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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014977_P002 Maize nucleus 94.53 92.7
TraesCS6B01G048200.2 Wheat nucleus, plastid 80.06 76.83
TraesCS6A01G034200.2 Wheat nucleus, plastid 80.2 76.79
HORVU6Hr1G006050.1 Barley plastid 79.92 76.56
TraesCS6D01G039800.1 Wheat nucleus, plastid 79.87 76.55
GSMUA_Achr1P24350_001 Banana nucleus 59.31 59.01
VIT_15s0046g02290.t01 Wine grape plastid 62.42 58.51
GSMUA_AchrUn_... Banana nucleus, plastid 60.4 57.47
GSMUA_AchrUn_... Banana nucleus 57.71 57.04
KRH48113 Soybean nucleus 58.98 56.2
KRH06623 Soybean nucleus 57.99 55.83
KRH00799 Soybean nucleus 57.52 54.91
CDX95673 Canola cytosol 25.46 54.88
Solyc01g094800.2.1 Tomato nucleus 57.71 54.74
Bra000409.1-P Field mustard plastid 55.68 54.63
KRH40427 Soybean nucleus 57.19 54.59
CDX83383 Canola nucleus, plastid 54.79 54.43
AT2G46020.3 Thale cress plastid 56.2 54.35
CDY37083 Canola plastid 53.94 54.24
CDY27338 Canola nucleus, plastid 53.61 54.04
Bra039296.1-P Field mustard plastid 54.31 53.91
CDY71637 Canola nucleus 17.59 50.41
CDX95672 Canola plastid 24.8 48.7
EER97913 Sorghum cytosol 11.41 31.11
EES19009 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 16.22 30.52
EER93549 Sorghum cytosol 11.32 28.71
KXG32501 Sorghum nucleus 13.11 25.11
OQU93492 Sorghum cytosol 9.67 22.6
KXG33813 Sorghum nucleus 11.6 21.35
KXG26914 Sorghum nucleus 9.48 20.7
OQU92590 Sorghum nucleus 12.64 19.07
KXG19483 Sorghum cytosol 11.36 18.2
KXG36860 Sorghum nucleus 13.48 16.56
OQU85588 Sorghum nucleus 13.3 13.91
KXG36264 Sorghum nucleus 13.15 12.54
OQU76185 Sorghum nucleus 19.14 10.03
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300UniProt:A0A1Z5RKU0InterPro:BRM
InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003682GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006355GO:GO:0006412GO:GO:0006950GO:GO:0008094GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009653GO:GO:0009987GO:GO:0010199
GO:GO:0016043GO:GO:0016787GO:GO:0019538GO:GO:0040029GO:GO:0043044GO:GO:1900036
GO:GO:1903798InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487InterPro:IPR001650
InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718EnsemblPlants:OQU84199ProteinID:OQU84199
ProteinID:OQU84199.1InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF08880PFscan:PS51192
PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297SMART:SM00487
SMART:SM00490SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NEnsemblPlantsGene:SORBI_3004G009600SUPFAM:SSF47370
SUPFAM:SSF52540UniParc:UPI000B8BA704SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:-:820003..829151
Molecular Weight (calculated)
237882.0 Da
IEP (calculated)
9.333
GRAVY (calculated)
-0.817
Length
2121 amino acids
Sequence
(BLAST)
0001: MMHHHEQQQA FQSGAPHAMM GPGGVSFPQS SGPVSPFQGQ RNLPMSGGPQ GMVGGQVHNQ VAMQQQFLKL AMQQQQQKAA QGMLLQQQQA KMNMVGSSSR
0101: DQDMLNNPAK MQELMALHQA QAQAQMFKRQ CEQKEQGQSS SSEQRSGDMR PPMPPQGVPG QQLPSMGMIR PMQPVQGQVG MGSAGGGPIT PAQFQAIQAW
0201: AKEHNFDLSN PANMSAISQL LPIWQANRMA AMQKQNEANM AAQQQAMPSQ VNSDTPGHGN APSQGALLKP RQPLPPSSVS GGEEAKVVNP SNLQLQQQLS
0301: VHNRDGSNER AVRSPMTGGN SAQTMHIPQS SGHVSKVPEQ SNPKNVLSNS EAMQMQHVRQ MQQLNQPAAP TSTPGEAGGS QVSTPSARPQ TGQTGFTKNQ
0401: LHVLKAQILA FRRLKRGDRL PPEVLELIVS GRPPDSQGGP QQVSGPQATH NREKPGVSNA DEHGRQMESG DKAPEKPALL KGPCLPKVEV SASEDKASPA
0501: SGPGPMQVMK ASPKEPLKIG PVSVPEHSNT TVIKSEQELE RSIQRTPGRS DYNAERGKSV PAESGSADAE QAKRTGSTSS APAPRDVPRK YHGPLFDFPS
0601: FTRRHDSMGP ANYNSNLSLG YDVKDLLAQE GMIVLGKKRE DNLKKISGLL AINLERKRIR PDLVLRLQIE EKKLKLLEHQ ARLRDEVEHE QQEIMAMPDR
0701: IYRKFVRQCE RQRVELARQV QQMQRASREK QLKSIFQWRK KLLEAHWAIR DARITRNRGV AKYHERMLRE FSKKKDDDRN KRMEALKNND VERYRQILLE
0801: QQTSVPGDAA QRYNVLSSFL TQTEEYLYKL GGKITAAKSQ QQVEEAANAA AAAARAQGLS EEEVKAAAQC AGQEVMIRNT FSEMNAPRDN TSVNKYYTLA
0901: HAVSERVTKQ PSLLRAGTLR DYQLVGLQWM LSLYNNKLNG ILADEMGLGK TVQVMALIAY LMEFKGNYGP HLIIVPNAVL VNWKSELLNW LPSASCIFYV
1001: GAKDQRQKLF SQEVMAMKFN VLVTTYEFVM FDRSKLSRVD WKYIIIDEAQ RMKDRDSVLA RDLDRYRCQR RLLLTGTPLQ NDLKELWSLL NLLLPEVFDS
1101: SKAFSDWFSK PFQRDGPTHS EEEDDWLETE KKVIIIHRLH QILEPFMLRR RVEDVEGSLP RKDSIVLRCR MSAVQGAIYD WIKSTGTIRV DPEDEKRRAQ
1201: RNPMYQVKTY KNLNNKCMEL RKVCNHPLLT YPFLNHGKDF MIRSCGKLWN LDRILIKLHK AGHRVLLFST MTKLLDIMED YLQWRRLVYR RIDGTTSLED
1301: RESAIVDFNR PGSDCFIFLL SIRAAGRGLN LQSADTVVIY DPDPNPQNEE QAVARAHRIG QTREVKVIYM EAVVDNISSY QKEDELRNGG SADLEDDLAG
1401: KDRYMGSIES LIRNNIQQYK IDMADEVINA GRFDQRTTHE ERRMTLETLL HDEERYQDSV HDVPSLQEVN RMIARTESEV ELFDQMDEDF DWTGDMTKHH
1501: QIPKWLRVNS TEVDAVVASL SKKPSRNMSS GGIALDTNET PEKRRGRPKG TGKYSIYREI DDEDLEESDE DSEERNTASL PEEGEVGEFE DEDNDDSIPD
1601: NKDESEEEPV NDDVYEFTEG LRSRKANRME EAGSTGSSSG SRRLPPPVPS SSSKKLRSLS ALDARPVSSS KRTPDDLEEG EIAMSGDSHM DLQQSGSWNH
1701: ERDDGEDEQV LQPKIKRKRS IRLRPKPNAE KQEDRSGEGV FPQHAARQQD TVHPIVKQKR NMPSRKVSPA SRSGKLTYMS GSGEGSAERS KENWNSKAID
1801: STPPEFRGTK MSDSMQRKCK NVISKLWRRI DKEGHQIIPN ISSWWRRNEN SSFRGPAGST LDLQKIEQRV DGFEYGAVTE FIADMQQMLK SVVQHFSYRH
1901: EVRIEAETLH NLFFNIMKIA FPDSDFSEAK NAMSFSNPGG AASGAAAQSS KHTASVHKRR ASASEAEQHG SGHSRHNQSS EVPSRPHSSR SERDPRHSGS
2001: SSRDQLQDGA GLLHPSDMFI VKKKRQDRAR SSIGSPSSSG RAGPLSPANP GRPGPVPSPR GARTPFQRDP HPSQQSMHSA GWGAHSDQGG SSSAPGIGDI
2101: QWAKPAKRLR TDSGKRRPSL M
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.