Factsheet for TraesCS7D01G069700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G074600.1	Wheat	cytosol	93.07	96.54
TraesCS4A01G372200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	96.92	86.58
TraesCS4D01G053600.2	Wheat	cytosol	85.11	79.4
EER97913	Sorghum	cytosol	75.61	75.71
TraesCS2D01G365000.1	Wheat	cytosol	79.59	75.52
EER93549	Sorghum	cytosol	78.82	73.44
Zm00001d007978_P003	Maize	cytosol	74.2	73.35
Os03t0722400-01	Rice	cytosol	79.2	72.67
Zm00001d033827_P006	Maize	cytosol	78.95	72.52
Os09t0442700-01	Rice	cytosol	78.18	72.07
VIT_04s0023g01610.t01	Wine grape	cytosol	64.96	66.67
PGSC0003DMT400040011	Potato	cytosol	64.44	66.58
GSMUA_Achr3P26090_001	Banana	cytosol	64.7	66.4
PGSC0003DMT400038561	Potato	cytosol	64.06	65.66
Solyc02g062780.2.1	Tomato	cytosol	63.29	63.94
CDX81370	Canola	cytosol	62.26	63.32
KRH76800	Soybean	cytosol	61.87	63.25
KRH28662	Soybean	cytosol	61.87	63.17
Bra012099.1-P	Field mustard	cytosol	62.52	63.16
CDY57125	Canola	cytosol	62.0	63.05
CDY53848	Canola	cytosol	62.39	63.03
AT5G66750.1	Thale cress	cytosol	61.62	62.83
CDY30755	Canola	cytosol	62.39	62.79
Solyc02g085390.2.1	Tomato	cytosol	64.06	61.53
Bra037150.1-P	Field mustard	nucleus	62.0	40.28
TraesCS1D01G099600.1	Wheat	nucleus	34.27	24.12
TraesCS3D01G068900.1	Wheat	nucleus	34.27	23.82
TraesCS2D01G400400.1	Wheat	cytosol	25.55	22.64
TraesCS1D01G089200.2	Wheat	nucleus	32.35	22.16
TraesCS4D01G364600.1	Wheat	cytosol, mitochondrion	23.23	20.52
TraesCS3D01G403600.1	Wheat	nucleus	27.09	17.18
TraesCS7D01G148900.4	Wheat	nucleus	27.86	15.44
TraesCS4D01G159900.1	Wheat	nucleus	28.24	14.73
TraesCS2D01G130900.1	Wheat	nucleus	30.81	13.89
TraesCS6D01G039800.1	Wheat	nucleus, plastid	29.78	10.48
TraesCS7D01G531100.1	Wheat	nucleus	28.88	10.36
TraesCS2D01G234200.1	Wheat	nucleus	27.47	9.52
TraesCS7D01G206700.2	Wheat	nucleus	31.07	7.19

Protein Annotations

MapMan:12.5.2.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR038718	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194
PANTHER:PTHR10799	PANTHER:PTHR10799:SF812	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N
SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7D01G069700	EnsemblPlants:TraesCS7D01G069700.1	TIGR:cd00046	TIGR:cd00079	SEG:seg

Description

No Description!

Coordinates

chr7D:-:40449510..40455468

Molecular Weight (calculated)

87948.9 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.426

Length

779 amino acids

Sequence
(BLAST)

001: MVVAVANAAA ATTTAVTAAA ADAGSPVSVL EDETMSEAKD ERSAGDSKLE ATEDQLLNSV REDGDAGLLV MEVMAKEEEE LYQARLKAEQ EEEARKREAR
101: KAFDPNERFS KLDELLTKTQ LFSEFLLERM EQITDKAVEV KDEEEPVEEQ KKGRGRKRKA KAKPKYNDKK AKTAVAAMLT RSPEDRTADD STLTEEERWE
201: KEQASLVPLL TGGKLKSYQI KGIKWLISLW QNGLNGILAD QMGLGKTIQT IGFLAHLKGN GMDGPYMVIA PLSTLSNWLN ELSRFAPSLI GLIYHGDKVA
301: RAELRRKFMP KKVGPDFPII ITSFEMAMFD AKLLANYQWK YVVVDEGHRL KNTNCKLLRE LRRIPMENKL LLTGTPLQNN LAELWSLLNF ILPDIFSSHQ
401: EFESWFDFSG KGDGEQQEET DENKRVLVVS KLHAILRPFL LRRMKEDVEH MLPRKKEIII YANMTEHQKQ IQNHLVERTF DNYLHENTDI VLRRPGIKTK
501: LNNLLIQLRK NCGHPDLLDA AFDTSYFYPP VEKLLEQCGK FQLLDRLLDA LLKRNHKVLI FSQWTKVLDI LDYYLDTKGL KVCRIDGNVK LEDRRKQIAE
601: FNDLNSGLNV FILSTRAGGL GINLTSADTC ILYDSDWNPQ MDLQAMDRCH RIGQTKPVHV YRLATSNSVE GRIIKRAFGK LKLEHVVIGK GQFQQDAAKP
701: NALDEAELLA LLRDEQGEED RMIQTDISDK DLLKVMDRSD LTGPAAAANS APLVPLKGPG WEVVLASKSG GGMLSALTS

Best Arabidopsis Sequence Match ( AT5G66750.1 )
(BLAST)

001: MVSLRSRKVI PASEMVSDGK TEKDASGDSP TSVLNEEENC EEKSVTVVEE EILLAKNGDS SLISEAMAQE EEQLLKLRED EEKANNAGSA VAPNLNETQF
101: TKLDELLTQT QLYSEFLLEK MEDITINGIE SESQKAEPEK TGRGRKRKAA SQYNNTKAKR AVAAMISRSK EDGETINSDL TEEETVIKLQ NELCPLLTGG
201: QLKSYQLKGV KWLISLWQNG LNGILADQMG LGKTIQTIGF LSHLKGNGLD GPYLVIAPLS TLSNWFNEIA RFTPSINAII YHGDKNQRDE LRRKHMPKTV
301: GPKFPIVITS YEVAMNDAKR ILRHYPWKYV VIDEGHRLKN HKCKLLRELK HLKMDNKLLL TGTPLQNNLS ELWSLLNFIL PDIFTSHDEF ESWFDFSEKN
401: KNEATKEEEE KRRAQVVSKL HGILRPFILR RMKCDVELSL PRKKEIIMYA TMTDHQKKFQ EHLVNNTLEA HLGENAIRGQ GWKGKLNNLV IQLRKNCNHP
501: DLLQGQIDGS YLYPPVEEIV GQCGKFRLLE RLLVRLFANN HKVLIFSQWT KLLDIMDYYF SEKGFEVCRI DGSVKLDERR RQIKDFSDEK SSCSIFLLST
601: RAGGLGINLT AADTCILYDS DWNPQMDLQA MDRCHRIGQT KPVHVYRLST AQSIETRVLK RAYSKLKLEH VVIGQGQFHQ ERAKSSTPLE EEDILALLKE
701: DETAEDKLIQ TDISDADLDR LLDRSDLTIT APGETQAAEA FPVKGPGWEV VLPSSGGMLS SLNS

Arabidopsis Description

DDM1ATP-dependent DNA helicase DDM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.