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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67658 Canola cytosol, nucleus 48.78 96.01
CDY68094 Canola nucleus 53.29 94.95
AT5G44800.1 Thale cress nucleus 81.82 81.78
VIT_01s0011g01480.t01 Wine grape nucleus 53.11 54.71
KRH42374 Soybean nucleus 51.49 52.87
KRH58495 Soybean nucleus 53.02 50.45
Solyc02g068560.2.1 Tomato nucleus 49.55 46.2
GSMUA_Achr9P11210_001 Banana nucleus 39.56 42.71
KXG36264 Sorghum nucleus 42.03 42.0
Os07t0497100-01 Rice nucleus 42.53 41.83
Zm00001d006428_P002 Maize nucleus 41.22 41.83
TraesCS2B01G251900.1 Wheat nucleus 41.81 41.45
Zm00001d021541_P002 Maize nucleus 41.49 41.44
TraesCS2D01G234200.1 Wheat nucleus 41.81 41.34
TraesCS2A01G227900.1 Wheat nucleus 41.72 41.29
GSMUA_Achr6P29570_001 Banana nucleus 38.97 40.43
Bra012099.1-P Field mustard cytosol 9.9 28.53
Bra040221.1-P Field mustard nucleus 12.69 26.88
Bra020751.1-P Field mustard nucleus 12.74 26.88
Bra011311.1-P Field mustard nucleus 14.63 26.77
Bra007814.1-P Field mustard nucleus 15.98 26.01
Bra002173.1-P Field mustard nucleus 12.38 25.85
Bra017422.1-P Field mustard cytosol 8.69 25.33
Bra023689.1-P Field mustard nucleus 12.06 24.34
Bra040237.1-P Field mustard nucleus 11.75 23.73
Bra004881.1-P Field mustard nucleus 6.62 22.72
Bra037208.1-P Field mustard nucleus 15.35 20.23
Bra037150.1-P Field mustard nucleus 9.72 18.02
Bra014632.1-P Field mustard cytosol 10.94 16.05
Bra007318.1-P Field mustard nucleus 10.17 15.11
Bra034727.1-P Field mustard nucleus 13.01 14.31
Bra039296.1-P Field mustard plastid 13.28 13.8
Bra000409.1-P Field mustard plastid 13.1 13.46
Bra000114.1-P Field mustard nucleus 14.18 9.62
Protein Annotations
Gene3D:1.10.10.60Gene3D:1.20.920.10MapMan:12.4.1.1.5Gene3D:2.40.50.40Gene3D:3.40.50.10810Gene3D:3.40.50.300
EnsemblPlantsGene:Bra027574EnsemblPlants:Bra027574.1EnsemblPlants:Bra027574.1-PInterPro:Bromodomain-like_sfInterPro:Chromo-like_dom_sfInterPro:Chromo/chromo_shadow_dom
InterPro:Chromo_domainInterPro:DUF1087GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0009506GO:GO:0046872InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:Homeobox-like_sf
InterPro:IPR000953InterPro:IPR001650InterPro:IPR014001InterPro:IPR019787InterPro:IPR036427InterPro:IPR038718
UniProt:M4EFL2InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF00385PFAM:PF00628
PFAM:PF06465ScanProsite:PS01359PFscan:PS50013PFscan:PS50016PFscan:PS51192PFscan:PS51194
PANTHER:PTHR10799PANTHER:PTHR10799:SF939SMART:SM00249SMART:SM00298SMART:SM00487SMART:SM00490
SMART:SM01147InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF46689SUPFAM:SSF52540SUPFAM:SSF54160
SUPFAM:SSF57903UniParc:UPI00025426F1InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
SEG:seg:::::
Description
AT5G44800 (E=0.0) CHR4 | CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding
Coordinates
chrA09:+:13249299..13257777
Molecular Weight (calculated)
247600.0 Da
IEP (calculated)
6.591
GRAVY (calculated)
-0.758
Length
2222 amino acids
Sequence
(BLAST)
0001: MTDSGSEMLD RDWVMKQKRR KLPSILDSLD QKEDSSAAAI DSPDKPTKHQ LKAGPTPERT SKRKGQSLPE NNSLAFGSPE HTSSDKLTNQ QPSVDLTPEG
0101: NSSKRKGHDG NYFECVICDL GGDLLCCDSC PRTYHTDCLT PPLKRIPNGK WICPKCSPDS GALKPTTRLD AISKRARTKT SKRNSQDRPK SERASQIYCS
0201: SLVSGEPSSE KGKSISAGES KSIGKEVMDG CSAELGHVSA DDQPDSPVIP TAYPPSSEDL PESKLSNTGK SHEAPVERVP HACSEMVVND TIGEAETGKG
0301: KRKKRKREPN DGETVKECKA DKKRTKKSLS KVGSPKTKTS ESSKKKKKKK NRVTLKSLSK TQSKVEVPEK VKKLSKEERR AIRDADKSSS YLDVKNSIPP
0401: TNLQVDRVLG CRVQDPNKTS LYGALSDDLC SDNLQDNDQR DSTVKDTNAD TVVTEDRTDS SSETGKSSRN SRLKDRDMDE SAVGTECLVD EKEDMVSEDT
0501: FDATVSRHVD NEDKKASEAP VSVDAHHEMG GKIPVAGEEV EEPVAAKAAD LIGETVSYEF LVKWVGKSNI HNSWISEADL KSLARRKLEN YKSKYGTAVI
0601: NICEDKWKQP QRIIALRVSK EGHQEAYVKW TGLAYDECTW ESLEEPIIKE SPHLMDLFQK YERKTLERDI SKGISPRTRG EGQQSEVITL TEQPSELRGG
0701: ALFPHQLEAL NWLRRCWHKS KNVILADEMG LGKTVSASAF LSSLYFEFGV ARPCLVLVPL STMPNWLSEF SLWAPLLNVV EYHGGAKARA IIREFEWHAK
0801: SSTETTKKMK PYKFNVLLTT YEMVLADSSH LRGVPWEVLV VDEGHRLKNS ESKLFSLLNT FSFQHRVLLT GTPLQNNIGE MYNLLNFLQP SSFPSLSSFE
0901: EKFHDLTSAE KVEELKKLVA PHMLRRLKKD AMQNIPPKTE RMVPVELSSI QAEYYRAMLT KNYQILRNIG KGVAQQSMLN IVMQLRKVCN HPYLIPGTEP
1001: ESGSLEFLHD MRIKASAKLT LLHSMLKVLH KEGHRVLIFS QMTKLLDILE DYLNVEFGPK TFERVDGSVA VADRQAAIAR FNQDKNRFVF LLSTRACGLG
1101: INLATADTVI IYDSDFNPHA DIQAMNRAHR IGQSKQLLVY RLVVRASVEE RILQLAKKKL MLDQLFVNKS GSQKEFEDIL RWGTEELFND SAGANKKDTS
1201: ESNGNLDVIM DLESKSRKKG GGLGDVYQDK CTDGNGKIVW DETAIMKLLD RTNIQSPSTD GADTELENDM LGSVKPVEWN EETAEEQVGA ESPPLVADDT
1301: DEHSSERKDD DVVTFTEEND WDRLLRMRWK RYQSEEEATL GRGKRLRKAV SYREAYAPNT SGAVVEDGGE DEKEPELKKE YTPAGRALKD KFTKLRERQK
1401: NRLAKRNAVE DSIPNGNVDQ VTEAANQDEE SPVMMDVDDS QQCDAQKRKS RPLRLDGSSD PTPDLPSQHL NGAECPPSLP PNNLPVLGLC APNFTQPEPS
1501: RRNYSRPSSR QNRTIPGPHF PFSLPQRSGS VEREVNNQEP SMGNLKPHNV KEEPSQQPLS NMDGWLPVRP FPPSGDFERP RSSGAALAEF QEKFPLLNLP
1601: FDDKLLPRFP FQQRNMGTSH QEIMANLSLR KRFEGSGHSM QDLFSMPPMP FLPNMKVPPV DPPVFSQQEE LPPLGLDQFS SALSSIPENH RKVLENIMLR
1701: TGSGLGHLQK KKTRVDAWSE DELDSLWIGI RRHGYGNWET ILRDPRLKFS KFKSPEYLAA RWEEEQRKFL DSLSSLPSKS SRTDKSTKTP LFPGLPQGIM
1801: NRALHGTKYA TPPRFQSHLT DIKLGFNDLA STLPLFESSN HLGLRSEPFP PLDLSGDPSA GPSNTPSDKP FPLNSLGMGN LGSLGLDSLS SLNTQRTDER
1901: RDAIKRGKLP LFLDMQLPPM LDSSNNVFLG RSANPSLLDP NRVMNLSNPM GKDVLGGTSS SENKLPHWLR DAVTVPAAKS PEPPTLPPTV SAIAQSVRVL
2001: YGKDSTTIPP FVIPEPPPPV PRDPRHSLRK KKKRKSRPSS QMTTGIASSS HNVAESSSQG NPPTPPLLPP SLSGEPSGSS QANLPHQNLN ITEPSSSEPI
2101: RVQAPQEDYV VAAEPSEVPK PSLEEVTGTS RSVSPEHKIS EPKSTNEDGD SDLETCEKNE ADQLMIHSDD KHLDVKQENQ QSENASNKQC EPTEAETPNT
2201: DTEQEDNEES IKMVIDISPG DD
Best Arabidopsis Sequence Match ( AT5G44800.1 )
(BLAST)
0001: MKDSGSEMIK RDWVMKQKRR KLPSILDILD QKVDSSMAFD SPEYTSSSKP SKQRLKTDST PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
Arabidopsis Description
CHR4PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.