Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
  • peroxisome 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G039800.1 Wheat nucleus, plastid 98.42 98.51
TraesCS6B01G048200.2 Wheat nucleus, plastid 97.92 98.14
HORVU6Hr1G006050.1 Barley plastid 95.12 95.17
OQU84199 Sorghum nucleus 76.79 80.2
Zm00001d014977_P002 Maize nucleus 76.98 78.83
VIT_15s0046g02290.t01 Wine grape plastid 59.86 58.59
GSMUA_AchrUn_... Banana nucleus, plastid 58.51 58.14
GSMUA_Achr1P24350_001 Banana nucleus 55.89 58.07
Solyc01g094800.2.1 Tomato nucleus 56.12 55.59
KRH48113 Soybean nucleus 55.8 55.53
GSMUA_AchrUn_... Banana nucleus 53.77 55.5
Bra000409.1-P Field mustard plastid 54.04 55.37
CDX83383 Canola nucleus, plastid 53.23 55.22
KRH00799 Soybean nucleus 55.35 55.18
KRH06623 Soybean nucleus 54.81 55.11
KRH40427 Soybean nucleus 55.21 55.04
CDY27338 Canola nucleus, plastid 52.19 54.94
CDY37083 Canola plastid 52.28 54.91
AT2G46020.3 Thale cress plastid 54.27 54.81
Bra039296.1-P Field mustard plastid 52.69 54.61
CDX95673 Canola cytosol 24.11 54.27
CDX95672 Canola plastid 24.79 50.83
CDY71637 Canola nucleus 16.98 50.81
TraesCS1A01G087900.1 Wheat nucleus 15.03 36.84
TraesCS7A01G074600.1 Wheat cytosol 10.2 30.09
TraesCS2A01G368200.1 Wheat cytosol 10.38 29.52
TraesCS4A01G261000.1 Wheat cytosol 10.84 28.64
TraesCS4A01G372200.1 Wheat cytosol, endoplasmic reticulum, nucleus 10.56 26.83
TraesCS1A01G091100.1 Wheat nucleus 12.73 25.5
TraesCS5A01G541400.1 Wheat cytosol 9.48 23.81
TraesCS3A01G069900.2 Wheat nucleus 12.14 23.81
TraesCS2A01G403300.2 Wheat cytosol, nucleus 8.98 22.9
TraesCS3A01G408500.1 Wheat nucleus 10.7 20.61
TraesCS7A01G147100.2 Wheat nucleus 10.97 17.88
TraesCS4A01G147000.1 Wheat nucleus 11.96 17.71
TraesCS2A01G128400.1 Wheat nucleus 12.91 16.55
TraesCS7A01G544700.1 Wheat nucleus 12.6 12.94
TraesCS2A01G227900.1 Wheat nucleus 12.73 12.56
TraesCS7A01G203600.1 Wheat nucleus 18.06 11.8
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:BRMInterPro:Bromodomain
InterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003682GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006139
GO:GO:0006355GO:GO:0006412GO:GO:0006950GO:GO:0008094GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009628GO:GO:0009653GO:GO:0009987GO:GO:0010199GO:GO:0016043
GO:GO:0016787GO:GO:0019538GO:GO:0040029GO:GO:0043044GO:GO:1900036GO:GO:1903798
InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487InterPro:IPR001650InterPro:IPR014001
InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271
PFscan:PS51192PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297
SMART:SM00487SMART:SM00490SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370
SUPFAM:SSF52540EnsemblPlantsGene:TraesCS6A01G034200EnsemblPlants:TraesCS6A01G034200.2TIGR:cd00046TIGR:cd00079SEG:seg
Description
No Description!
Coordinates
chr6A:-:16562503..16573593
Molecular Weight (calculated)
247773.0 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.879
Length
2215 amino acids
Sequence
(BLAST)
0001: MQPGGAPSGS SPASSPRPEQ PATASQQQQA QHLGFARNQA MMQQQQQQQQ SYQAGMPHGM MGGGGGFPQS SGPMGPFQGQ RGLPQPGGPQ GLVAGQQYNQ
0101: STMQQQAYMQ FLMQQQKSHG MQLQQQQQQA KMNMAGPSTR GDQDAAANPV KMQELMSLQA QAQAQAQAQA QAQAQAQAQA QMLKRQSEHL QQAEKQPEQG
0201: QRAGSSEQRS GDMRPPMPPQ GIPGQQMPSA GMVRPMQPMQ GQVGMASMGG IPLQAIHAWA KEQKIDLSDP ANASLISQII PIWQSRMAAM QKQNTTNMAA
0301: QQQQQQQQQQ QQQQQQQQQQ QQQQNQQMLP RQVNSDAPVN GNNPGQAPLK PRQPPLPSSS VSAGAETKMA NPSNLQMQQQ FSAQSSNERA VRPPMTMGNA
0401: GQMMHMTQSS GHGNKISEQP NPKNTLASSE AMQLQYARQL QQANRATAPT ATPGETGGSQ APTQGGRPNS NFTKHQLHVL KAQILAFRRL KRGDRTLPPE
0501: VLELIMSPPP LPDPQTQLVS GPPVIPNRER AASVNADEQG RPMESGDKAP EKPLLLKGPS LPKPEVSASE EKTGSASGPM QVTEVPPKEP LRILPVSAPE
0601: QSNTAPIKSE QEPERGIQRT PGRSDYSGER GKSVPTDSGS ADAEQAKRAA STSSAPSPRD VPRKYHGPLF DFPSFTRKHD SMPPANYNGS LALGYDMKDL
0701: LAQEGMMVLG KKREDNLKKI SGLLSINLER KRIRPDLVLR LQIEEKKLKL LERQARMRDE VEEVQQEIMA MPDRIYRKFV KQCERQRVEL IRQVHQMQKA
0801: SREKQLKSIF QWRKKLLEAH WAIRDARITR NRGVAKYHER MLREFSKKKD DDRSKRMEAL KNNDVERYRQ ILLEQQTSVP GDAAQRYNVL SSFLSQTEEY
0901: LYKLGGKITA TKNQQQVEEA ANAAAAAARA QGLSEEEVKA AAQCAGQEVM IRNTFSEMNA PREENASVNK YYMLAHAVTE KVTKQPSLLR LGTLRDYQLV
1001: GLQWMLSLYN NKLNGILADE MGLGKTVQVM ALIAYLMEFK GNYGPHLIIV PNAVLVNWKS ELLNWLPSAS CIFYVGAKDQ RQKLFSQEVL AVKFNVLVTT
1101: YEFVMFDRSK LSRIDWKYII IDEAQRMKDR ESVLARDLDR YRCQRRLLLT GTPLQNDLKE LWSLLNLLLP EVFDNRKAFQ DWFSKPFQRD APTPNEEDDW
1201: LETEKKVIII HRLHQILEPF MLRRRVEDVE GSLPRKDSIV LRCKMSAIQG AIYDWIKSTG TIRVDPEDEK IRIQRNPMYQ AKTYKNLQNK CMELRKVCNH
1301: PLLSYPFMNY YGKDFIIRSC GKLWNLDRIL IKLHRSGHRV LLFSTMTKLL DILEDYLQWR QLAYRRIDGT TSLEDRESAI VDFNRPGSEC FIFLLSIRAA
1401: GRGLNLQSAD TVVIYDPDPN PQNEEQAVAR AHRIGQTREV KVIYMEAVVD NISSYHKEDE LRNGGSGDLE DDLAGKDRYM GSIESLIRNN IQQYKIDMAD
1501: EVINAGRFDQ RTTHEERRMT LETLLHDEER YQESLHDVPS LQEVNRMIAR TEEEVELFDQ MDEEFDWTGD MMKHNQVPKW LRVGSTDVDC VVASLTKKPA
1601: RNASGSAPDN GDKLEKRRGR PTGSGKYSIY REYEDEDDEE SEEDDEERNT PSHPEEEAGE SEEEEENDDS VPDDDNKDQS EEEEPNNDDG YDLQQGTGSG
1701: KGHKSEEAGS TGSSSGSRRL PPPAPSSSLK KLRSLSALDS RPGTFSKRTS DDLEDGEIAL SGDSHMDLQQ SGSWNHDRDD GEDEQVLQPK IKRKRSLRTR
1801: PRPSTDKQED RSGADGTFPQ RGARLLFPGD GDYDSQQDAH ALADPTSRQQ DTVHPVVKQK RNMPSVKASP ASRAAKSTHL SGSGEGSAEH SKQNWSNKVI
1901: NSAGTKMSDS MQRKCKNVIS KLWRRIGKEG HQKIPNIASW WRRNENSSSK GVAGSTLDLQ KIELRVDGLE YSGVAEFIAD MQQMLKSVVQ HFGYRHEVRV
2001: EAEILHNLFF NIMKIAFPDS DFQEVKDSLS FSNPGGGASS AAVPSAKHLA SGLKRRSATT EVEQHGPGSG KHSHHASAGE APSRAKPERD SRHSGPGSRD
2101: QSLDSPGLPL HPGDLFIAKK KRQDRARSSI GSPSSSGPRG PLSPTNTGRL GPAPSPRGAR TPFQRDSHPS QQSMPGWGAH SDRGGSSPPG IGDIHWAKPA
2201: KRQRTDTGKR RPSHL
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.