G106900.4 | Wheat | nucleus | 65.29 | 61.15 |
| TraesCS1D01G089200.2 | Wheat | nucleus | 65.1 | 60.86 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 64.25 | 60.6 |
| GSMUA_Achr6P20210_001 | Banana | nucleus | 71.5 | 51.84 |
| GSMUA_Achr8P06840_001 | Banana | nucleus | 65.19 | 50.22 |
| KRH76800 | Soybean | cytosol | 22.67 | 31.63 |
| KRH28662 | Soybean | cytosol | 22.58 | 31.45 |
| KRH50913 | Soybean | nucleus | 27.75 | 27.88 |
| KRH21031 | Soybean | nucleus | 27.75 | 27.65 |
| KRH11241 | Soybean | nucleus | 27.85 | 27.61 |
| KRH02212 | Soybean | nucleus | 27.47 | 27.57 |
| KRG89166 | Soybean | nucleus | 19.0 | 26.86 |
| KRH49484 | Soybean | nucleus | 18.91 | 26.66 |
| KRH05279 | Soybean | nucleus | 11.01 | 25.83 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 19.57 | 23.69 |
| KRH02187 | Soybean | nucleus | 26.72 | 20.54 |
| KRH73568 | Soybean | nucleus | 17.4 | 18.99 |
| KRH52357 | Soybean | nucleus | 24.55 | 18.12 |
| KRH61691 | Soybean | nucleus | 24.36 | 17.96 |
| KRH14560 | Soybean | nucleus | 27.94 | 16.84 |
| KRH33202 | Soybean | nucleus | 22.58 | 16.45 |
| KRH66858 | Soybean | nucleus | 23.24 | 16.12 |
| KRG95191 | Soybean | nucleus | 23.14 | 16.07 |
| KRH48113 | Soybean | nucleus | 32.36 | 15.45 |
| KRH40427 | Soybean | nucleus | 32.17 | 15.39 |
| KRH00799 | Soybean | nucleus | 31.89 | 15.26 |
| KRH06623 | Soybean | nucleus | 31.51 | 15.21 |
| KRH71872 | Soybean | nucleus | 27.19 | 14.16 |
| KRH38118 | Soybean | nucleus | 27.09 | 14.06 |
| KRH42374 | Soybean | nucleus | 25.4 | 12.48 |
| KRH58495 | Soybean | nucleus | 25.96 | 11.82 |
| KRH50934 | Soybean | nucleus | 34.24 | 9.61 |
Protein Annotations
| EntrezGene:100775993 | MapMan:12.4.1.1.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02006730 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_11G004100 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0042393 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1LFS4 | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | EnsemblPlants:KRH27613 | ProteinID:KRH27613 | ProteinID:KRH27613.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF14619 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF873 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM01314 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| InterPro:SnAC | UniParc:UPI000233CB68 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:306355..313623
Molecular Weight (calculated)
122746.0 Da
IEP (calculated)
7.586
GRAVY (calculated)
-0.657
Length
1063 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQAVSLIGA LNLVSRNLPL PPDLFDTVSS IYHRSNPLSS EADAPEQDLL ADLQNALLEQ RPNYASASKL NKTRESRYHT QIRHRLTQLQ GLPSSRGEDL
0101: QTMCLLELYG LKLAELQRKV QTDVNSEYWL NVKCAYPDRQ LFDWSMMRLR RPLYGVGDPF SMDADDQIRK KRDAERLSRL EEQAKNHMET RKRRFFAEIL
0201: NAVREFQLQI QAFLKRRKQR NDGVQAWHGR QRQRATRAEK LRFQALKADD QEAYMRMVKE SKNERLTLLL EETNKLLVNL GAAVQRQKDS KQSDGIEPLE
0301: DSETDLPESD GLKNGISKES PLEEDVDLID SDRNGGDTSD LLEGQRQYNS AIHSIQEKVS EQPSILQGGE LRPYQLEGLQ WMLSLFNNNL NGILADEMGL
0401: GKTIQTISLI AYLMEHKGVT GPHLIVAPKA VLPNWINEFS TWAPSITTIL YDGRLDERKA MKEELSGEGK FNVLITHYDL IMRDKAFLKK IHWLYLIVDE
0501: GHRLKNHECA LARTLDSGYH IQRRLLLTGT PIQNSLQELW SLLNFLLPNI FNSVQNFEDW FNAPFADRVD VSLTDEEQLL IIRRLHQVIR PFILRRKKDE
0601: VEKFLPSKSQ VILKCDLSAW QKVYYQQVTD VGRVGLDNGS GKSKSLQNLT MQLRKCCNHP YLFVGDYDIH KHKEEIFRAS GKFELLDRLL PKLRRAGHRV
0701: LLFSQMTRLM DILEIYLRLN DFKFLRLDGS TKTEERGSLL RKFNAPDSAY FMFLLSTRAG GLGLNLQTAD TVIIFDSDWN PQMDQQAEDR AHRIGQKKEV
0801: RVFVLVSVGS IEEVILERAK QKMGIDAKVI QAGLFNTTST AQDRREMLQE IMRRGTSSLG TDVPSEREIN RLAARSDEEF WLFEKMDEER RQKENYRSRL
0901: MEEHELPDWV YSPLNKDDKV KIFDSGSVTG KRKRNEVVYA DTLSDLQWMK AVENGQDISK LSVKGKRRDH LPVDNHAQAS DDMGTEERLF RSEDTFDVTP
1001: ASKRLKPEEI NSQKHENEDV SVGGLNEHIF SWNTRRKKRS GYLGQGSFSD SRGQNSNGRA NWN
0101: QTMCLLELYG LKLAELQRKV QTDVNSEYWL NVKCAYPDRQ LFDWSMMRLR RPLYGVGDPF SMDADDQIRK KRDAERLSRL EEQAKNHMET RKRRFFAEIL
0201: NAVREFQLQI QAFLKRRKQR NDGVQAWHGR QRQRATRAEK LRFQALKADD QEAYMRMVKE SKNERLTLLL EETNKLLVNL GAAVQRQKDS KQSDGIEPLE
0301: DSETDLPESD GLKNGISKES PLEEDVDLID SDRNGGDTSD LLEGQRQYNS AIHSIQEKVS EQPSILQGGE LRPYQLEGLQ WMLSLFNNNL NGILADEMGL
0401: GKTIQTISLI AYLMEHKGVT GPHLIVAPKA VLPNWINEFS TWAPSITTIL YDGRLDERKA MKEELSGEGK FNVLITHYDL IMRDKAFLKK IHWLYLIVDE
0501: GHRLKNHECA LARTLDSGYH IQRRLLLTGT PIQNSLQELW SLLNFLLPNI FNSVQNFEDW FNAPFADRVD VSLTDEEQLL IIRRLHQVIR PFILRRKKDE
0601: VEKFLPSKSQ VILKCDLSAW QKVYYQQVTD VGRVGLDNGS GKSKSLQNLT MQLRKCCNHP YLFVGDYDIH KHKEEIFRAS GKFELLDRLL PKLRRAGHRV
0701: LLFSQMTRLM DILEIYLRLN DFKFLRLDGS TKTEERGSLL RKFNAPDSAY FMFLLSTRAG GLGLNLQTAD TVIIFDSDWN PQMDQQAEDR AHRIGQKKEV
0801: RVFVLVSVGS IEEVILERAK QKMGIDAKVI QAGLFNTTST AQDRREMLQE IMRRGTSSLG TDVPSEREIN RLAARSDEEF WLFEKMDEER RQKENYRSRL
0901: MEEHELPDWV YSPLNKDDKV KIFDSGSVTG KRKRNEVVYA DTLSDLQWMK AVENGQDISK LSVKGKRRDH LPVDNHAQAS DDMGTEERLF RSEDTFDVTP
1001: ASKRLKPEEI NSQKHENEDV SVGGLNEHIF SWNTRRKKRS GYLGQGSFSD SRGQNSNGRA NWN
0001: MVAQQLQERC GGTSQEDPVE TTKSLICALN YISRDLPLPP HLFTAVSSIY HGASSSSLSD SDVSPPLPTS PPANKAPYGA DLMGEFEDAL LKQRPDCESG
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
Arabidopsis Description
CHR12Probable ATP-dependent DNA helicase CHR12 [Source:UniProtKB/Swiss-Prot;Acc:F4J9M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.